RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 PIF1Q9H611 641 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 BRMS1Q9HCU9 246 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 STRIP2Q9ULQ0 834 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 R3HCC1Q9Y3T6 440 aaKnown RBP7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 ROBO2Q9HCK4 1378 aa7.15□□□□□ -1.26
SSX2IP-208ENST00000490476 RALGAPBQ86X10 1494 aa7.15□□□□□ -1.27
SSX2IP-208ENST00000490476 ARHGAP23Q9P227 1491 aa7.15□□□□□ -1.27
SSX2IP-208ENST00000490476 KIAA1210Q9ULL0 1709 aa7.15□□□□□ -1.27
SSX2IP-208ENST00000490476 ABCC3O15438 1527 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 CILPO75339 1184 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 ATRNO75882 1429 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 ADAMTS2O95450 1211 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 ECEL1O95672 775 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 AMPD1P23109 780 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 BAG6P46379 1132 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 SRSF11Q05519 484 aaKnown RBP7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 MPP2Q14168 576 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 CARMIL1Q5VZK9 1371 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 C20orf204Q6ZNR8 217 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 CACTIN-AS1Q8N1I8 211 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 HNRNPLLQ8WVV9 542 aaKnown RBP7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 EDARADDQ8WWZ3 215 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 GAL3ST3Q96A11 431 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 CRBNQ96SW2 442 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 CORO1BQ9BR76 489 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 TRIM55Q9BYV6 548 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 MLH3Q9UHC1 1453 aa7.14□□□□□ -1.27
SSX2IP-208ENST00000490476 FSCN2O14926 492 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 GRIN3BO60391 1043 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 CYP11A1P05108 521 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 MAOBP27338 520 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 ZNF165P49910 485 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 EIF6P56537 245 aaKnown RBP7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 KRT76Q01546 638 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 ZNF252P-AS1Q0IIN9 211 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 POU4F3Q15319 338 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 CHSY3Q70JA7 882 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 REC114Q7Z4M0 266 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 PDZD3Q86UT5 571 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 USP26Q9BXU7 913 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 TRPC5Q9UL62 973 aaPredicted RBP7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 PCDHA4Q9UN74 947 aa7.13□□□□□ -1.27
SSX2IP-208ENST00000490476 PDE4DIPQ5VU43 2346 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 MSH6P52701 1360 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 PCNTO95613 3336 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 SMAD7O15105 426 aaKnown RBP7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 CDK8P49336 464 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 NLRP12P59046 1061 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 CLCQ05315 142 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 PDE3AQ14432 1141 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 KANK3Q6NY19 840 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 NOP9Q86U38 636 aaKnown RBP7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 DMRTC2Q8IXT2 367 aaPredicted RBP7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 GPBAR1Q8TDU6 330 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 KLHDC7BQ96G42 594 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 LRRC3Q9BY71 257 aa7.12□□□□□ -1.27
SSX2IP-208ENST00000490476 TNRQ92752 1358 aa7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 CCDC85CA6NKD9 419 aa7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 U2SURPO15042 1029 aaKnown RBP7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 TRIM37O94972 964 aa7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 RPL6Q02878 288 aaKnown RBP7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 MSL1Q68DK7 614 aa7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 THEMISQ8N1K5 641 aaPredicted RBP7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 SHDQ96IW2 340 aa7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 BTBD6Q96KE9 485 aa7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 CCDC86Q9H6F5 360 aaKnown RBP7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 SOX17Q9H6I2 414 aaPredicted RBP7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 PRKAG3Q9UGI9 489 aa7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 PCDHB14Q9Y5E9 798 aa7.11□□□□□ -1.27
SSX2IP-208ENST00000490476 KIF27Q86VH2 1401 aa7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 TNS1Q9HBL0 1735 aaKnown RBP7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 SHISA8B8ZZ34 492 aa7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 K7ELQ4 463 aaPredicted RBP7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 LIG1P18858 919 aa7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 KCNMA1Q12791 1236 aa7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 WIPI1Q5MNZ9 446 aaPredicted RBP7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 OSGEPQ9NPF4 335 aa7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 TMA7Q9Y2S6 64 aaKnown RBP7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 POLR3KQ9Y2Y1 108 aaPredicted RBP7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 NRKQ7Z2Y5 1582 aa7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 PRDM15P57071 1507 aaPredicted RBP7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 NLRP1Q9C000 1473 aa7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 WDR90Q96KV7 1748 aa7.1□□□□□ -1.27
SSX2IP-208ENST00000490476 MYOM1P52179 1685 aa7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 AATKQ6ZMQ8 1374 aa7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 DDX3YO15523 660 aaKnown RBP7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 OIP5O43482 229 aa7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 CTSBP07858 339 aa7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 SLURP2P0DP57 97 aa7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 FAM169BQ8N8A8 192 aa7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 WNT8BQ93098 351 aa7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 MRFAP1L1Q96HT8 127 aa7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 SRPK1Q96SB4 655 aaKnown RBP7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 USP21Q9UK80 565 aa7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 CDK11AQ9UQ88 783 aaPredicted RBP7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 MARF1Q9Y4F3 1742 aaKnown RBP7.09□□□□□ -1.27
SSX2IP-208ENST00000490476 BCRP11274 1271 aa7.08□□□□□ -1.28
SSX2IP-208ENST00000490476 INPP5AQ14642 412 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms