RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 TRMT44Q8IYL2 757 aaKnown RBP25.38■■□□□ 1.65
CLIP2-208ENST00000491075 GPRC5AQ8NFJ5 357 aa25.38■■□□□ 1.65
CLIP2-208ENST00000491075 AATFQ9NY61 560 aaKnown RBP eCLIP25.38■■□□□ 1.65
CLIP2-208ENST00000491075 MYO5AQ9Y4I1 1855 aaKnown RBP25.38■■□□□ 1.65
CLIP2-208ENST00000491075 GNAI2P04899 355 aa25.37■■□□□ 1.65
CLIP2-208ENST00000491075 MAPK4P31152 587 aa25.37■■□□□ 1.65
CLIP2-208ENST00000491075 PDE3AQ14432 1141 aa25.37■■□□□ 1.65
CLIP2-208ENST00000491075 METTL16Q86W50 562 aaKnown RBP25.37■■□□□ 1.65
CLIP2-208ENST00000491075 CRACR2BQ8N4Y2 399 aaPredicted RBP25.37■■□□□ 1.65
CLIP2-208ENST00000491075 P2RX7Q99572 595 aaKnown RBP25.37■■□□□ 1.65
CLIP2-208ENST00000491075 TRIM34Q9BYJ4 488 aa25.37■■□□□ 1.65
CLIP2-208ENST00000491075 FLT1P17948 1338 aa25.37■■□□□ 1.65
CLIP2-208ENST00000491075 FRMPD3Q5JV73 1810 aa25.36■■□□□ 1.65
CLIP2-208ENST00000491075 USP17L10C9JJH3 530 aa25.36■■□□□ 1.65
CLIP2-208ENST00000491075 PPP4CP60510 307 aa25.36■■□□□ 1.65
CLIP2-208ENST00000491075 FOXP4Q8IVH2 680 aaPredicted RBP25.36■■□□□ 1.65
CLIP2-208ENST00000491075 GTF3C2Q8WUA4 911 aaPredicted RBP25.36■■□□□ 1.65
CLIP2-208ENST00000491075 TGFBRAP1Q8WUH2 860 aa25.36■■□□□ 1.65
CLIP2-208ENST00000491075 DNAJC18Q9H819 358 aa25.36■■□□□ 1.65
CLIP2-208ENST00000491075 TXNRD2Q9NNW7 524 aa25.36■■□□□ 1.65
CLIP2-208ENST00000491075 ZKSCAN1P17029 563 aaPredicted RBP25.35■■□□□ 1.65
CLIP2-208ENST00000491075 SYN1P17600 705 aa25.35■■□□□ 1.65
CLIP2-208ENST00000491075 MAGEA10P43363 369 aaPredicted RBP25.35■■□□□ 1.65
CLIP2-208ENST00000491075 LRIT3Q3SXY7 679 aa25.35■■□□□ 1.65
CLIP2-208ENST00000491075 MAPKAPK5Q8IW41 473 aa25.35■■□□□ 1.65
CLIP2-208ENST00000491075 PFASO15067 1338 aa25.35■■□□□ 1.65
CLIP2-208ENST00000491075 PNMA6EA0A0J9YXQ4 647 aa25.34■■□□□ 1.65
CLIP2-208ENST00000491075 JAG1P78504 1218 aa25.34■■□□□ 1.65
CLIP2-208ENST00000491075 TTC39AQ5SRH9 613 aa25.34■■□□□ 1.65
CLIP2-208ENST00000491075 TDHQ8IZJ6 230 aa25.34■■□□□ 1.65
CLIP2-208ENST00000491075 ZBTB21Q9ULJ3 1066 aa25.34■■□□□ 1.65
CLIP2-208ENST00000491075 MYH1P12882 1939 aa25.33■■□□□ 1.65
CLIP2-208ENST00000491075 IPO8O15397 1037 aaKnown RBP25.33■■□□□ 1.65
CLIP2-208ENST00000491075 IGSF3O75054 1194 aa25.33■■□□□ 1.65
CLIP2-208ENST00000491075 ERVK-9P63128 1117 aa25.33■■□□□ 1.65
CLIP2-208ENST00000491075 ERVK-24P63145 666 aa25.33■■□□□ 1.65
CLIP2-208ENST00000491075 DNAH12Q6ZR08 3092 aa25.33■■□□□ 1.65
CLIP2-208ENST00000491075 CCAR1Q8IX12 1150 aaKnown RBP25.33■■□□□ 1.65
CLIP2-208ENST00000491075 DEFB123Q8N688 67 aa25.33■■□□□ 1.65
CLIP2-208ENST00000491075 GPR108Q9NPR9 543 aa25.33■■□□□ 1.65
CLIP2-208ENST00000491075 SNRKQ9NRH2 765 aa25.33■■□□□ 1.65
CLIP2-208ENST00000491075 RBPJLQ9UBG7 517 aa25.33■■□□□ 1.65
CLIP2-208ENST00000491075 PEX10O60683 326 aa25.32■■□□□ 1.64
CLIP2-208ENST00000491075 GDF11O95390 407 aa25.32■■□□□ 1.64
CLIP2-208ENST00000491075 TRIM27P14373 513 aa25.32■■□□□ 1.64
CLIP2-208ENST00000491075 RGS2P41220 211 aa25.32■■□□□ 1.64
CLIP2-208ENST00000491075 CCDC158Q5M9N0 1113 aa25.32■■□□□ 1.64
CLIP2-208ENST00000491075 USP6NLQ92738 828 aa25.32■■□□□ 1.64
CLIP2-208ENST00000491075 PALD1Q9ULE6 856 aa25.32■■□□□ 1.64
CLIP2-208ENST00000491075 HLA-DOAP06340 250 aa25.31■■□□□ 1.64
CLIP2-208ENST00000491075 COL6A1P12109 1028 aa25.31■■□□□ 1.64
CLIP2-208ENST00000491075 CACNB2Q08289 660 aaPredicted RBP25.31■■□□□ 1.64
CLIP2-208ENST00000491075 SHROOM1Q2M3G4 852 aaPredicted RBP25.31■■□□□ 1.64
CLIP2-208ENST00000491075 ATF7IPQ6VMQ6 1270 aa25.31■■□□□ 1.64
CLIP2-208ENST00000491075 GPR142Q7Z601 462 aa25.31■■□□□ 1.64
CLIP2-208ENST00000491075 ADGRA1Q86SQ6 560 aa25.31■■□□□ 1.64
CLIP2-208ENST00000491075 APBA2Q99767 749 aa25.31■■□□□ 1.64
CLIP2-208ENST00000491075 UBE2OQ9C0C9 1292 aaKnown RBP25.31■■□□□ 1.64
CLIP2-208ENST00000491075 PORCNQ9H237 461 aa25.31■■□□□ 1.64
CLIP2-208ENST00000491075 TNNI3KQ59H18 835 aa25.3■■□□□ 1.64
CLIP2-208ENST00000491075 MORN1Q5T089 497 aa25.3■■□□□ 1.64
CLIP2-208ENST00000491075 PAGR1Q9BTK6 254 aa25.3■■□□□ 1.64
CLIP2-208ENST00000491075 FPGT-TNNI3KV9GXZ4 949 aa25.3■■□□□ 1.64
CLIP2-208ENST00000491075 CYP2E1P05181 493 aaPredicted RBP25.29■■□□□ 1.64
CLIP2-208ENST00000491075 USP17L2Q6R6M4 530 aa25.29■■□□□ 1.64
CLIP2-208ENST00000491075 PLEKHH3Q7Z736 793 aa25.29■■□□□ 1.64
CLIP2-208ENST00000491075 EMILIN3Q9NT22 766 aa25.29■■□□□ 1.64
CLIP2-208ENST00000491075 Q3C1V9 767 aa25.28■■□□□ 1.64
CLIP2-208ENST00000491075 ZNF512BQ96KM6 892 aaPredicted RBP25.28■■□□□ 1.64
CLIP2-208ENST00000491075 DBNDD2Q9BQY9 259 aa25.28■■□□□ 1.64
CLIP2-208ENST00000491075 CWC22Q9HCG8 908 aaKnown RBP25.28■■□□□ 1.64
CLIP2-208ENST00000491075 SAP30BPQ9UHR5 308 aaKnown RBP25.28■■□□□ 1.64
CLIP2-208ENST00000491075 STXBP5LQ9Y2K9 1186 aa25.28■■□□□ 1.64
CLIP2-208ENST00000491075 CCND3P30281 292 aaPredicted RBP25.27■■□□□ 1.64
CLIP2-208ENST00000491075 CCL14Q16627 93 aa25.27■■□□□ 1.64
CLIP2-208ENST00000491075 LHX8Q68G74 356 aa25.27■■□□□ 1.64
CLIP2-208ENST00000491075 Q7L0L9 218 aa25.27■■□□□ 1.64
CLIP2-208ENST00000491075 C12orf42Q96LP6 360 aa25.27■■□□□ 1.64
CLIP2-208ENST00000491075 CUL9Q8IWT3 2517 aa25.27■■□□□ 1.64
CLIP2-208ENST00000491075 LAMA2P24043 3122 aaKnown RBP25.26■■□□□ 1.63
CLIP2-208ENST00000491075 CCNA1P78396 465 aa25.26■■□□□ 1.63
CLIP2-208ENST00000491075 OS9Q13438 667 aaPredicted RBP25.26■■□□□ 1.63
CLIP2-208ENST00000491075 POLA2Q14181 598 aa25.26■■□□□ 1.63
CLIP2-208ENST00000491075 CERS3Q8IU89 383 aa25.26■■□□□ 1.63
CLIP2-208ENST00000491075 RABGAP1Q9Y3P9 1069 aa25.26■■□□□ 1.63
CLIP2-208ENST00000491075 GLRX3O76003 335 aaKnown RBP25.25■■□□□ 1.63
CLIP2-208ENST00000491075 GH2P01242 217 aa25.25■■□□□ 1.63
CLIP2-208ENST00000491075 MAP2K5Q13163 448 aa25.25■■□□□ 1.63
CLIP2-208ENST00000491075 LRRC26Q2I0M4 334 aa25.25■■□□□ 1.63
CLIP2-208ENST00000491075 POTEEQ6S8J3 1075 aa25.25■■□□□ 1.63
CLIP2-208ENST00000491075 FRAT1Q92837 279 aaPredicted RBP25.25■■□□□ 1.63
CLIP2-208ENST00000491075 FEZ1Q99689 392 aa25.25■■□□□ 1.63
CLIP2-208ENST00000491075 MTMR10Q9NXD2 777 aa25.25■■□□□ 1.63
CLIP2-208ENST00000491075 TNNQ9UQP3 1299 aa25.25■■□□□ 1.63
CLIP2-208ENST00000491075 USP17L15C9J2P7 530 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 USP17L13C9JLJ4 530 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 USP17L11C9JVI0 530 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 USP17L18D6R9N7 530 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 USP17L22D6RA61 530 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 USP17L17D6RBQ6 530 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms