RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 RILPL2Q969X0 211 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 OSBPL3Q9H4L5 887 aa18.9■□□□□ 0.62
LMX1A-204ENST00000489443 GSG1L2A8MUP6 293 aa18.89■□□□□ 0.61
LMX1A-204ENST00000489443 APPP05067 770 aa18.89■□□□□ 0.61
LMX1A-204ENST00000489443 SHMT1P34896 483 aa18.89■□□□□ 0.61
LMX1A-204ENST00000489443 MOGSQ13724 837 aa18.89■□□□□ 0.61
LMX1A-204ENST00000489443 CERKLQ49MI3 558 aaPredicted RBP18.89■□□□□ 0.61
LMX1A-204ENST00000489443 GADL1Q6ZQY3 521 aa18.89■□□□□ 0.61
LMX1A-204ENST00000489443 ZNF280CQ8ND82 737 aa18.89■□□□□ 0.61
LMX1A-204ENST00000489443 DYNLL2Q96FJ2 89 aa18.89■□□□□ 0.61
LMX1A-204ENST00000489443 ZFYVE28Q9HCC9 887 aa18.89■□□□□ 0.61
LMX1A-204ENST00000489443 ZBTB21Q9ULJ3 1066 aa18.89■□□□□ 0.61
LMX1A-204ENST00000489443 A0A0G2JLL6 359 aaPredicted RBP18.88■□□□□ 0.61
LMX1A-204ENST00000489443 GH2P01242 217 aa18.88■□□□□ 0.61
LMX1A-204ENST00000489443 GNAT2P19087 354 aa18.88■□□□□ 0.61
LMX1A-204ENST00000489443 PDE4AP27815 886 aa18.88■□□□□ 0.61
LMX1A-204ENST00000489443 GABPAQ06546 454 aa18.88■□□□□ 0.61
LMX1A-204ENST00000489443 C12orf60Q5U649 245 aa18.88■□□□□ 0.61
LMX1A-204ENST00000489443 FASTKD5Q7L8L6 764 aaKnown RBP18.88■□□□□ 0.61
LMX1A-204ENST00000489443 PRRT2Q7Z6L0 340 aaPredicted RBP18.88■□□□□ 0.61
LMX1A-204ENST00000489443 ANKRD23Q86SG2 305 aa18.88■□□□□ 0.61
LMX1A-204ENST00000489443 AS3MTQ9HBK9 375 aa18.88■□□□□ 0.61
LMX1A-204ENST00000489443 PTPRFP10586 1907 aa18.88■□□□□ 0.61
LMX1A-204ENST00000489443 SMIM22K7EJ46 135 aa18.87■□□□□ 0.61
LMX1A-204ENST00000489443 PDHXO00330 501 aa18.87■□□□□ 0.61
LMX1A-204ENST00000489443 FKTNO75072 461 aa18.87■□□□□ 0.61
LMX1A-204ENST00000489443 ABCB5Q2M3G0 1257 aa18.87■□□□□ 0.61
LMX1A-204ENST00000489443 NOM1Q5C9Z4 860 aaKnown RBP18.87■□□□□ 0.61
LMX1A-204ENST00000489443 CTR9Q6PD62 1173 aa18.87■□□□□ 0.61
LMX1A-204ENST00000489443 SLC44A5Q8NCS7 719 aa18.87■□□□□ 0.61
LMX1A-204ENST00000489443 TBC1D2Q9BYX2 928 aa18.87■□□□□ 0.61
LMX1A-204ENST00000489443 ZCCHC17Q9NP64 241 aaKnown RBP18.87■□□□□ 0.61
LMX1A-204ENST00000489443 GINM1Q9NU53 330 aa18.87■□□□□ 0.61
LMX1A-204ENST00000489443 MYH8P13535 1937 aa18.86■□□□□ 0.61
LMX1A-204ENST00000489443 PATL2C9JE40 543 aaKnown RBP18.86■□□□□ 0.61
LMX1A-204ENST00000489443 TDO2P48775 406 aa18.86■□□□□ 0.61
LMX1A-204ENST00000489443 RAB3GAP1Q15042 981 aa18.86■□□□□ 0.61
LMX1A-204ENST00000489443 GPAT2Q6NUI2 795 aa18.86■□□□□ 0.61
LMX1A-204ENST00000489443 GIMAP6Q6P9H5 292 aa18.86■□□□□ 0.61
LMX1A-204ENST00000489443 CCDC129Q6ZRS4 1044 aa18.86■□□□□ 0.61
LMX1A-204ENST00000489443 WDR18Q9BV38 432 aa18.86■□□□□ 0.61
LMX1A-204ENST00000489443 CABP5Q9NP86 173 aa18.86■□□□□ 0.61
LMX1A-204ENST00000489443 SWAP70Q9UH65 585 aa18.86■□□□□ 0.61
LMX1A-204ENST00000489443 MINDY4BA8MYZ0 360 aa18.85■□□□□ 0.61
LMX1A-204ENST00000489443 MPHOSPH10O00566 681 aaKnown RBP18.85■□□□□ 0.61
LMX1A-204ENST00000489443 HMGCS2P54868 508 aa18.85■□□□□ 0.61
LMX1A-204ENST00000489443 DGKZQ13574 1117 aa18.85■□□□□ 0.61
LMX1A-204ENST00000489443 FAM227BQ96M60 508 aa18.85■□□□□ 0.61
LMX1A-204ENST00000489443 EPB41L4AQ9HCS5 686 aaPredicted RBP18.85■□□□□ 0.61
LMX1A-204ENST00000489443 ARPP21Q9UBL0 812 aaPredicted RBP18.85■□□□□ 0.61
LMX1A-204ENST00000489443 CDK8P49336 464 aa18.84■□□□□ 0.61
LMX1A-204ENST00000489443 MTMR2Q13614 643 aa18.84■□□□□ 0.61
LMX1A-204ENST00000489443 SBK1Q52WX2 424 aa18.84■□□□□ 0.61
LMX1A-204ENST00000489443 IFNL3Q8IZI9 196 aa18.84■□□□□ 0.61
LMX1A-204ENST00000489443 STK11IPQ8N1F8 1099 aa18.84■□□□□ 0.61
LMX1A-204ENST00000489443 NACAP1Q9BZK3 213 aa18.84■□□□□ 0.61
LMX1A-204ENST00000489443 HELLSQ9NRZ9 838 aa18.84■□□□□ 0.61
LMX1A-204ENST00000489443 A0A0D9SFI3 127 aa18.83■□□□□ 0.6
LMX1A-204ENST00000489443 TLR2O60603 784 aa18.83■□□□□ 0.6
LMX1A-204ENST00000489443 BACE1P56817 501 aa18.83■□□□□ 0.6
LMX1A-204ENST00000489443 SP3Q02447 781 aa18.83■□□□□ 0.6
LMX1A-204ENST00000489443 NMIQ13287 307 aaPredicted RBP18.83■□□□□ 0.6
LMX1A-204ENST00000489443 TICAM2Q86XR7 235 aa18.83■□□□□ 0.6
LMX1A-204ENST00000489443 PROCA1Q8NCQ7 364 aaPredicted RBP18.83■□□□□ 0.6
LMX1A-204ENST00000489443 USP17L10C9JJH3 530 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 NEFLP07196 543 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 CYP2C8P10632 490 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 SEPT2Q15019 361 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 MCMDC2Q4G0Z9 681 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 TREML2Q5T2D2 321 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 C16orf86Q6ZW13 317 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 CTU1Q7Z7A3 348 aaKnown RBP18.82■□□□□ 0.6
LMX1A-204ENST00000489443 PARK7Q99497 189 aaKnown RBP18.82■□□□□ 0.6
LMX1A-204ENST00000489443 MCOLN1Q9GZU1 580 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 TMOD4Q9NZQ9 345 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 TAOK2Q9UL54 1235 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 AGTPBP1Q9UPW5 1226 aa18.82■□□□□ 0.6
LMX1A-204ENST00000489443 C19orf81C9J6K1 198 aa18.81■□□□□ 0.6
LMX1A-204ENST00000489443 SDSP20132 328 aa18.81■□□□□ 0.6
LMX1A-204ENST00000489443 GUCY1A2P33402 732 aa18.81■□□□□ 0.6
LMX1A-204ENST00000489443 SH3D19Q5HYK7 790 aa18.81■□□□□ 0.6
LMX1A-204ENST00000489443 TTC22Q5TAA0 569 aa18.81■□□□□ 0.6
LMX1A-204ENST00000489443 CD99L2Q8TCZ2 262 aa18.81■□□□□ 0.6
LMX1A-204ENST00000489443 FEZ1Q99689 392 aa18.81■□□□□ 0.6
LMX1A-204ENST00000489443 NAPBQ9H115 298 aa18.81■□□□□ 0.6
LMX1A-204ENST00000489443 CPA4Q9UI42 421 aa18.81■□□□□ 0.6
LMX1A-204ENST00000489443 CENPBP07199 599 aaPredicted RBP18.8■□□□□ 0.6
LMX1A-204ENST00000489443 AKR1B1P15121 316 aa18.8■□□□□ 0.6
LMX1A-204ENST00000489443 ZYXQ15942 572 aaKnown RBP18.8■□□□□ 0.6
LMX1A-204ENST00000489443 VPS53Q5VIR6 699 aa18.8■□□□□ 0.6
LMX1A-204ENST00000489443 ACER1Q8TDN7 264 aa18.8■□□□□ 0.6
LMX1A-204ENST00000489443 ERO1AQ96HE7 468 aa18.8■□□□□ 0.6
LMX1A-204ENST00000489443 CCDC17Q96LX7 622 aa18.8■□□□□ 0.6
LMX1A-204ENST00000489443 MKNK2Q9HBH9 465 aa18.8■□□□□ 0.6
LMX1A-204ENST00000489443 DIAPH3Q9NSV4 1193 aa18.8■□□□□ 0.6
LMX1A-204ENST00000489443 SLC45A1Q9Y2W3 748 aa18.8■□□□□ 0.6
LMX1A-204ENST00000489443 LOC285556D6RIA3 1793 aa18.79■□□□□ 0.6
LMX1A-204ENST00000489443 PABPC4Q13310 644 aaKnown RBP eCLIP18.79■□□□□ 0.6
LMX1A-204ENST00000489443 C17orf99Q6UX52 265 aa18.79■□□□□ 0.6
LMX1A-204ENST00000489443 TMEM179Q6ZVK1 233 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms