RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CACNB3P54284 484 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 KRT25Q7Z3Z0 450 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 UIMC1Q96RL1 719 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 TMEM232C9JQI7 657 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 JAK2O60674 1132 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 PCP11498 1178 aaKnown RBP16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 USP37Q86T82 979 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 IQSEC2Q5JU85 1478 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 N4BP3O15049 544 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 GDF11O95390 407 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 MCAMP43121 646 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 FAM114A1Q8IWE2 563 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 SLC16A10Q8TF71 515 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 PUS7LQ9H0K6 701 aaKnown RBP16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 PIH1D3Q9NQM4 214 aaKnown RBP16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 CCNT1O60563 726 aaKnown RBP16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 GRIPAP1Q4V328 841 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 PHACTR2O75167 634 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 SPA17Q15506 151 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 KLHL40Q2TBA0 621 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 ANKRD35Q8N283 1001 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 MAP4K1Q92918 833 aa16.3■□□□□ 0.2
ARHGEF39-205ENST00000490638 SMCO2A6NFE2 343 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 HSP90AA4PQ58FG1 418 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 ARMC9Q7Z3E5 817 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 KANSL2Q9H9L4 492 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 ECE2O60344 883 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 SP8Q8IXZ3 490 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 NUP88Q99567 741 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 TDRD3Q9H7E2 651 aaKnown RBP16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 SWAP70Q9UH65 585 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 CCT6AP40227 531 aaKnown RBP16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 USP25Q9UHP3 1055 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 TMEM131LA2VDJ0 1609 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 ADGRB1O14514 1584 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 CYP21A2P08686 494 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 KRT13P13646 458 aa16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 PUF60Q9UHX1 559 aaKnown RBP16.29■□□□□ 0.2
ARHGEF39-205ENST00000490638 TTC38Q5R3I4 469 aa16.28■□□□□ 0.2
ARHGEF39-205ENST00000490638 ADCY9O60503 1353 aa16.28■□□□□ 0.2
ARHGEF39-205ENST00000490638 CAVIN2O95810 425 aa16.28■□□□□ 0.2
ARHGEF39-205ENST00000490638 ZNF34Q8IZ26 560 aa16.28■□□□□ 0.2
ARHGEF39-205ENST00000490638 SLC5A4Q9NY91 659 aa16.28■□□□□ 0.2
ARHGEF39-205ENST00000490638 ABT1Q9ULW3 272 aaKnown RBP16.28■□□□□ 0.2
ARHGEF39-205ENST00000490638 NRKQ7Z2Y5 1582 aa16.28■□□□□ 0.2
ARHGEF39-205ENST00000490638 FBXO11Q86XK2 927 aa16.28■□□□□ 0.2
ARHGEF39-205ENST00000490638 ZNF274Q96GC6 653 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF39-205ENST00000490638 CYP2D7A0A087X1C5 515 aa16.27■□□□□ 0.2
ARHGEF39-205ENST00000490638 KIF22Q14807 665 aa16.27■□□□□ 0.2
ARHGEF39-205ENST00000490638 ANO1Q5XXA6 986 aa16.27■□□□□ 0.2
ARHGEF39-205ENST00000490638 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.27■□□□□ 0.2
ARHGEF39-205ENST00000490638 RUFY1Q96T51 708 aa16.27■□□□□ 0.2
ARHGEF39-205ENST00000490638 CRKP46108 304 aa16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 ATL3Q6DD88 541 aa16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 NCAPG2Q86XI2 1143 aa16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 FOXP4Q8IVH2 680 aaPredicted RBP16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 FAM212AQ96EL1 285 aa16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 MYO3BQ8WXR4 1341 aa16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 A0A1B0GVL5 298 aa16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 GPSM2P81274 684 aa16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 HAUS3Q68CZ6 603 aa16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 SPAG5Q96R06 1193 aa16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 MRPL11Q9Y3B7 192 aaKnown RBP16.27■□□□□ 0.19
ARHGEF39-205ENST00000490638 AZI2Q9H6S1 392 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 PSTPIP2Q9H939 334 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 CA8P35219 290 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 ME3Q16798 604 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 RASEFQ8IZ41 740 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 DYNLL2Q96FJ2 89 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 CRAMP1Q96RY5 1269 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 LRWD1Q9UFC0 647 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 PCDHA1Q9Y5I3 950 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 DKC1O60832 514 aaKnown RBP eCLIP16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 CETN2P41208 172 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 IREB2P48200 963 aaKnown RBP16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 PLCD1P51178 756 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 SF3B3Q15393 1217 aaKnown RBP16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 GPATCH4Q5T3I0 446 aaKnown RBP16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 NLRX1Q86UT6 975 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 SLC10A4Q96EP9 437 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 DRC1Q96MC2 740 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
ARHGEF39-205ENST00000490638 M0R2C6 588 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 NCAPH2Q6IBW4 605 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 SPC25Q9HBM1 224 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 TESPA1A2RU30 521 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 TTLL1O95922 423 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 SV2BQ7L1I2 683 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 ARGLU1Q9NWB6 273 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 MYO6Q9UM54 1294 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 NEBLO76041 1014 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 YEATS4O95619 227 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 HSP90AA2PQ14568 343 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 FBXO41Q8TF61 875 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 CYP2E1P05181 493 aaPredicted RBP16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 MKRN3Q13064 507 aaKnown RBP16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 TAF4BQ92750 862 aa16.25■□□□□ 0.19
ARHGEF39-205ENST00000490638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms