RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	XAGE2	Q96GT9	111 aa		23.8	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	DHX36	Q9H2U1	1008 aa	Known RBP	23.8	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	COPRS	Q9NQ92	184 aa		23.8	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	VCAN	P13611	3396 aa		23.79	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	USP17L10	C9JJH3	530 aa		23.79	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	MFSD14C	Q5VZR4	134 aa		23.79	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	TEX11	Q8IYF3	940 aa		23.79	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	NSUN4	Q96CB9	384 aa	Known RBP	23.79	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	APBA2	Q99767	749 aa		23.79	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334		A0A1B0GUL7	405 aa		23.78	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	GLRX3	O76003	335 aa	Known RBP	23.78	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	EDC3	Q96F86	508 aa	Known RBP	23.78	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	CDX2	Q99626	313 aa	Predicted RBP	23.78	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	PORCN	Q9H237	461 aa		23.78	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	PRDM6	Q9NQX0	595 aa		23.78	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	GINM1	Q9NU53	330 aa		23.78	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	RAI14	Q9P0K7	980 aa		23.78	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	DNAH12	Q6ZR08	3092 aa		23.77	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	MSC	O60682	206 aa		23.77	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	MAP2K5	Q13163	448 aa		23.77	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	FOXP4	Q8IVH2	680 aa	Predicted RBP	23.77	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	NOL10	Q9BSC4	688 aa	Known RBP	23.77	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	PAGR1	Q9BTK6	254 aa		23.77	■■□□□ 1.4
CDK5RAP2-218	ENST00000491334	SPATA5	Q8NB90	893 aa		23.76	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	MAFA	Q8NHW3	353 aa	Predicted RBP	23.76	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	TRIM34	Q9BYJ4	488 aa		23.76	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	SEMA6B	Q9H3T3	888 aa		23.76	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	HMG20B	Q9P0W2	317 aa		23.76	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	ATN1	P54259	1190 aa	Predicted RBP	23.75	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	CCNA1	P78396	465 aa		23.75	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	GORAB	Q5T7V8	394 aa		23.75	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	TBC1D9	Q6ZT07	1266 aa		23.75	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	LPAR1	Q92633	364 aa		23.75	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	NEUROD6	Q96NK8	337 aa		23.75	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	BAG3	O95817	575 aa		23.74	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	CNGA1	P29973	690 aa		23.74	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	23.74	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	LRP2BP	Q9P2M1	347 aa		23.74	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	DDX20	Q9UHI6	824 aa	Known RBP	23.74	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	RABGAP1	Q9Y3P9	1069 aa		23.74	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	TTC28	Q96AY4	2481 aa		23.73	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	DNM1L	O00429	736 aa		23.73	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	ATP2B2	Q01814	1243 aa		23.73	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	TFCP2	Q12800	502 aa		23.73	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	ALDH1L2	Q3SY69	923 aa		23.73	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	USP17L2	Q6R6M4	530 aa		23.73	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	FAM9B	Q8IZU0	186 aa		23.73	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	23.73	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	SYMPK	Q92797	1274 aa	Known RBP	23.73	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	ANP32C	O43423	234 aa		23.72	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	PLCG2	P16885	1265 aa		23.72	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	JAG1	P78504	1218 aa		23.72	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	SHH	Q15465	462 aa		23.72	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	METTL16	Q86W50	562 aa	Known RBP	23.72	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	EMILIN3	Q9NT22	766 aa		23.72	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	ATAD5	Q96QE3	1844 aa		23.71	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	ZNF521	Q96K83	1311 aa		23.71	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	SLC15A5	A6NIM6	579 aa		23.71	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	RTP1	P59025	263 aa		23.71	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	ARRDC4	Q8NCT1	418 aa		23.71	■■□□□ 1.39
CDK5RAP2-218	ENST00000491334	WDR78	Q5VTH9	848 aa		23.7	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	POTEE	Q6S8J3	1075 aa		23.7	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	PI16	Q6UXB8	463 aa		23.7	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	FLRT1	Q9NZU1	646 aa		23.7	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	ZBTB21	Q9ULJ3	1066 aa		23.7	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	ATP11B	Q9Y2G3	1177 aa		23.7	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	USP17L15	C9J2P7	530 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	USP17L13	C9JLJ4	530 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	USP17L11	C9JVI0	530 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	USP17L18	D6R9N7	530 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	USP17L22	D6RA61	530 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	USP17L17	D6RBQ6	530 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	USP17L19	D6RCP7	530 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	USP17L20	D6RJB6	530 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334		E9PSI1	815 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	GDF11	O95390	407 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	PTPRE	P23469	700 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	SMAD3	P84022	425 aa	Known RBP	23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	USP17L24	Q0WX57	530 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	TGFBRAP1	Q8WUH2	860 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	SMC4	Q9NTJ3	1288 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	AATF	Q9NY61	560 aa	Known RBP eCLIP	23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	NDUFB9	Q9Y6M9	179 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	IVNS1ABP	Q9Y6Y0	642 aa		23.69	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	HOXC6	P09630	235 aa		23.68	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	ARID4A	P29374	1257 aa	Predicted RBP	23.68	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	NAA16	Q6N069	864 aa	Predicted RBP	23.68	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	ATF7IP	Q6VMQ6	1270 aa		23.68	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	MAPKAPK5	Q8IW41	473 aa		23.68	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	DNAJC18	Q9H819	358 aa		23.68	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	PRUNE2	Q8WUY3	3088 aa		23.68	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	UQCRFS1P1	P0C7P4	283 aa		23.67	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	PPP4C	P60510	307 aa		23.67	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	SLC39A5	Q6ZMH5	540 aa		23.67	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	MYLIP	Q8WY64	445 aa		23.67	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	PALD1	Q9ULE6	856 aa		23.67	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	EYS	Q5T1H1	3165 aa		23.67	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	SPTBN5	Q9NRC6	3674 aa	Known RBP	23.66	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	SRGAP3	O43295	1099 aa		23.66	■■□□□ 1.38
CDK5RAP2-218	ENST00000491334	CNMD	O75829	334 aa		23.66	■■□□□ 1.38

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