RNA–Protein interactions for RNA: ENST00000489698.1

COPS9-203, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 640 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-203ENST00000489698 HOXD10P28358 340 aa29.41■■■□□ 2.3
COPS9-203ENST00000489698 TTC6Q86TZ1 520 aa29.41■■■□□ 2.3
COPS9-203ENST00000489698 CRNKL1Q9BZJ0 848 aaKnown RBP29.41■■■□□ 2.3
COPS9-203ENST00000489698 PNMA3Q9UL41 463 aa29.41■■■□□ 2.3
COPS9-203ENST00000489698 MYCP01106 439 aaPredicted RBP29.4■■■□□ 2.3
COPS9-203ENST00000489698 OSBPP22059 807 aa29.4■■■□□ 2.3
COPS9-203ENST00000489698 PRMT2P55345 433 aa29.4■■■□□ 2.3
COPS9-203ENST00000489698 SH3TC2Q8TF17 1288 aa29.4■■■□□ 2.3
COPS9-203ENST00000489698 HAUS7Q99871 368 aa29.4■■■□□ 2.3
COPS9-203ENST00000489698 WDR18Q9BV38 432 aa29.4■■■□□ 2.3
COPS9-203ENST00000489698 SRRDQ9UH36 339 aa29.4■■■□□ 2.3
COPS9-203ENST00000489698 SERPINB13Q9UIV8 391 aa29.4■■■□□ 2.3
COPS9-203ENST00000489698 ZBTB21Q9ULJ3 1066 aa29.4■■■□□ 2.3
COPS9-203ENST00000489698 TCRBV5S4A2TA0A5A2 114 aa29.39■■■□□ 2.3
COPS9-203ENST00000489698 POLR3DP05423 398 aaPredicted RBP29.39■■■□□ 2.3
COPS9-203ENST00000489698 FCGRTP55899 365 aa29.39■■■□□ 2.3
COPS9-203ENST00000489698 MTMR2Q13614 643 aa29.39■■■□□ 2.3
COPS9-203ENST00000489698 DCTPP1Q9H773 170 aa29.39■■■□□ 2.3
COPS9-203ENST00000489698 PABPC4Q13310 644 aaKnown RBP eCLIP29.38■■■□□ 2.292e-7■■■■□ 23.7
COPS9-203ENST00000489698 SLFNL1Q499Z3 407 aa29.38■■■□□ 2.29
COPS9-203ENST00000489698 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.38■■■□□ 2.29
COPS9-203ENST00000489698 GINM1Q9NU53 330 aa29.38■■■□□ 2.29
COPS9-203ENST00000489698 TMOD4Q9NZQ9 345 aa29.38■■■□□ 2.29
COPS9-203ENST00000489698 LOC285556D6RIA3 1793 aa29.37■■■□□ 2.29
COPS9-203ENST00000489698 RRP1P56182 461 aaKnown RBP29.37■■■□□ 2.29
COPS9-203ENST00000489698 BACE1P56817 501 aa29.37■■■□□ 2.29
COPS9-203ENST00000489698 SH3D19Q5HYK7 790 aa29.37■■■□□ 2.29
COPS9-203ENST00000489698 LCORLQ8N3X6 602 aa29.37■■■□□ 2.29
COPS9-203ENST00000489698 ANKRD13CQ8N6S4 541 aa29.37■■■□□ 2.29
COPS9-203ENST00000489698 RAET1EQ8TD07 263 aa29.37■■■□□ 2.29
COPS9-203ENST00000489698 EHD4Q9H223 541 aa29.37■■■□□ 2.29
COPS9-203ENST00000489698 MGAMO43451 1857 aa29.37■■■□□ 2.29
COPS9-203ENST00000489698 MYPNQ86TC9 1320 aa29.37■■■□□ 2.29
COPS9-203ENST00000489698 NAV1Q8NEY1 1877 aa29.36■■■□□ 2.29
COPS9-203ENST00000489698 GH2P01242 217 aa29.36■■■□□ 2.29
COPS9-203ENST00000489698 ADD2P35612 726 aa29.36■■■□□ 2.29
COPS9-203ENST00000489698 PLCD1P51178 756 aa29.36■■■□□ 2.29
COPS9-203ENST00000489698 SDR42E1Q8WUS8 393 aa29.36■■■□□ 2.29
COPS9-203ENST00000489698 ARMT1Q9H993 441 aa29.36■■■□□ 2.29
COPS9-203ENST00000489698 MCM9Q9NXL9 1143 aa29.36■■■□□ 2.29
COPS9-203ENST00000489698 TATDN1Q6P1N9 297 aa29.35■■■□□ 2.29
COPS9-203ENST00000489698 ECHDC1Q9NTX5 307 aa29.35■■■□□ 2.29
COPS9-203ENST00000489698 USP17L10C9JJH3 530 aa29.34■■■□□ 2.29
COPS9-203ENST00000489698 PRKCZQ05513 592 aa29.34■■■□□ 2.29
COPS9-203ENST00000489698 CERKLQ49MI3 558 aaPredicted RBP29.34■■■□□ 2.29
COPS9-203ENST00000489698 ASCC2Q9H1I8 757 aaPredicted RBP29.34■■■□□ 2.29
COPS9-203ENST00000489698 PCDHB15Q9Y5E8 787 aa29.34■■■□□ 2.29
COPS9-203ENST00000489698 C19orf81C9J6K1 198 aa29.33■■■□□ 2.29
COPS9-203ENST00000489698 MBD4O95243 580 aa29.33■■■□□ 2.29
COPS9-203ENST00000489698 MYH7P12883 1935 aa29.32■■■□□ 2.28
COPS9-203ENST00000489698 TNPO2O14787 897 aaKnown RBP29.32■■■□□ 2.28
COPS9-203ENST00000489698 CHGBP05060 677 aa29.32■■■□□ 2.28
COPS9-203ENST00000489698 RAB3GAP1Q15042 981 aa29.32■■■□□ 2.28
COPS9-203ENST00000489698 ABCB5Q2M3G0 1257 aa29.32■■■□□ 2.28
COPS9-203ENST00000489698 GPATCH3Q96I76 525 aa29.32■■■□□ 2.28
COPS9-203ENST00000489698 GABRQQ9UN88 632 aa29.32■■■□□ 2.28
COPS9-203ENST00000489698 GCLCP48506 637 aaPredicted RBP29.31■■■□□ 2.28
COPS9-203ENST00000489698 IRX3P78415 501 aaPredicted RBP29.31■■■□□ 2.28
COPS9-203ENST00000489698 CABP5Q9NP86 173 aa29.31■■■□□ 2.28
COPS9-203ENST00000489698 DCP1AQ9NPI6 582 aaPredicted RBP29.31■■■□□ 2.28
COPS9-203ENST00000489698 PRKAB2O43741 272 aa29.3■■■□□ 2.28
COPS9-203ENST00000489698 GRK4P32298 578 aa29.3■■■□□ 2.28
COPS9-203ENST00000489698 SHMT1P34896 483 aa29.3■■■□□ 2.28
COPS9-203ENST00000489698 EVX2Q03828 476 aa29.3■■■□□ 2.28
COPS9-203ENST00000489698 FAM110CQ1W6H9 321 aa29.3■■■□□ 2.28
COPS9-203ENST00000489698 TSHZ3Q63HK5 1081 aa29.3■■■□□ 2.28
COPS9-203ENST00000489698 ZSCAN25Q6NSZ9 544 aa29.3■■■□□ 2.28
COPS9-203ENST00000489698 FEZ1Q99689 392 aa29.3■■■□□ 2.28
COPS9-203ENST00000489698 BIN2Q9UBW5 565 aaPredicted RBP29.3■■■□□ 2.28
COPS9-203ENST00000489698 DDX60LQ5H9U9 1706 aaKnown RBP29.3■■■□□ 2.28
COPS9-203ENST00000489698 CYP2D6P10635 497 aa29.29■■■□□ 2.28
COPS9-203ENST00000489698 FXR1P51114 621 aaKnown RBP eCLIP29.29■■■□□ 2.28
COPS9-203ENST00000489698 UBE3CQ15386 1083 aa29.29■■■□□ 2.28
COPS9-203ENST00000489698 ZYXQ15942 572 aaKnown RBP29.29■■■□□ 2.28
COPS9-203ENST00000489698 CRBNQ96SW2 442 aa29.29■■■□□ 2.28
COPS9-203ENST00000489698 USP17L2Q6R6M4 530 aa29.28■■■□□ 2.28
COPS9-203ENST00000489698 EMILIN3Q9NT22 766 aa29.28■■■□□ 2.28
COPS9-203ENST00000489698 DOCK3Q8IZD9 2030 aa29.27■■■□□ 2.28
COPS9-203ENST00000489698 CEP290O15078 2479 aa29.27■■■□□ 2.28
COPS9-203ENST00000489698 HOXA7P31268 230 aaPredicted RBP29.27■■■□□ 2.28
COPS9-203ENST00000489698 FLT3LGP49771 235 aa29.27■■■□□ 2.28
COPS9-203ENST00000489698 COA7Q96BR5 231 aa29.27■■■□□ 2.28
COPS9-203ENST00000489698 P2RX7Q99572 595 aaKnown RBP29.27■■■□□ 2.28
COPS9-203ENST00000489698 TAOK2Q9UL54 1235 aa29.27■■■□□ 2.28
COPS9-203ENST00000489698 COLQQ9Y215 455 aaPredicted RBP29.27■■■□□ 2.28
COPS9-203ENST00000489698 BAZ2AQ9UIF9 1905 aaKnown RBP29.26■■■□□ 2.27
COPS9-203ENST00000489698 MPHOSPH10O00566 681 aaKnown RBP29.26■■■□□ 2.27
COPS9-203ENST00000489698 GABPAQ06546 454 aa29.26■■■□□ 2.27
COPS9-203ENST00000489698 MTFR1Q15390 333 aa29.26■■■□□ 2.27
COPS9-203ENST00000489698 ATP8A2Q9NTI2 1148 aa29.26■■■□□ 2.27
COPS9-203ENST00000489698 DDRGK1Q96HY6 314 aa29.25■■■□□ 2.27
COPS9-203ENST00000489698 PUS7LQ9H0K6 701 aaKnown RBP29.25■■■□□ 2.27
COPS9-203ENST00000489698 SLC4A4Q9Y6R1 1079 aa29.25■■■□□ 2.27
COPS9-203ENST00000489698 ADCY3O60266 1144 aa29.24■■■□□ 2.27
COPS9-203ENST00000489698 SLC44A5Q8NCS7 719 aa29.24■■■□□ 2.27
COPS9-203ENST00000489698 SLAIN1Q8ND83 568 aa29.24■■■□□ 2.27
COPS9-203ENST00000489698 ACER1Q8TDN7 264 aa29.24■■■□□ 2.27
COPS9-203ENST00000489698 DYNLL2Q96FJ2 89 aa29.24■■■□□ 2.27
COPS9-203ENST00000489698 HERVK_113P62684 666 aa29.23■■■□□ 2.27
COPS9-203ENST00000489698 UBXN2AP68543 259 aa29.23■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms