RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 RUNDC1Q96C34 613 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 AS3MTQ9HBK9 375 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 TMEM39AQ9NV64 488 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 IFT57Q9NWB7 429 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 MYH2Q9UKX2 1941 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 CHD9Q3L8U1 2897 aa14.54□□□□□ -0.08
HDAC6-233ENST00000489352 ATRNL1Q5VV63 1379 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 PRR33A8MZF0 331 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 ERC2O15083 957 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 PEX10O60683 326 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 ITGB8P26012 769 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 MAP3K10Q02779 954 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 C1orf53Q5VUE5 145 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 DNAAF4Q8WXU2 420 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 HERVK_113Q902F9 699 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 PORCNQ9H237 461 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 TXNRD2Q9NNW7 524 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 C11orf16Q9NQ32 467 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 IVNS1ABPQ9Y6Y0 642 aa14.53□□□□□ -0.08
HDAC6-233ENST00000489352 GBF1Q92538 1859 aa14.52□□□□□ -0.08
HDAC6-233ENST00000489352 LRRC37A2A6NM11 1700 aa14.52□□□□□ -0.08
HDAC6-233ENST00000489352 USP17L5A8MUK1 530 aa14.52□□□□□ -0.09
HDAC6-233ENST00000489352 GRXCR1A8MXD5 290 aa14.52□□□□□ -0.09
HDAC6-233ENST00000489352 KIAA0355O15063 1070 aa14.52□□□□□ -0.09
HDAC6-233ENST00000489352 SLC4A2P04920 1241 aa14.52□□□□□ -0.09
HDAC6-233ENST00000489352 LDHBP07195 334 aaKnown RBP14.52□□□□□ -0.09
HDAC6-233ENST00000489352 CYP2C19P33261 490 aa14.52□□□□□ -0.09
HDAC6-233ENST00000489352 FKBP5Q13451 457 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-233ENST00000489352 METTL24Q5JXM2 366 aa14.52□□□□□ -0.09
HDAC6-233ENST00000489352 ANO1Q5XXA6 986 aa14.52□□□□□ -0.09
HDAC6-233ENST00000489352 GTF3C2Q8WUA4 911 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-233ENST00000489352 OSBPL5Q9H0X9 879 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-233ENST00000489352 FLRT1Q9NZU1 646 aa14.52□□□□□ -0.09
HDAC6-233ENST00000489352 PI4K2BG5E9Z4 385 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 PQBP1O60828 265 aaKnown RBP14.51□□□□□ -0.09
HDAC6-233ENST00000489352 ZNF853P0CG23 659 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 CCNA1P78396 465 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 FOXK2Q01167 660 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 PICALMQ13492 652 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 Q3C1V9 767 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 SH3D19Q5HYK7 790 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 SLC44A5Q8NCS7 719 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.51□□□□□ -0.092e-7■■■□□ 16.9
HDAC6-233ENST00000489352 IDI2Q9BXS1 227 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 PUS3Q9BZE2 481 aaKnown RBP14.51□□□□□ -0.09
HDAC6-233ENST00000489352 RBPJLQ9UBG7 517 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 COG5Q9UP83 839 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 NDUFB9Q9Y6M9 179 aa14.51□□□□□ -0.09
HDAC6-233ENST00000489352 DDTLA6NHG4 134 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-233ENST00000489352 HOXA7P31268 230 aaPredicted RBP14.5□□□□□ -0.09
HDAC6-233ENST00000489352 PPIGQ13427 754 aaKnown RBP eCLIP14.5□□□□□ -0.091e-7■■■□□ 17.5
HDAC6-233ENST00000489352 G2E3Q7L622 706 aa14.5□□□□□ -0.09
HDAC6-233ENST00000489352 SH3BP5LQ7L8J4 393 aa14.5□□□□□ -0.09
HDAC6-233ENST00000489352 WDFY4Q6ZS81 3184 aa14.49□□□□□ -0.09
HDAC6-233ENST00000489352 SLC15A5A6NIM6 579 aa14.49□□□□□ -0.09
HDAC6-233ENST00000489352 DCDC2CA8MYV0 355 aa14.49□□□□□ -0.09
HDAC6-233ENST00000489352 APBB1O00213 710 aa14.49□□□□□ -0.09
HDAC6-233ENST00000489352 GTPBP6O43824 516 aaPredicted RBP14.49□□□□□ -0.09
HDAC6-233ENST00000489352 IFIT1P09914 478 aaKnown RBP14.49□□□□□ -0.09
HDAC6-233ENST00000489352 SLURP2P0DP57 97 aa14.49□□□□□ -0.09
HDAC6-233ENST00000489352 MTMR2Q13614 643 aa14.49□□□□□ -0.09
HDAC6-233ENST00000489352 KCNH6Q9H252 994 aa14.49□□□□□ -0.09
HDAC6-233ENST00000489352 NKX2-4Q9H2Z4 354 aa14.49□□□□□ -0.09
HDAC6-233ENST00000489352 CACNA1FO60840 1977 aa14.49□□□□□ -0.09
HDAC6-233ENST00000489352 TBC1D12O60347 775 aa14.48□□□□□ -0.09
HDAC6-233ENST00000489352 WDR43Q15061 677 aaKnown RBP eCLIP14.48□□□□□ -0.09
HDAC6-233ENST00000489352 LRRC41Q15345 812 aa14.48□□□□□ -0.09
HDAC6-233ENST00000489352 KHSRPQ92945 711 aaKnown RBP eCLIP14.48□□□□□ -0.09
HDAC6-233ENST00000489352 MTIF3Q9H2K0 278 aaKnown RBP14.48□□□□□ -0.09
HDAC6-233ENST00000489352 TRANK1O15050 2925 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 SEPT4O43236 478 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 TLL1O43897 1013 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 PDE8BO95263 885 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 CYBAP13498 195 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 PRDX5P30044 214 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 CAP2P40123 477 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 BACE1P56817 501 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 FLIIQ13045 1269 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 EPHA10Q5JZY3 1008 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 DPP9Q86TI2 863 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 TRPV1Q8NER1 839 aa14.47□□□□□ -0.09
HDAC6-233ENST00000489352 C9orf78Q9NZ63 289 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-233ENST00000489352 FAM196BA6NMK8 535 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 C19orf81C9J6K1 198 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 TIMP1P01033 207 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 PTPREP23469 700 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 TMEM240Q5SV17 173 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 SLF2Q8IX21 1173 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 TSPYL6Q8N831 410 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 HLA-CQ95604 372 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 FBXL18Q96ME1 805 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 CHD7Q9P2D1 2997 aa14.46□□□□□ -0.09
HDAC6-233ENST00000489352 PRRC2BQ5JSZ5 2229 aaKnown RBP14.46□□□□□ -0.1
HDAC6-233ENST00000489352 SMCHD1A6NHR9 2005 aa14.45□□□□□ -0.1
HDAC6-233ENST00000489352 ST18O60284 1047 aa14.45□□□□□ -0.1
HDAC6-233ENST00000489352 PPP2R2DQ66LE6 453 aa14.45□□□□□ -0.1
HDAC6-233ENST00000489352 MFSD5Q6N075 450 aa14.45□□□□□ -0.1
HDAC6-233ENST00000489352 PSRC1Q6PGN9 363 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-233ENST00000489352 RNF180Q86T96 592 aa14.45□□□□□ -0.1
HDAC6-233ENST00000489352 TMEM199Q8N511 208 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms