RNA–Protein interactions for RNA: ENST00000489944.1

SEMA6C-208, Transcript of semaphorin 6C, humanhuman

TSL 3

Gene SEMA6C, Length 423 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-208ENST00000489944 DDRGK1Q96HY6 314 aa14.37□□□□□ -0.11
SEMA6C-208ENST00000489944 ARHGAP39Q9C0H5 1083 aa14.37□□□□□ -0.11
SEMA6C-208ENST00000489944 DNAJC18Q9H819 358 aa14.37□□□□□ -0.11
SEMA6C-208ENST00000489944 CABP5Q9NP86 173 aa14.37□□□□□ -0.11
SEMA6C-208ENST00000489944 MORF4L1Q9UBU8 362 aa14.37□□□□□ -0.11
SEMA6C-208ENST00000489944 SWAP70Q9UH65 585 aa14.37□□□□□ -0.11
SEMA6C-208ENST00000489944 ZBTB21Q9ULJ3 1066 aa14.37□□□□□ -0.11
SEMA6C-208ENST00000489944 TNRC18O15417 2968 aaPredicted RBP14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 KIAA0100Q14667 2235 aaKnown RBP14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 FAM196BA6NMK8 535 aa14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 TNPO2O14787 897 aaKnown RBP14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 HMGCS2P54868 508 aa14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 DYNLL1P63167 89 aaKnown RBP14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 IRX3P78415 501 aaPredicted RBP14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 SLC4A8Q2Y0W8 1093 aa14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 LRRFIP1Q32MZ4 808 aaKnown RBP14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 USP17L2Q6R6M4 530 aa14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 AMOTL1Q8IY63 956 aa14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 MIGA1Q8NAN2 632 aa14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 C12orf42Q96LP6 360 aa14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 DCTPP1Q9H773 170 aa14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 SIPA1L1O43166 1804 aa14.36□□□□□ -0.11
SEMA6C-208ENST00000489944 MYO5AQ9Y4I1 1855 aaKnown RBP14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 MYH1P12882 1939 aa14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 TCRBV5S4A2TA0A5A2 114 aa14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 GOLIM4O00461 696 aa14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 POLR3DP05423 398 aaPredicted RBP14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 CERKLQ49MI3 558 aaPredicted RBP14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 DNAJC2Q99543 621 aaKnown RBP14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 KIAA1683Q9H0B3 1180 aa14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 ASCC2Q9H1I8 757 aaPredicted RBP14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 ZNF532Q9HCE3 1301 aa14.35□□□□□ -0.11
SEMA6C-208ENST00000489944 MGAMO43451 1857 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 POTEFA5A3E0 1075 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 GJB1P08034 283 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 ADD2P35612 726 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 GABPAQ06546 454 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 MTMR2Q13614 643 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 RRP1BQ14684 758 aaKnown RBP14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 ABCB5Q2M3G0 1257 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 TREML2Q5T2D2 321 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 TRMT44Q8IYL2 757 aaKnown RBP14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 CCDC17Q96LX7 622 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 ECHDC1Q9NTX5 307 aa14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 SAP30BPQ9UHR5 308 aaKnown RBP14.34□□□□□ -0.11
SEMA6C-208ENST00000489944 ZFYP08048 801 aaPredicted RBP14.33□□□□□ -0.12
SEMA6C-208ENST00000489944 CTGFP29279 349 aa14.33□□□□□ -0.12
SEMA6C-208ENST00000489944 PRKCZQ05513 592 aa14.33□□□□□ -0.12
SEMA6C-208ENST00000489944 TICAM2Q86XR7 235 aa14.33□□□□□ -0.12
SEMA6C-208ENST00000489944 ANKRD13CQ8N6S4 541 aa14.33□□□□□ -0.12
SEMA6C-208ENST00000489944 SOCS4Q8WXH5 440 aa14.33□□□□□ -0.12
SEMA6C-208ENST00000489944 MCM9Q9NXL9 1143 aa14.33□□□□□ -0.12
SEMA6C-208ENST00000489944 USP17L15C9J2P7 530 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 USP17L13C9JLJ4 530 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 USP17L11C9JVI0 530 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 USP17L18D6R9N7 530 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 USP17L22D6RA61 530 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 USP17L17D6RBQ6 530 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 USP17L19D6RCP7 530 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 USP17L20D6RJB6 530 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 APBB1O00213 710 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 ADCY3O60266 1144 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 GH2P01242 217 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 SLURP2P0DP57 97 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 XRCC5P13010 732 aaKnown RBP14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 MAPK4P31152 587 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 GJA8P48165 433 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 FLT3LGP49771 235 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 USP17L24Q0WX57 530 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 GIMAP6Q6P9H5 292 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 LBX2Q6XYB7 198 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 GPRC5AQ8NFJ5 357 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 SH3TC2Q8TF17 1288 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 BOLA2Q9H3K6 86 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 SH2D4AQ9H788 454 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 DCP1AQ9NPI6 582 aaPredicted RBP14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 CENPFP49454 3210 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 TTC41PQ6P2S7 1318 aa14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 DDX60LQ5H9U9 1706 aaKnown RBP14.32□□□□□ -0.12
SEMA6C-208ENST00000489944 ERC2O15083 957 aa14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 GLRX3O76003 335 aaKnown RBP14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 EN2P19622 333 aaPredicted RBP14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 HERVK_113P62684 666 aa14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 CCNA1P78396 465 aa14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 C20orf194Q5TEA3 1177 aa14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 TMEM179Q6ZVK1 233 aa14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 CCDC84Q86UT8 332 aaPredicted RBP14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 FEZ1Q99689 392 aa14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 BIN2Q9UBW5 565 aaPredicted RBP14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 RABGAP1Q9Y3P9 1069 aa14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 NDUFB9Q9Y6M9 179 aa14.31□□□□□ -0.12
SEMA6C-208ENST00000489944 GDF11O95390 407 aa14.3□□□□□ -0.12
SEMA6C-208ENST00000489944 SHMT1P34896 483 aa14.3□□□□□ -0.12
SEMA6C-208ENST00000489944 PLCD1P51178 756 aa14.3□□□□□ -0.12
SEMA6C-208ENST00000489944 LPAR1Q92633 364 aa14.3□□□□□ -0.12
SEMA6C-208ENST00000489944 EMILIN3Q9NT22 766 aa14.3□□□□□ -0.12
SEMA6C-208ENST00000489944 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.3□□□□□ -0.12
SEMA6C-208ENST00000489944 ARPP21Q9UBL0 812 aaPredicted RBP14.3□□□□□ -0.12
SEMA6C-208ENST00000489944 NAV1Q8NEY1 1877 aa14.29□□□□□ -0.12
SEMA6C-208ENST00000489944 HMGCRP04035 888 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms