RNA–Protein interactions for RNA: ENST00000490393.1

RIPPLY3-203, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 1,885 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-203ENST00000490393 YEATS4O95619 227 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 POLR3DP05423 398 aaPredicted RBP15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 NASPP49321 788 aaPredicted RBP15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 PLCD1P51178 756 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 TFAP4Q01664 338 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 DOK7Q18PE1 504 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 FAM47AQ5JRC9 791 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 RCSD1Q6JBY9 416 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 MAPKAPK5Q8IW41 473 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 AIFM3Q96NN9 605 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 RBSNQ9H1K0 784 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 MKNK2Q9HBH9 465 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 GJB4Q9NTQ9 266 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 FOCADQ5VW36 1801 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 SNED1Q8TER0 1413 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 FLT1P17948 1338 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 G3V3G9 751 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 LIG1P18858 919 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 DCAF8Q5TAQ9 597 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 STRIP1Q5VSL9 837 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 C16orf86Q6ZW13 317 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 ZNF444Q8N0Y2 327 aaPredicted RBP15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 LINC00301Q8NCQ3 95 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 TSPY26PQ9H489 355 aa15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 DDX19AQ9NUU7 478 aaKnown RBP15.78■□□□□ 0.12
RIPPLY3-203ENST00000490393 DDX60LQ5H9U9 1706 aaKnown RBP15.77■□□□□ 0.12
RIPPLY3-203ENST00000490393 KIF28PB7ZC32 967 aa15.77■□□□□ 0.11
RIPPLY3-203ENST00000490393 CHRNA5P30532 468 aa15.77■□□□□ 0.11
RIPPLY3-203ENST00000490393 SUPT20HQ8NEM7 779 aa15.77■□□□□ 0.11
RIPPLY3-203ENST00000490393 DYNLL2Q96FJ2 89 aa15.77■□□□□ 0.11
RIPPLY3-203ENST00000490393 IL17RBQ9NRM6 502 aa15.77■□□□□ 0.11
RIPPLY3-203ENST00000490393 TTF2Q9UNY4 1162 aaKnown RBP15.77■□□□□ 0.11
RIPPLY3-203ENST00000490393 ECM29Q5VYK3 1845 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 GUCY1A2P33402 732 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 HDLBPQ00341 1268 aaKnown RBP15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 KCNG4Q8TDN1 519 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 PANK2Q9BZ23 570 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 NMT2O60551 498 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 MMP1P03956 469 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 RASA1P20936 1047 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 CDK8P49336 464 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 ADALQ6DHV7 355 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 TMTC3Q6ZXV5 915 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 FUCA2Q9BTY2 467 aa15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 FOXP1Q9H334 677 aaPredicted RBP15.76■□□□□ 0.11
RIPPLY3-203ENST00000490393 MYH1P12882 1939 aa15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 C10orf71Q711Q0 1435 aa15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 A0A1W2PQ27 194 aa15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 A0A1W2PQ64 194 aa15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 A0A1W2PQD8 194 aa15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 NOVP48745 357 aa15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 AKAP17AQ02040 695 aaKnown RBP15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 CEBPZQ03701 1054 aaKnown RBP15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 SAFBQ15424 915 aaKnown RBP eCLIP15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 ANO1Q5XXA6 986 aa15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 RBM43Q6ZSC3 357 aaKnown RBP15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 DEFB132Q7Z7B7 95 aa15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 CTCFLQ8NI51 663 aaPredicted RBP15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 FTOQ9C0B1 505 aaKnown RBP eCLIP15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 DACT1Q9NYF0 836 aa15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 SAP30BPQ9UHR5 308 aaKnown RBP15.75■□□□□ 0.11
RIPPLY3-203ENST00000490393 TSPY3P0CV98 308 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 TSPY8P0CW00 308 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 KIAA2012Q0VF49 1180 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 PKN1Q16512 942 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 NEDD1Q8NHV4 660 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 TEKT1Q969V4 418 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 NUP62CLQ9H1M0 184 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 KAT14Q9H8E8 782 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 CLIC4Q9Y696 253 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 UBE2Q2LH0YL09 131 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 WDHD1O75717 1129 aaPredicted RBP15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 XBP1P17861 261 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 KIF5BP33176 963 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 SLC39A14Q15043 492 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 DACT2Q5SW24 774 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 APOBEC3HQ6NTF7 200 aaKnown RBP15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 CCDC125Q86Z20 511 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 BICD2Q8TD16 824 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 FBXW7Q969H0 707 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 ZDHHC15Q96MV8 337 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 CLSTN2Q9H4D0 955 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 DBNDD1Q9H9R9 158 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 PCDHA7Q9UN72 937 aa15.74■□□□□ 0.11
RIPPLY3-203ENST00000490393 MYH6P13533 1939 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 USP17L3A6NCW0 530 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 USP17L4A6NCW7 530 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 SPTLC2O15270 562 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 ECE2O60344 883 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 NR1I2O75469 434 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 GABPAQ06546 454 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 STK38Q15208 465 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 UVSSAQ2YD98 709 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 USP17L1Q7RTZ2 530 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 CCAR1Q8IX12 1150 aaKnown RBP15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 CMTR1Q8N1G2 835 aaKnown RBP15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 CCDC82Q8N4S0 544 aa15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 SRBD1Q8N5C6 995 aaKnown RBP15.73■□□□□ 0.11
RIPPLY3-203ENST00000490393 ENGASEQ8NFI3 743 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms