RNA–Protein interactions for RNA: ENST00000491390.1

NCSTN-214, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-214ENST00000491390 ZGPATQ8N5A5 531 aaKnown RBP13.71□□□□□ -0.21
NCSTN-214ENST00000491390 ARIH1Q9Y4X5 557 aaPredicted RBP13.71□□□□□ -0.21
NCSTN-214ENST00000491390 TRANK1O15050 2925 aa13.7□□□□□ -0.22
NCSTN-214ENST00000491390 CCND3P30281 292 aaPredicted RBP13.7□□□□□ -0.22
NCSTN-214ENST00000491390 RARSP54136 660 aaKnown RBP13.7□□□□□ -0.22
NCSTN-214ENST00000491390 TRMT44Q8IYL2 757 aaKnown RBP13.7□□□□□ -0.22
NCSTN-214ENST00000491390 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.7□□□□□ -0.22
NCSTN-214ENST00000491390 HMG20BQ9P0W2 317 aa13.7□□□□□ -0.22
NCSTN-214ENST00000491390 GPR75-ASB3A0A0A6YYF3 556 aa13.69□□□□□ -0.22
NCSTN-214ENST00000491390 PEX10O60683 326 aa13.69□□□□□ -0.22
NCSTN-214ENST00000491390 CYP2B6P20813 491 aa13.69□□□□□ -0.22
NCSTN-214ENST00000491390 SOCS4Q8WXH5 440 aa13.69□□□□□ -0.22
NCSTN-214ENST00000491390 FAM163AQ96GL9 167 aaPredicted RBP13.69□□□□□ -0.22
NCSTN-214ENST00000491390 ASCC2Q9H1I8 757 aaPredicted RBP13.69□□□□□ -0.22
NCSTN-214ENST00000491390 PNMA6EA0A0J9YXQ4 647 aa13.68□□□□□ -0.22
NCSTN-214ENST00000491390 CENPBP07199 599 aaPredicted RBP13.68□□□□□ -0.22
NCSTN-214ENST00000491390 SPP2Q13103 211 aa13.68□□□□□ -0.22
NCSTN-214ENST00000491390 MVPQ14764 893 aaKnown RBP13.68□□□□□ -0.22
NCSTN-214ENST00000491390 SHROOM1Q2M3G4 852 aaPredicted RBP13.68□□□□□ -0.22
NCSTN-214ENST00000491390 SPTY2D1Q68D10 685 aaPredicted RBP13.68□□□□□ -0.22
NCSTN-214ENST00000491390 SLF2Q8IX21 1173 aa13.68□□□□□ -0.22
NCSTN-214ENST00000491390 SPATA5Q8NB90 893 aa13.68□□□□□ -0.22
NCSTN-214ENST00000491390 ATXN2LQ8WWM7 1075 aaKnown RBP13.68□□□□□ -0.22
NCSTN-214ENST00000491390 NSUN4Q96CB9 384 aaKnown RBP13.68□□□□□ -0.22
NCSTN-214ENST00000491390 SNRKQ9NRH2 765 aa13.68□□□□□ -0.22
NCSTN-214ENST00000491390 RAI14Q9P0K7 980 aa13.68□□□□□ -0.22
NCSTN-214ENST00000491390 ATAD5Q96QE3 1844 aa13.68□□□□□ -0.22
NCSTN-214ENST00000491390 ZKSCAN1P17029 563 aaPredicted RBP13.67□□□□□ -0.22
NCSTN-214ENST00000491390 MCAMP43121 646 aa13.67□□□□□ -0.22
NCSTN-214ENST00000491390 HMGCS2P54868 508 aa13.67□□□□□ -0.22
NCSTN-214ENST00000491390 GRIN2CQ14957 1233 aa13.67□□□□□ -0.22
NCSTN-214ENST00000491390 CCL14Q16627 93 aa13.67□□□□□ -0.22
NCSTN-214ENST00000491390 GORABQ5T7V8 394 aa13.67□□□□□ -0.22
NCSTN-214ENST00000491390 ADAMTS19Q8TE59 1207 aa13.67□□□□□ -0.22
NCSTN-214ENST00000491390 SH3RF3Q8TEJ3 882 aaPredicted RBP13.67□□□□□ -0.22
NCSTN-214ENST00000491390 CLUAP1Q96AJ1 413 aa13.67□□□□□ -0.22
NCSTN-214ENST00000491390 NUDT12Q9BQG2 462 aa13.67□□□□□ -0.22
NCSTN-214ENST00000491390 SENP6Q9GZR1 1112 aaPredicted RBP13.67□□□□□ -0.22
NCSTN-214ENST00000491390 AKAP2Q9Y2D5 859 aa13.67□□□□□ -0.22
NCSTN-214ENST00000491390 PDS5AQ29RF7 1337 aaKnown RBP13.66□□□□□ -0.22
NCSTN-214ENST00000491390 BCAR3O75815 825 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 GNAI3P08754 354 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 RTP1P59025 263 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 PABPC4Q13310 644 aaKnown RBP eCLIP13.66□□□□□ -0.22
NCSTN-214ENST00000491390 SNX17Q15036 470 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 SH3D19Q5HYK7 790 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 MORN1Q5T089 497 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 TEX11Q8IYF3 940 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 FRAT1Q92837 279 aaPredicted RBP13.66□□□□□ -0.22
NCSTN-214ENST00000491390 ASB2Q96Q27 587 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 OSBPL5Q9H0X9 879 aaPredicted RBP13.66□□□□□ -0.22
NCSTN-214ENST00000491390 TXNRD2Q9NNW7 524 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 HDAC5Q9UQL6 1122 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 RLFQ13129 1914 aa13.66□□□□□ -0.22
NCSTN-214ENST00000491390 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
NCSTN-214ENST00000491390 SIPA1L1O43166 1804 aa13.65□□□□□ -0.22
NCSTN-214ENST00000491390 DNM1LO00429 736 aa13.65□□□□□ -0.22
NCSTN-214ENST00000491390 TBC1D12O60347 775 aa13.65□□□□□ -0.22
NCSTN-214ENST00000491390 CT47B1P0C2W7 299 aaPredicted RBP13.65□□□□□ -0.22
NCSTN-214ENST00000491390 TRIM27P14373 513 aa13.65□□□□□ -0.22
NCSTN-214ENST00000491390 JAG1P78504 1218 aa13.65□□□□□ -0.22
NCSTN-214ENST00000491390 ZNF280CQ8ND82 737 aa13.65□□□□□ -0.22
NCSTN-214ENST00000491390 AATFQ9NY61 560 aaKnown RBP eCLIP13.65□□□□□ -0.22
NCSTN-214ENST00000491390 PRKAG2Q9UGJ0 569 aa13.65□□□□□ -0.22
NCSTN-214ENST00000491390 MYO5AQ9Y4I1 1855 aaKnown RBP13.65□□□□□ -0.22
NCSTN-214ENST00000491390 ZBTB22O15209 634 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 IGHA2P01877 340 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 ARID4AP29374 1257 aaPredicted RBP13.64□□□□□ -0.23
NCSTN-214ENST00000491390 CAP2P40123 477 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 ATN1P54259 1190 aaPredicted RBP13.64□□□□□ -0.23
NCSTN-214ENST00000491390 GSTO1P78417 241 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 MTX1Q13505 466 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 ADGRA1Q86SQ6 560 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 MAPKAPK5Q8IW41 473 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 LPAR1Q92633 364 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 BADQ92934 168 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 APBA2Q99767 749 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 TBC1D2Q9BYX2 928 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 PDLIM7Q9NR12 457 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 LRP2BPQ9P2M1 347 aa13.64□□□□□ -0.23
NCSTN-214ENST00000491390 USP17L5A8MUK1 530 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 GDF11O95390 407 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 GNAI2P04899 355 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 LDHCP07864 332 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 MAPK4P31152 587 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 HOXA7P31268 230 aaPredicted RBP13.63□□□□□ -0.23
NCSTN-214ENST00000491390 RGS2P41220 211 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 G3BP1Q13283 466 aaKnown RBP eCLIP13.63□□□□□ -0.23
NCSTN-214ENST00000491390 MTMR2Q13614 643 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 POTEEQ6S8J3 1075 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 TGFBRAP1Q8WUH2 860 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 UHRF1Q96T88 793 aaPredicted RBP13.63□□□□□ -0.23
NCSTN-214ENST00000491390 DBNDD2Q9BQY9 259 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 C1orf115Q9H7X2 142 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 THEGQ9P2T0 379 aa13.63□□□□□ -0.23
NCSTN-214ENST00000491390 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
NCSTN-214ENST00000491390 SAP30BPQ9UHR5 308 aaKnown RBP13.63□□□□□ -0.23
NCSTN-214ENST00000491390 CDK5RAP2Q96SN8 1893 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 TRIM43BA6NCK2 446 aa13.62□□□□□ -0.23
NCSTN-214ENST00000491390 EPHB4P54760 987 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms