RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 DYNLL2Q96FJ2 89 aa14.8□□□□□ -0.04
HDAC1-210ENST00000490081 THSD7BQ9C0I4 1608 aa14.8□□□□□ -0.04
HDAC1-210ENST00000490081 GREB1LQ9C091 1923 aaPredicted RBP14.8□□□□□ -0.04
HDAC1-210ENST00000490081 SMIM22K7EJ46 135 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 SLC27A2O14975 620 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 ASNSP08243 561 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 CTDSPL2Q05D32 466 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 DOCK1Q14185 1865 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 CREB3L3Q68CJ9 461 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 SCYL3Q8IZE3 742 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 ZNF444Q8N0Y2 327 aaPredicted RBP14.79□□□□□ -0.04
HDAC1-210ENST00000490081 ATAD5Q96QE3 1844 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 WRNIP1Q96S55 665 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 MTA3Q9BTC8 594 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 MKNK2Q9HBH9 465 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 OTOFQ9HC10 1997 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 TCP11L1Q9NUJ3 509 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 WBP1LQ9NX94 342 aa14.79□□□□□ -0.04
HDAC1-210ENST00000490081 PLIN4Q96Q06 1357 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 WDR33Q9C0J8 1336 aaKnown RBP14.78□□□□□ -0.04
HDAC1-210ENST00000490081 UBE2Q2LH0YL09 131 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 ZKSCAN1P17029 563 aaPredicted RBP14.78□□□□□ -0.04
HDAC1-210ENST00000490081 TTLL12Q14166 644 aaPredicted RBP14.78□□□□□ -0.04
HDAC1-210ENST00000490081 KRT32Q14532 448 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 RRP1BQ14684 758 aaKnown RBP14.78□□□□□ -0.04
HDAC1-210ENST00000490081 PPP4R3BQ5MIZ7 849 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 NEDD1Q8NHV4 660 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 BACH2Q9BYV9 841 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 KRT23Q9C075 422 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 ZNF408Q9H9D4 720 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 CSADQ9Y600 493 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 TACC3Q9Y6A5 838 aa14.78□□□□□ -0.04
HDAC1-210ENST00000490081 IGKV6D-41A0A0C4DH26 115 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 SEC24BO95487 1268 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 SLURP2P0DP57 97 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 INPP5BP32019 993 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 NOVP48745 357 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 HUNKP57058 714 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 ANAPC15P60006 121 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 HAND2P61296 217 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 PPATQ06203 517 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 VGLL4Q14135 290 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 ABCB5Q2M3G0 1257 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 TMEM179Q6ZVK1 233 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 ERO1BQ86YB8 467 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 TBC1D10CQ8IV04 446 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 SLC44A5Q8NCS7 719 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 SLC10A4Q96EP9 437 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 WDR18Q9BV38 432 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 CABP5Q9NP86 173 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 SYNPO2Q9UMS6 1093 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 SNCAIPQ9Y6H5 919 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 PHIPQ8WWQ0 1821 aa14.77□□□□□ -0.05
HDAC1-210ENST00000490081 SPDYE5A6NIY4 337 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 FAM196BA6NMK8 535 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 E7EWF7 191 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 PTPRAP18433 802 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 MCCP23508 829 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 PRKG1Q13976 671 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 SLC4A8Q2Y0W8 1093 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 CCDC178Q5BJE1 867 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 MOB2Q70IA6 237 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 IL27Q8NEV9 243 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 NCOA7Q8NI08 942 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 ESR2Q92731 530 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 ZKSCAN4Q969J2 545 aaPredicted RBP14.76□□□□□ -0.05
HDAC1-210ENST00000490081 CCDC102AQ96A19 550 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 KANSL2Q9H9L4 492 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 PRDM10Q9NQV6 1147 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 PICK1Q9NRD5 415 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 ZBTB21Q9ULJ3 1066 aa14.76□□□□□ -0.05
HDAC1-210ENST00000490081 USP17L5A8MUK1 530 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 HMGB1P09429 215 aaKnown RBP14.75□□□□□ -0.05
HDAC1-210ENST00000490081 ZBTB48P10074 688 aaPredicted RBP14.75□□□□□ -0.05
HDAC1-210ENST00000490081 GUCY1A2P33402 732 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 JAG1P78504 1218 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 TRDNQ13061 729 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 RGMBQ6NW40 437 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 ANKS1AQ92625 1134 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 MKL1Q969V6 931 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 TTC14Q96N46 770 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.75□□□□□ -0.05
HDAC1-210ENST00000490081 TM6SF1Q9BZW5 370 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 ABT1Q9ULW3 272 aaKnown RBP14.75□□□□□ -0.05
HDAC1-210ENST00000490081 FZD1Q9UP38 647 aa14.75□□□□□ -0.05
HDAC1-210ENST00000490081 WDR19Q8NEZ3 1342 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 CXCL11O14625 94 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 GH2P01242 217 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 TSPY3P0CV98 308 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 TSPY8P0CW00 308 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 AKR1B1P15121 316 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 CTCFP49711 727 aaPredicted RBP14.74□□□□□ -0.05
HDAC1-210ENST00000490081 RBM25P49756 843 aaKnown RBP14.74□□□□□ -0.05
HDAC1-210ENST00000490081 TFAP4Q01664 338 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 INCENPQ9NQS7 918 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 ZSWIM5Q9P217 1185 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 NYAP2Q9P242 653 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 KCNH4Q9UQ05 1017 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 AFG3L2Q9Y4W6 797 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms