RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 PLAGL2Q9UPG8 496 aa3.01□□□□□ -1.93
SNRNP40-207ENST00000491106 RB1CC1Q8TDY2 1594 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 IGF2BP3O00425 579 aaKnown RBP eCLIP3□□□□□ -1.93
SNRNP40-207ENST00000491106 CENPBP07199 599 aaPredicted RBP3□□□□□ -1.93
SNRNP40-207ENST00000491106 RAC2P15153 192 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 PLCG1P19174 1290 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 GBP1P32455 592 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 HK2P52789 917 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 FZD5Q13467 585 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 MLECQ14165 292 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 ZNF124Q15973 351 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 CLEC16AQ2KHT3 1053 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 PRAMEF13Q5VWM6 474 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 TMEM132EQ6IEE7 984 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 CYFIP1Q7L576 1253 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 ATG4DQ86TL0 474 aaPredicted RBP3□□□□□ -1.93
SNRNP40-207ENST00000491106 CREG2Q8IUH2 290 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 NPAS4Q8IUM7 802 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 MFSD4AQ8N468 514 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 LRRN4CLQ8ND94 238 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 RIN3Q8TB24 985 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 CCDC120Q96HB5 630 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 ASCC2Q9H1I8 757 aaPredicted RBP3□□□□□ -1.93
SNRNP40-207ENST00000491106 ATP13A1Q9HD20 1204 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 MBNL3Q9NUK0 354 aaKnown RBP3□□□□□ -1.93
SNRNP40-207ENST00000491106 FAM53CQ9NYF3 392 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 TLR6Q9Y2C9 796 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 PCDHGC5Q9Y5F6 944 aa3□□□□□ -1.93
SNRNP40-207ENST00000491106 SORBS3O60504 671 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 SLITRK5O94991 958 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 EOMESO95936 686 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 MCM4P33991 863 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 ETV3P41162 512 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 CDK8P49336 464 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 LIG3P49916 1009 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 YARSP54577 528 aaKnown RBP2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 NKG7Q16617 165 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 SNAP47Q5SQN1 464 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 MEI1Q5TIA1 1274 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 RASIP1Q5U651 963 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 SND1Q7KZF4 910 aaKnown RBP eCLIP2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 UBE3DQ7Z6J8 389 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 TTC6Q86TZ1 520 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 PHACTR4Q8IZ21 702 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 FAM13CQ8NE31 585 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 KIRREL1Q96J84 757 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 FMNL2Q96PY5 1086 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 DIRC2Q96SL1 478 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 FBRSQ9HAH7 460 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 RNF19AQ9NV58 838 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 SLAMF8Q9P0V8 285 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 KLHL3Q9UH77 587 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 KCNH3Q9ULD8 1083 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 MAPK8IP1Q9UQF2 711 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 NACADO15069 1562 aa2.99□□□□□ -1.93
SNRNP40-207ENST00000491106 PRR33A8MZF0 331 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 GRIN3BO60391 1043 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 C8AP07357 584 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 TMEM253P0C7T8 217 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 LTKP29376 864 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 CLCN7P51798 805 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 FAM160A1Q05DH4 1040 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 NKPD1Q17RQ9 610 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 CCDC27Q2M243 656 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 ZNF326Q5BKZ1 582 aaKnown RBP2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 SLC6A19Q695T7 634 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 SCARA3Q6AZY7 606 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 ZSWIM9Q86XI8 627 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 TMEM40Q8WWA1 233 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 KCNN1Q92952 543 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 LIN37Q96GY3 246 aaPredicted RBP2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 TMEM87BQ96K49 555 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 TRIT1Q9H3H1 467 aaKnown RBP2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 GPATCH2Q9NW75 528 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 LMCD1Q9NZU5 365 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 ADAMTS6Q9UKP5 1117 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 U3KQE9 123 aa2.98□□□□□ -1.93
SNRNP40-207ENST00000491106 KRTAP9-6A0A140TA67 174 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 UPK3BL1B0FP48 263 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 UPK3BL2E5RIL1 263 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 NFIBO00712 420 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 TLR3O15455 904 aaKnown RBP2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 CST3P01034 146 aaPredicted RBP2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 PF4P02776 101 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 TPP2P29144 1249 aaPredicted RBP2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 RAP1GAPP47736 663 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 RPS26P62854 115 aaKnown RBP2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 RPL6Q02878 288 aaKnown RBP2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 PWP1Q13610 501 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 SLBPQ14493 270 aaKnown RBP eCLIP2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 COL19A1Q14993 1142 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 AGMOQ6ZNB7 445 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 SYDE1Q6ZW31 735 aaPredicted RBP2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 CBLL1Q75N03 491 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 ANKLE2Q86XL3 938 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 SPACA3Q8IXA5 215 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 ABHD4Q8TB40 342 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 MYLIPQ8WY64 445 aa2.97□□□□□ -1.93
SNRNP40-207ENST00000491106 KRTAP9-2Q9BYQ4 174 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms