RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 HMGCRP04035 888 aa21.7■■□□□ 1.06
YIPF3-208ENST00000490447 METTL16Q86W50 562 aaKnown RBP21.7■■□□□ 1.06
YIPF3-208ENST00000490447 DNAJC18Q9H819 358 aa21.7■■□□□ 1.06
YIPF3-208ENST00000490447 PAK6Q9NQU5 681 aaPredicted RBP21.7■■□□□ 1.06
YIPF3-208ENST00000490447 USP5P45974 858 aa21.69■■□□□ 1.06
YIPF3-208ENST00000490447 DYNLL1P63167 89 aaKnown RBP21.69■■□□□ 1.06
YIPF3-208ENST00000490447 EAF2Q96CJ1 260 aaPredicted RBP21.69■■□□□ 1.06
YIPF3-208ENST00000490447 ZBTB21Q9ULJ3 1066 aa21.69■■□□□ 1.06
YIPF3-208ENST00000490447 CEP290O15078 2479 aa21.68■■□□□ 1.06
YIPF3-208ENST00000490447 RLBP1P12271 317 aa21.68■■□□□ 1.06
YIPF3-208ENST00000490447 ERC1Q8IUD2 1116 aa21.68■■□□□ 1.06
YIPF3-208ENST00000490447 MIGA1Q8NAN2 632 aa21.68■■□□□ 1.06
YIPF3-208ENST00000490447 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.68■■□□□ 1.06
YIPF3-208ENST00000490447 MORF4L1Q9UBU8 362 aa21.68■■□□□ 1.06
YIPF3-208ENST00000490447 EVI5O60447 810 aa21.67■■□□□ 1.06
YIPF3-208ENST00000490447 HOXA7P31268 230 aaPredicted RBP21.67■■□□□ 1.06
YIPF3-208ENST00000490447 MAP3K12Q12852 859 aa21.67■■□□□ 1.06
YIPF3-208ENST00000490447 CEP85Q6P2H3 762 aa21.67■■□□□ 1.06
YIPF3-208ENST00000490447 CCAR1Q8IX12 1150 aaKnown RBP21.67■■□□□ 1.06
YIPF3-208ENST00000490447 MAGEB6Q8N7X4 407 aa21.67■■□□□ 1.06
YIPF3-208ENST00000490447 SIPA1L1O43166 1804 aa21.67■■□□□ 1.06
YIPF3-208ENST00000490447 RANBP2P49792 3224 aaKnown RBP21.67■■□□□ 1.06
YIPF3-208ENST00000490447 HERVK_113P62684 666 aa21.66■■□□□ 1.06
YIPF3-208ENST00000490447 GPRC5AQ8NFJ5 357 aa21.66■■□□□ 1.06
YIPF3-208ENST00000490447 P2RX7Q99572 595 aaKnown RBP21.66■■□□□ 1.06
YIPF3-208ENST00000490447 RBM27Q9P2N5 1060 aaKnown RBP21.66■■□□□ 1.06
YIPF3-208ENST00000490447 JAG1P78504 1218 aa21.65■■□□□ 1.06
YIPF3-208ENST00000490447 PDE3AQ14432 1141 aa21.65■■□□□ 1.06
YIPF3-208ENST00000490447 TMED8Q6PL24 325 aaPredicted RBP21.65■■□□□ 1.06
YIPF3-208ENST00000490447 AACSQ86V21 672 aa21.65■■□□□ 1.06
YIPF3-208ENST00000490447 GTF3C2Q8WUA4 911 aaPredicted RBP21.65■■□□□ 1.06
YIPF3-208ENST00000490447 SOCS4Q8WXH5 440 aa21.65■■□□□ 1.06
YIPF3-208ENST00000490447 HMX1Q9NP08 348 aaPredicted RBP21.65■■□□□ 1.06
YIPF3-208ENST00000490447 GJD2Q9UKL4 321 aa21.65■■□□□ 1.06
YIPF3-208ENST00000490447 EXOC6BQ9Y2D4 811 aa21.65■■□□□ 1.06
YIPF3-208ENST00000490447 RPTORQ8N122 1335 aa21.65■■□□□ 1.06
YIPF3-208ENST00000490447 FOCADQ5VW36 1801 aa21.65■■□□□ 1.06
YIPF3-208ENST00000490447 SHROOM1Q2M3G4 852 aaPredicted RBP21.64■■□□□ 1.05
YIPF3-208ENST00000490447 HSP90AB4PQ58FF6 505 aa21.64■■□□□ 1.05
YIPF3-208ENST00000490447 NECAB2Q7Z6G3 386 aa21.64■■□□□ 1.05
YIPF3-208ENST00000490447 PAWRQ96IZ0 340 aaKnown RBP21.64■■□□□ 1.05
YIPF3-208ENST00000490447 FEZ1Q99689 392 aa21.64■■□□□ 1.05
YIPF3-208ENST00000490447 NUDT12Q9BQG2 462 aa21.64■■□□□ 1.05
YIPF3-208ENST00000490447 CRISPLD2Q9H0B8 497 aa21.64■■□□□ 1.05
YIPF3-208ENST00000490447 NDUFB9Q9Y6M9 179 aa21.64■■□□□ 1.05
YIPF3-208ENST00000490447 GH2P01242 217 aa21.63■■□□□ 1.05
YIPF3-208ENST00000490447 CYP2B6P20813 491 aa21.63■■□□□ 1.05
YIPF3-208ENST00000490447 MAPK4P31152 587 aa21.63■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L2Q6R6M4 530 aa21.63■■□□□ 1.05
YIPF3-208ENST00000490447 ANKLE1Q8NAG6 615 aa21.63■■□□□ 1.05
YIPF3-208ENST00000490447 PAGR1Q9BTK6 254 aa21.63■■□□□ 1.05
YIPF3-208ENST00000490447 CWC22Q9HCG8 908 aaKnown RBP21.63■■□□□ 1.05
YIPF3-208ENST00000490447 SERPINB13Q9UIV8 391 aa21.63■■□□□ 1.05
YIPF3-208ENST00000490447 SZT2Q5T011 3432 aa21.63■■□□□ 1.05
YIPF3-208ENST00000490447 TTC6Q86TZ1 520 aa21.62■■□□□ 1.05
YIPF3-208ENST00000490447 EHD4Q9H223 541 aa21.62■■□□□ 1.05
YIPF3-208ENST00000490447 ANTXR1Q9H6X2 564 aa21.62■■□□□ 1.05
YIPF3-208ENST00000490447 CDK5RAP2Q96SN8 1893 aa21.62■■□□□ 1.05
YIPF3-208ENST00000490447 ERVK-9P63128 1117 aa21.61■■□□□ 1.05
YIPF3-208ENST00000490447 ERVK-24P63145 666 aa21.61■■□□□ 1.05
YIPF3-208ENST00000490447 RAB3GAP1Q15042 981 aa21.61■■□□□ 1.05
YIPF3-208ENST00000490447 TTF1Q15361 905 aaPredicted RBP21.61■■□□□ 1.05
YIPF3-208ENST00000490447 ZYXQ15942 572 aaKnown RBP21.61■■□□□ 1.05
YIPF3-208ENST00000490447 TATDN1Q6P1N9 297 aa21.61■■□□□ 1.05
YIPF3-208ENST00000490447 MIER1Q8N108 512 aa21.61■■□□□ 1.05
YIPF3-208ENST00000490447 TRIB2Q92519 343 aa21.61■■□□□ 1.05
YIPF3-208ENST00000490447 TXNRD2Q9NNW7 524 aa21.61■■□□□ 1.05
YIPF3-208ENST00000490447 EMILIN3Q9NT22 766 aa21.61■■□□□ 1.05
YIPF3-208ENST00000490447 TRIOBPQ9H2D6 2365 aa21.6■■□□□ 1.05
YIPF3-208ENST00000490447 MS4A1P11836 297 aa21.6■■□□□ 1.05
YIPF3-208ENST00000490447 USP14P54578 494 aa21.6■■□□□ 1.05
YIPF3-208ENST00000490447 TRIM32Q13049 653 aa21.6■■□□□ 1.05
YIPF3-208ENST00000490447 CERKLQ49MI3 558 aaPredicted RBP21.6■■□□□ 1.05
YIPF3-208ENST00000490447 TRMT44Q8IYL2 757 aaKnown RBP21.6■■□□□ 1.05
YIPF3-208ENST00000490447 PANK1Q8TE04 598 aa21.6■■□□□ 1.05
YIPF3-208ENST00000490447 CABP5Q9NP86 173 aa21.6■■□□□ 1.05
YIPF3-208ENST00000490447 MYO5AQ9Y4I1 1855 aaKnown RBP21.6■■□□□ 1.05
YIPF3-208ENST00000490447 PEX10O60683 326 aa21.59■■□□□ 1.05
YIPF3-208ENST00000490447 ZKSCAN1P17029 563 aaPredicted RBP21.59■■□□□ 1.05
YIPF3-208ENST00000490447 ABCB5Q2M3G0 1257 aa21.59■■□□□ 1.05
YIPF3-208ENST00000490447 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
YIPF3-208ENST00000490447 DIS3LQ8TF46 1054 aaKnown RBP21.59■■□□□ 1.05
YIPF3-208ENST00000490447 IL1RAPL2Q9NP60 686 aa21.59■■□□□ 1.05
YIPF3-208ENST00000490447 RBPJLQ9UBG7 517 aa21.59■■□□□ 1.05
YIPF3-208ENST00000490447 DOCK3Q8IZD9 2030 aa21.59■■□□□ 1.05
YIPF3-208ENST00000490447 MAGEB6P1A0A0J9YX57 407 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L15C9J2P7 530 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L13C9JLJ4 530 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L11C9JVI0 530 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L18D6R9N7 530 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L22D6RA61 530 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L17D6RBQ6 530 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L19D6RCP7 530 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L20D6RJB6 530 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 POLR3DP05423 398 aaPredicted RBP21.58■■□□□ 1.05
YIPF3-208ENST00000490447 XRCC5P13010 732 aaKnown RBP21.58■■□□□ 1.05
YIPF3-208ENST00000490447 PRKAR2AP13861 404 aaKnown RBP21.58■■□□□ 1.05
YIPF3-208ENST00000490447 USP17L24Q0WX57 530 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 GPR142Q7Z601 462 aa21.58■■□□□ 1.05
YIPF3-208ENST00000490447 CLASRPQ8N2M8 674 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms