RNA–Protein interactions for RNA: ENST00000491761.1

SNED1-211, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best)

Gene SNED1, Length 4,125 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-211ENST00000491761 SUSD4Q5VX71 490 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 TRIM75PA6NK02 468 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 MYO1BO43795 1136 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 KRT18P05783 430 aaKnown RBP12.23□□□□□ -0.45
SNED1-211ENST00000491761 CASQ1P31415 396 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 PPARDQ03181 441 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 FEZ1Q99689 392 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 STK36Q9NRP7 1315 aa12.23□□□□□ -0.45
SNED1-211ENST00000491761 PPARAQ07869 468 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 ZNF654Q8IZM8 581 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 ZNF710Q8N1W2 664 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 LCORLQ8N3X6 602 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 CCDC12Q8WUD4 166 aaPredicted RBP12.22□□□□□ -0.45
SNED1-211ENST00000491761 CDCA7Q9BWT1 371 aaPredicted RBP12.22□□□□□ -0.45
SNED1-211ENST00000491761 KCPQ6ZWJ8 1503 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 C6orf229H3BNL8 230 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 SNAP23O00161 211 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 IFIT1BQ5T764 474 aaKnown RBP12.22□□□□□ -0.45
SNED1-211ENST00000491761 RESP18Q5W5W9 173 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 ZNF34Q8IZ26 560 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 ERO1AQ96HE7 468 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 CABP5Q9NP86 173 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 POLR2DO15514 142 aaKnown RBP12.22□□□□□ -0.45
SNED1-211ENST00000491761 CDR1P51861 262 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 PPP2R5BQ15173 497 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 SYT10Q6XYQ8 523 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 FANCBQ8NB91 859 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
SNED1-211ENST00000491761 SENP2Q9HC62 589 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 PCDHA5Q9Y5H7 936 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 RIC1Q4ADV7 1423 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 UBN2Q6ZU65 1347 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 CCZ1BP86790 482 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 CCZ1P86791 482 aaPredicted RBP12.22□□□□□ -0.45
SNED1-211ENST00000491761 SHC4Q6S5L8 630 aa12.22□□□□□ -0.45
SNED1-211ENST00000491761 USP27XA6NNY8 438 aa12.21□□□□□ -0.45
SNED1-211ENST00000491761 CTIFO43310 598 aaKnown RBP12.21□□□□□ -0.45
SNED1-211ENST00000491761 BMP15O95972 392 aa12.21□□□□□ -0.45
SNED1-211ENST00000491761 MMP1P03956 469 aa12.21□□□□□ -0.45
SNED1-211ENST00000491761 POSTNQ15063 836 aa12.21□□□□□ -0.45
SNED1-211ENST00000491761 FOXP1Q9H334 677 aaPredicted RBP12.21□□□□□ -0.45
SNED1-211ENST00000491761 PARP4Q9UKK3 1724 aaKnown RBP12.21□□□□□ -0.45
SNED1-211ENST00000491761 PSDA5PKW4 1024 aaPredicted RBP12.21□□□□□ -0.45
SNED1-211ENST00000491761 GSG1L2A8MUP6 293 aa12.21□□□□□ -0.45
SNED1-211ENST00000491761 KIF5CO60282 957 aa12.21□□□□□ -0.45
SNED1-211ENST00000491761 CRKLP46109 303 aaKnown RBP12.21□□□□□ -0.45
SNED1-211ENST00000491761 CHRNDQ07001 517 aa12.21□□□□□ -0.45
SNED1-211ENST00000491761 VGLL2Q8N8G2 317 aa12.21□□□□□ -0.45
SNED1-211ENST00000491761 MLKLQ8NB16 471 aa12.21□□□□□ -0.45
SNED1-211ENST00000491761 PKD1L3Q7Z443 1732 aa12.21□□□□□ -0.46
SNED1-211ENST00000491761 COL18A1P39060 1754 aa12.21□□□□□ -0.46
SNED1-211ENST00000491761 BMS1Q14692 1282 aaKnown RBP12.21□□□□□ -0.46
SNED1-211ENST00000491761 LONRF3Q496Y0 759 aa12.21□□□□□ -0.46
SNED1-211ENST00000491761 CMTR1Q8N1G2 835 aaKnown RBP12.21□□□□□ -0.46
SNED1-211ENST00000491761 ZNF397Q8NF99 534 aaPredicted RBP12.21□□□□□ -0.46
SNED1-211ENST00000491761 STAG1Q8WVM7 1258 aa12.21□□□□□ -0.46
SNED1-211ENST00000491761 SPEF2Q9C093 1822 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 KRT2P35908 639 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 NCBP1Q09161 790 aaKnown RBP12.2□□□□□ -0.46
SNED1-211ENST00000491761 SLC4A8Q2Y0W8 1093 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 EPB41L4AQ9HCS5 686 aaPredicted RBP12.2□□□□□ -0.46
SNED1-211ENST00000491761 ANKIB1Q9P2G1 1089 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 ZNF215Q9UL58 517 aaPredicted RBP12.2□□□□□ -0.46
SNED1-211ENST00000491761 LAMB4A4D0S4 1761 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 MROH7-TTC4A0A0A0MT08 1334 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 CALM1P0DP23 149 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 CALM2P0DP24 149 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 CALM3P0DP25 149 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 NBPF3Q9H094 633 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
SNED1-211ENST00000491761 FANCLQ9NW38 375 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 SERTAD1Q9UHV2 236 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 ATP1A3P13637 1013 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 TTLL12Q14166 644 aaPredicted RBP12.2□□□□□ -0.46
SNED1-211ENST00000491761 CRACR2BQ8N4Y2 399 aaPredicted RBP12.2□□□□□ -0.46
SNED1-211ENST00000491761 SMARCC1Q92922 1105 aaPredicted RBP12.2□□□□□ -0.46
SNED1-211ENST00000491761 DHX58Q96C10 678 aa12.2□□□□□ -0.46
SNED1-211ENST00000491761 QTRT2Q9H974 415 aaKnown RBP12.2□□□□□ -0.46
SNED1-211ENST00000491761 GOLGA6L9A6NEM1 432 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 GOLGA6L10A6NI86 522 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 APBA3O96018 575 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 FGFR2P21802 821 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 STIM1Q13586 685 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 SOGA3Q5TF21 947 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 SDR42E1Q8WUS8 393 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 RBM28Q9NW13 759 aaKnown RBP12.19□□□□□ -0.46
SNED1-211ENST00000491761 OGFRQ9NZT2 677 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 TUBE1Q9UJT0 475 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 TCRBV5S4A2TA0A5A2 114 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 ATP2C2O75185 946 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 AFMP43652 599 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 ANKRD7Q92527 254 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 PPP1R13BQ96KQ4 1090 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 NUP88Q99567 741 aaPredicted RBP12.19□□□□□ -0.46
SNED1-211ENST00000491761 MTA3Q9BTC8 594 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 RSPH14Q9UHP6 348 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 NFE2L3Q9Y4A8 694 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 TNKSO95271 1327 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
SNED1-211ENST00000491761 SIK1P57059 783 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms