RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 METTL16Q86W50 562 aaKnown RBP16.35■□□□□ 0.21
USF1-206ENST00000491629 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
USF1-206ENST00000491629 TDHQ8IZJ6 230 aa16.35■□□□□ 0.21
USF1-206ENST00000491629 NEUROD6Q96NK8 337 aa16.35■□□□□ 0.21
USF1-206ENST00000491629 TBC1D2Q9BYX2 928 aa16.35■□□□□ 0.21
USF1-206ENST00000491629 PORCNQ9H237 461 aa16.35■□□□□ 0.21
USF1-206ENST00000491629 AKAP2Q9Y2D5 859 aa16.35■□□□□ 0.21
USF1-206ENST00000491629 LDHCP07864 332 aa16.34■□□□□ 0.21
USF1-206ENST00000491629 CCND3P30281 292 aaPredicted RBP16.34■□□□□ 0.21
USF1-206ENST00000491629 HERVK_113P62684 666 aa16.34■□□□□ 0.21
USF1-206ENST00000491629 LRRC26Q2I0M4 334 aa16.34■□□□□ 0.21
USF1-206ENST00000491629 ADGRA1Q86SQ6 560 aa16.34■□□□□ 0.21
USF1-206ENST00000491629 RAI14Q9P0K7 980 aa16.34■□□□□ 0.21
USF1-206ENST00000491629 HERC5Q9UII4 1024 aaKnown RBP16.34■□□□□ 0.21
USF1-206ENST00000491629 STXBP5LQ9Y2K9 1186 aa16.34■□□□□ 0.21
USF1-206ENST00000491629 XRCC5P13010 732 aaKnown RBP16.33■□□□□ 0.2
USF1-206ENST00000491629 GSTO1P78417 241 aa16.33■□□□□ 0.2
USF1-206ENST00000491629 MORN1Q5T089 497 aa16.33■□□□□ 0.2
USF1-206ENST00000491629 API5Q9BZZ5 524 aaKnown RBP16.33■□□□□ 0.2
USF1-206ENST00000491629 PI4KBQ9UBF8 816 aa16.33■□□□□ 0.2
USF1-206ENST00000491629 TNNQ9UQP3 1299 aa16.33■□□□□ 0.2
USF1-206ENST00000491629 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
USF1-206ENST00000491629 GDF11O95390 407 aa16.32■□□□□ 0.2
USF1-206ENST00000491629 IRX3P78415 501 aaPredicted RBP16.32■□□□□ 0.2
USF1-206ENST00000491629 GPRC5AQ8NFJ5 357 aa16.32■□□□□ 0.2
USF1-206ENST00000491629 NUDT12Q9BQG2 462 aa16.32■□□□□ 0.2
USF1-206ENST00000491629 UBE2OQ9C0C9 1292 aaKnown RBP16.32■□□□□ 0.2
USF1-206ENST00000491629 AS3MTQ9HBK9 375 aa16.32■□□□□ 0.2
USF1-206ENST00000491629 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
USF1-206ENST00000491629 AATFQ9NY61 560 aaKnown RBP eCLIP16.32■□□□□ 0.2
USF1-206ENST00000491629 FLT1P17948 1338 aa16.31■□□□□ 0.2
USF1-206ENST00000491629 PNMA6EA0A0J9YXQ4 647 aa16.31■□□□□ 0.2
USF1-206ENST00000491629 CNMDO75829 334 aa16.31■□□□□ 0.2
USF1-206ENST00000491629 ERVK-9P63128 1117 aa16.31■□□□□ 0.2
USF1-206ENST00000491629 ERVK-24P63145 666 aa16.31■□□□□ 0.2
USF1-206ENST00000491629 GPR142Q7Z601 462 aa16.31■□□□□ 0.2
USF1-206ENST00000491629 MAPKAPK5Q8IW41 473 aa16.31■□□□□ 0.2
USF1-206ENST00000491629 TGFBRAP1Q8WUH2 860 aa16.31■□□□□ 0.2
USF1-206ENST00000491629 SNRKQ9NRH2 765 aa16.31■□□□□ 0.2
USF1-206ENST00000491629 ZNFX1Q9P2E3 1918 aaKnown RBP16.31■□□□□ 0.2
USF1-206ENST00000491629 ASNSP08243 561 aa16.3■□□□□ 0.2
USF1-206ENST00000491629 RARSP54136 660 aaKnown RBP16.3■□□□□ 0.2
USF1-206ENST00000491629 PPP4CP60510 307 aa16.3■□□□□ 0.2
USF1-206ENST00000491629 DHX36Q9H2U1 1008 aaKnown RBP16.3■□□□□ 0.2
USF1-206ENST00000491629 FLRT1Q9NZU1 646 aa16.3■□□□□ 0.2
USF1-206ENST00000491629 PALD1Q9ULE6 856 aa16.3■□□□□ 0.2
USF1-206ENST00000491629 ZBTB21Q9ULJ3 1066 aa16.3■□□□□ 0.2
USF1-206ENST00000491629 HDAC5Q9UQL6 1122 aa16.3■□□□□ 0.2
USF1-206ENST00000491629 SMCHD1A6NHR9 2005 aa16.29■□□□□ 0.2
USF1-206ENST00000491629 C19orf81C9J6K1 198 aa16.29■□□□□ 0.2
USF1-206ENST00000491629 USP17L10C9JJH3 530 aa16.29■□□□□ 0.2
USF1-206ENST00000491629 ZKSCAN1P17029 563 aaPredicted RBP16.29■□□□□ 0.2
USF1-206ENST00000491629 MAPK4P31152 587 aa16.29■□□□□ 0.2
USF1-206ENST00000491629 MDM2Q00987 491 aaPredicted RBP16.29■□□□□ 0.2
USF1-206ENST00000491629 SOCS4Q8WXH5 440 aa16.29■□□□□ 0.2
USF1-206ENST00000491629 GUCD1Q96NT3 240 aa16.29■□□□□ 0.2
USF1-206ENST00000491629 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
USF1-206ENST00000491629 TMOD4Q9NZQ9 345 aa16.29■□□□□ 0.2
USF1-206ENST00000491629 LRP2BPQ9P2M1 347 aa16.29■□□□□ 0.2
USF1-206ENST00000491629 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
USF1-206ENST00000491629 CYP2E1P05181 493 aaPredicted RBP16.28■□□□□ 0.2
USF1-206ENST00000491629 GNAI3P08754 354 aa16.28■□□□□ 0.2
USF1-206ENST00000491629 CT47B1P0C2W7 299 aaPredicted RBP16.28■□□□□ 0.2
USF1-206ENST00000491629 GORABQ5T7V8 394 aa16.28■□□□□ 0.2
USF1-206ENST00000491629 PLEKHH3Q7Z736 793 aa16.28■□□□□ 0.2
USF1-206ENST00000491629 COL25A1Q9BXS0 654 aaPredicted RBP16.28■□□□□ 0.2
USF1-206ENST00000491629 PARP14Q460N5 1801 aa16.28■□□□□ 0.2
USF1-206ENST00000491629 IGHA2P01877 340 aa16.27■□□□□ 0.2
USF1-206ENST00000491629 RGS2P41220 211 aa16.27■□□□□ 0.2
USF1-206ENST00000491629 DYNLL1P63167 89 aaKnown RBP16.27■□□□□ 0.2
USF1-206ENST00000491629 NAA16Q6N069 864 aaPredicted RBP16.27■□□□□ 0.2
USF1-206ENST00000491629 FOXP4Q8IVH2 680 aaPredicted RBP16.27■□□□□ 0.2
USF1-206ENST00000491629 ARHGAP45Q92619 1136 aa16.27■□□□□ 0.2
USF1-206ENST00000491629 APBA2Q99767 749 aa16.27■□□□□ 0.2
USF1-206ENST00000491629 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
USF1-206ENST00000491629 SAP30BPQ9UHR5 308 aaKnown RBP16.27■□□□□ 0.2
USF1-206ENST00000491629 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
USF1-206ENST00000491629 UQCRFS1P1P0C7P4 283 aa16.26■□□□□ 0.19
USF1-206ENST00000491629 PDE3AQ14432 1141 aa16.26■□□□□ 0.19
USF1-206ENST00000491629 TRMT44Q8IYL2 757 aaKnown RBP16.26■□□□□ 0.19
USF1-206ENST00000491629 PIH1D3Q9NQM4 214 aaKnown RBP16.26■□□□□ 0.19
USF1-206ENST00000491629 ZNF236Q9UL36 1845 aa16.26■□□□□ 0.19
USF1-206ENST00000491629 MYH8P13535 1937 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 A0A0G2JMZ2 1700 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 TTC28Q96AY4 2481 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 NAV1Q8NEY1 1877 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 GH2P01242 217 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 MAP2K5Q13163 448 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 TRPV1Q8NER1 839 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 C12orf42Q96LP6 360 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 GINM1Q9NU53 330 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 MUC3AQ02505 3323 aa16.25■□□□□ 0.19
USF1-206ENST00000491629 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
USF1-206ENST00000491629 BAG3O95817 575 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 TRIM27P14373 513 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 PLCG2P16885 1265 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 ZAP70P43403 619 aa16.24■□□□□ 0.19
USF1-206ENST00000491629 G3BP1Q13283 466 aaKnown RBP eCLIP16.24■□□□□ 0.19
USF1-206ENST00000491629 ZYXQ15942 572 aaKnown RBP16.24■□□□□ 0.19
USF1-206ENST00000491629 TNNI3KQ59H18 835 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms