RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 PDIA3P30101 505 aaKnown RBP24.52■■□□□ 1.52
SND1-214ENST00000489417 SEC23AQ15436 765 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 CWC22Q9HCG8 908 aaKnown RBP24.52■■□□□ 1.52
SND1-214ENST00000489417 PI4KBQ9UBF8 816 aa24.52■■□□□ 1.52
SND1-214ENST00000489417 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.52■■□□□ 1.52
SND1-214ENST00000489417 CCDC69A6NI79 296 aa24.51■■□□□ 1.51
SND1-214ENST00000489417 GOLGA8BA8MQT2 603 aa24.51■■□□□ 1.51
SND1-214ENST00000489417 DDNO94850 711 aaPredicted RBP24.51■■□□□ 1.51
SND1-214ENST00000489417 DDIT3P35638 169 aa24.51■■□□□ 1.51
SND1-214ENST00000489417 FAM83AQ86UY5 434 aa24.51■■□□□ 1.51
SND1-214ENST00000489417 TMTC2Q8N394 836 aa24.51■■□□□ 1.51
SND1-214ENST00000489417 SIPA1L1O43166 1804 aa24.5■■□□□ 1.51
SND1-214ENST00000489417 TSPY3P0CV98 308 aa24.5■■□□□ 1.51
SND1-214ENST00000489417 TSPY8P0CW00 308 aa24.5■■□□□ 1.51
SND1-214ENST00000489417 CRACR2BQ8N4Y2 399 aaPredicted RBP24.5■■□□□ 1.51
SND1-214ENST00000489417 ENAHQ8N8S7 591 aaPredicted RBP24.5■■□□□ 1.51
SND1-214ENST00000489417 SCRN1Q12765 414 aa24.49■■□□□ 1.51
SND1-214ENST00000489417 CCDC178Q5BJE1 867 aa24.49■■□□□ 1.51
SND1-214ENST00000489417 APOA5Q6Q788 366 aa24.49■■□□□ 1.51
SND1-214ENST00000489417 FOXP4Q8IVH2 680 aaPredicted RBP24.49■■□□□ 1.51
SND1-214ENST00000489417 TRIM34Q9BYJ4 488 aa24.49■■□□□ 1.51
SND1-214ENST00000489417 TCP11L1Q9NUJ3 509 aa24.49■■□□□ 1.51
SND1-214ENST00000489417 ZC3H4Q9UPT8 1303 aaKnown RBP24.49■■□□□ 1.51
SND1-214ENST00000489417 SHMT1P34896 483 aa24.48■■□□□ 1.51
SND1-214ENST00000489417 TNNI2P48788 182 aa24.48■■□□□ 1.51
SND1-214ENST00000489417 NEDD1Q8NHV4 660 aa24.48■■□□□ 1.51
SND1-214ENST00000489417 CHMP4CQ96CF2 233 aa24.48■■□□□ 1.51
SND1-214ENST00000489417 CIZ1Q9ULV3 898 aaPredicted RBP24.48■■□□□ 1.51
SND1-214ENST00000489417 HPS5Q9UPZ3 1129 aa24.48■■□□□ 1.51
SND1-214ENST00000489417 SMC3Q9UQE7 1217 aa24.48■■□□□ 1.51
SND1-214ENST00000489417 SLC12A7Q9Y666 1083 aa24.48■■□□□ 1.51
SND1-214ENST00000489417 NMT2O60551 498 aa24.47■■□□□ 1.51
SND1-214ENST00000489417 LMOD1P29536 600 aaPredicted RBP24.47■■□□□ 1.51
SND1-214ENST00000489417 EPS15P42566 896 aa24.47■■□□□ 1.51
SND1-214ENST00000489417 CCT2P78371 535 aaKnown RBP24.47■■□□□ 1.51
SND1-214ENST00000489417 TNFAIP1Q13829 316 aa24.47■■□□□ 1.51
SND1-214ENST00000489417 IFIT1BQ5T764 474 aaKnown RBP24.47■■□□□ 1.51
SND1-214ENST00000489417 SYNE3Q6ZMZ3 975 aa24.47■■□□□ 1.51
SND1-214ENST00000489417 METTL16Q86W50 562 aaKnown RBP24.47■■□□□ 1.51
SND1-214ENST00000489417 CSRNP1Q96S65 589 aa24.47■■□□□ 1.51
SND1-214ENST00000489417 DNAJC18Q9H819 358 aa24.47■■□□□ 1.51
SND1-214ENST00000489417 CHMP5Q9NZZ3 219 aa24.47■■□□□ 1.51
SND1-214ENST00000489417 ZBTB43O43298 467 aa24.46■■□□□ 1.51
SND1-214ENST00000489417 RAB11FIP4Q86YS3 637 aa24.46■■□□□ 1.51
SND1-214ENST00000489417 TRPM4Q8TD43 1214 aa24.46■■□□□ 1.51
SND1-214ENST00000489417 IL17RBQ9NRM6 502 aa24.46■■□□□ 1.51
SND1-214ENST00000489417 PLIN4Q96Q06 1357 aa24.46■■□□□ 1.51
SND1-214ENST00000489417 DPY19L2Q6NUT2 758 aa24.45■■□□□ 1.51
SND1-214ENST00000489417 ZNF654Q8IZM8 581 aa24.45■■□□□ 1.51
SND1-214ENST00000489417 TMEM39BQ9GZU3 492 aa24.45■■□□□ 1.51
SND1-214ENST00000489417 NCOA5Q9HCD5 579 aaKnown RBP24.45■■□□□ 1.51
SND1-214ENST00000489417 HACL1Q9UJ83 578 aa24.45■■□□□ 1.51
SND1-214ENST00000489417 ASTN2O75129 1339 aaPredicted RBP24.45■■□□□ 1.5
SND1-214ENST00000489417 SLURP2P0DP57 97 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 METAP2P50579 478 aaKnown RBP eCLIP24.44■■□□□ 1.59e-10■■□□□ 12.4
SND1-214ENST00000489417 DGKHQ86XP1 1220 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 ANKS1AQ92625 1134 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 LLPHQ9BRT6 129 aaKnown RBP24.44■■□□□ 1.5
SND1-214ENST00000489417 FAM196BA6NMK8 535 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 GOLGA8AA7E2F4 631 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 AKR1B1P15121 316 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 RCAN1P53805 252 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 RASA3Q14644 834 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 RCSD1Q6JBY9 416 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 MICU3Q86XE3 530 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 CCDC17Q96LX7 622 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 MYL10Q9BUA6 226 aa24.44■■□□□ 1.5
SND1-214ENST00000489417 HERC5Q9UII4 1024 aaKnown RBP24.44■■□□□ 1.5
SND1-214ENST00000489417 MYH8P13535 1937 aa24.43■■□□□ 1.5
SND1-214ENST00000489417 NID2Q14112 1375 aa24.43■■□□□ 1.5
SND1-214ENST00000489417 SRCAPQ6ZRS2 3230 aa24.43■■□□□ 1.5
SND1-214ENST00000489417 GJB2P29033 226 aa24.43■■□□□ 1.5
SND1-214ENST00000489417 TATDN1Q6P1N9 297 aa24.43■■□□□ 1.5
SND1-214ENST00000489417 CATIPQ7Z7H3 387 aa24.43■■□□□ 1.5
SND1-214ENST00000489417 ADARB2Q9NS39 739 aaKnown RBP24.43■■□□□ 1.5
SND1-214ENST00000489417 PGAP2Q9UHJ9 254 aa24.43■■□□□ 1.5
SND1-214ENST00000489417 DHX16O60231 1041 aaKnown RBP24.42■■□□□ 1.5
SND1-214ENST00000489417 RXRAP19793 462 aa24.42■■□□□ 1.5
SND1-214ENST00000489417 APOBEC3FQ8IUX4 373 aaKnown RBP24.42■■□□□ 1.5
SND1-214ENST00000489417 NSUN7Q8NE18 718 aaKnown RBP24.42■■□□□ 1.5
SND1-214ENST00000489417 L3MBTL3Q96JM7 780 aaPredicted RBP24.42■■□□□ 1.5
SND1-214ENST00000489417 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.42■■□□□ 1.5
SND1-214ENST00000489417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.42■■□□□ 1.5
SND1-214ENST00000489417 IGKV6D-41A0A0C4DH26 115 aa24.41■■□□□ 1.5
SND1-214ENST00000489417 HIRAP54198 1017 aaPredicted RBP24.41■■□□□ 1.5
SND1-214ENST00000489417 CERKLQ49MI3 558 aaPredicted RBP24.41■■□□□ 1.5
SND1-214ENST00000489417 ANGEL2Q5VTE6 544 aaKnown RBP24.41■■□□□ 1.5
SND1-214ENST00000489417 KAT14Q9H8E8 782 aa24.41■■□□□ 1.5
SND1-214ENST00000489417 JAK2O60674 1132 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 DTNBO60941 627 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 DDAH1O94760 285 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 CTDNEP1O95476 244 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 CALM1P0DP23 149 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 CALM2P0DP24 149 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 CALM3P0DP25 149 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 CDAN1Q8IWY9 1227 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 CCDC144CPQ8IYA2 1237 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 SMARCC2Q8TAQ2 1214 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 CEP95Q96GE4 821 aa24.4■■□□□ 1.5
SND1-214ENST00000489417 SCAF8Q9UPN6 1271 aaKnown RBP24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms