RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 TM4SF4P48230 202 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 GABPAQ06546 454 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 SNAPC2Q13487 334 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 SHROOM1Q2M3G4 852 aaPredicted RBP15.34■□□□□ 0.05
LIMK1-207ENST00000491052 IFNL3Q8IZI9 196 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 DYNLL2Q96FJ2 89 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 NAPBQ9H115 298 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 SWAP70Q9UH65 585 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 TSKSQ9UJT2 592 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 ZBTB21Q9ULJ3 1066 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 CCDC171Q6TFL3 1326 aa15.34■□□□□ 0.05
LIMK1-207ENST00000491052 TRIM75PA6NK02 468 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 SMIM22K7EJ46 135 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 CA12O43570 354 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 TRPA1O75762 1119 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 GH2P01242 217 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 ASNSP08243 561 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 CETPP11597 493 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 INHBEP58166 350 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 CERKLQ49MI3 558 aaPredicted RBP15.33■□□□□ 0.04
LIMK1-207ENST00000491052 SBK1Q52WX2 424 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 TATDN1Q6P1N9 297 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 ZNF589Q86UQ0 364 aaPredicted RBP15.33■□□□□ 0.04
LIMK1-207ENST00000491052 STK11IPQ8N1F8 1099 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 MS4A4AQ96JQ5 239 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 RNF186Q9NXI6 227 aa15.33■□□□□ 0.04
LIMK1-207ENST00000491052 USP17L5A8MUK1 530 aa15.32■□□□□ 0.04
LIMK1-207ENST00000491052 IGF2BP3O00425 579 aaKnown RBP eCLIP15.32■□□□□ 0.04
LIMK1-207ENST00000491052 MPHOSPH10O00566 681 aaKnown RBP15.32■□□□□ 0.04
LIMK1-207ENST00000491052 CTCFP49711 727 aaPredicted RBP15.32■□□□□ 0.04
LIMK1-207ENST00000491052 MFAP1P55081 439 aaKnown RBP15.32■□□□□ 0.04
LIMK1-207ENST00000491052 JAG1P78504 1218 aa15.32■□□□□ 0.04
LIMK1-207ENST00000491052 ABCB5Q2M3G0 1257 aa15.32■□□□□ 0.04
LIMK1-207ENST00000491052 VPS53Q5VIR6 699 aa15.32■□□□□ 0.04
LIMK1-207ENST00000491052 IFNL1Q8IU54 200 aa15.32■□□□□ 0.04
LIMK1-207ENST00000491052 BRI3BPQ8WY22 251 aa15.32■□□□□ 0.04
LIMK1-207ENST00000491052 GINM1Q9NU53 330 aa15.32■□□□□ 0.04
LIMK1-207ENST00000491052 KCNH4Q9UQ05 1017 aa15.32■□□□□ 0.04
LIMK1-207ENST00000491052 ROBO3Q96MS0 1386 aa15.32■□□□□ 0.04
LIMK1-207ENST00000491052 CXCL11O14625 94 aa15.31■□□□□ 0.04
LIMK1-207ENST00000491052 CDK8P49336 464 aa15.31■□□□□ 0.04
LIMK1-207ENST00000491052 OTUD7BQ6GQQ9 843 aa15.31■□□□□ 0.04
LIMK1-207ENST00000491052 C16orf86Q6ZW13 317 aa15.31■□□□□ 0.04
LIMK1-207ENST00000491052 AS3MTQ9HBK9 375 aa15.31■□□□□ 0.04
LIMK1-207ENST00000491052 CABP5Q9NP86 173 aa15.31■□□□□ 0.04
LIMK1-207ENST00000491052 SAGE1Q9NXZ1 904 aa15.31■□□□□ 0.04
LIMK1-207ENST00000491052 TAOK2Q9UL54 1235 aa15.31■□□□□ 0.04
LIMK1-207ENST00000491052 AFG3L2Q9Y4W6 797 aa15.31■□□□□ 0.04
LIMK1-207ENST00000491052 TESPA1A2RU30 521 aaPredicted RBP15.3■□□□□ 0.04
LIMK1-207ENST00000491052 FOXP2O15409 715 aa15.3■□□□□ 0.04
LIMK1-207ENST00000491052 MGAMO43451 1857 aa15.3■□□□□ 0.04
LIMK1-207ENST00000491052 ALDH1A1P00352 501 aa15.3■□□□□ 0.04
LIMK1-207ENST00000491052 HSPA8P11142 646 aaKnown RBP15.3■□□□□ 0.04
LIMK1-207ENST00000491052 SPP2Q13103 211 aa15.3■□□□□ 0.04
LIMK1-207ENST00000491052 RAB3GAP1Q15042 981 aa15.3■□□□□ 0.04
LIMK1-207ENST00000491052 GADL1Q6ZQY3 521 aa15.3■□□□□ 0.04
LIMK1-207ENST00000491052 ZNF280CQ8ND82 737 aa15.3■□□□□ 0.04
LIMK1-207ENST00000491052 PTPN18Q99952 460 aa15.3■□□□□ 0.04
LIMK1-207ENST00000491052 TBC1D2Q9BYX2 928 aa15.3■□□□□ 0.04
LIMK1-207ENST00000491052 TBC1D8O95759 1140 aa15.29■□□□□ 0.04
LIMK1-207ENST00000491052 SLC3A2P08195 630 aaKnown RBP15.29■□□□□ 0.04
LIMK1-207ENST00000491052 HSPD1P10809 573 aaKnown RBP15.29■□□□□ 0.04
LIMK1-207ENST00000491052 CHMLP26374 656 aa15.29■□□□□ 0.04
LIMK1-207ENST00000491052 LBX1P52954 281 aa15.29■□□□□ 0.04
LIMK1-207ENST00000491052 PPARAQ07869 468 aa15.29■□□□□ 0.04
LIMK1-207ENST00000491052 FAM43AQ8N2R8 423 aa15.29■□□□□ 0.04
LIMK1-207ENST00000491052 RUFY2Q8WXA3 655 aa15.29■□□□□ 0.04
LIMK1-207ENST00000491052 MKNK2Q9HBH9 465 aa15.29■□□□□ 0.04
LIMK1-207ENST00000491052 PARP14Q460N5 1801 aa15.29■□□□□ 0.04
LIMK1-207ENST00000491052 RAD50Q92878 1312 aa15.28■□□□□ 0.04
LIMK1-207ENST00000491052 A0A0G2JLL6 359 aaPredicted RBP15.28■□□□□ 0.04
LIMK1-207ENST00000491052 BTBD19C9JJ37 291 aa15.28■□□□□ 0.04
LIMK1-207ENST00000491052 AKR1B1P15121 316 aa15.28■□□□□ 0.04
LIMK1-207ENST00000491052 MTMR2Q13614 643 aa15.28■□□□□ 0.04
LIMK1-207ENST00000491052 SEPT2Q15019 361 aa15.28■□□□□ 0.04
LIMK1-207ENST00000491052 ALX1Q15699 326 aa15.28■□□□□ 0.04
LIMK1-207ENST00000491052 BMP2KLQ5H9B9 411 aa15.28■□□□□ 0.04
LIMK1-207ENST00000491052 PRRT2Q7Z6L0 340 aaPredicted RBP15.28■□□□□ 0.04
LIMK1-207ENST00000491052 FEZ1Q99689 392 aa15.28■□□□□ 0.04
LIMK1-207ENST00000491052 WDR18Q9BV38 432 aa15.28■□□□□ 0.04
LIMK1-207ENST00000491052 ZSWIM8A7E2V4 1837 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 ZMYM6O95789 1325 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 PRDM1O75626 825 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 FGAP02671 866 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 HMGCS2P54868 508 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 CTDSPL2Q05D32 466 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 TAF1CQ15572 869 aaPredicted RBP15.27■□□□□ 0.04
LIMK1-207ENST00000491052 TMEM179Q6ZVK1 233 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 FASTKD5Q7L8L6 764 aaKnown RBP15.27■□□□□ 0.04
LIMK1-207ENST00000491052 CCDC17Q96LX7 622 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 IL25Q9H293 177 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 ZNF287Q9HBT7 754 aa15.27■□□□□ 0.04
LIMK1-207ENST00000491052 RASA1P20936 1047 aa15.26■□□□□ 0.03
LIMK1-207ENST00000491052 PDE4BQ07343 736 aa15.26■□□□□ 0.03
LIMK1-207ENST00000491052 CRHR2Q13324 411 aa15.26■□□□□ 0.03
LIMK1-207ENST00000491052 MOGSQ13724 837 aa15.26■□□□□ 0.03
LIMK1-207ENST00000491052 ZYXQ15942 572 aaKnown RBP15.26■□□□□ 0.03
LIMK1-207ENST00000491052 ANKRD23Q86SG2 305 aa15.26■□□□□ 0.03
LIMK1-207ENST00000491052 CLEC10AQ8IUN9 316 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms