RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 NAV1Q8NEY1 1877 aa10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 USP17L3A6NCW0 530 aa10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 USP17L4A6NCW7 530 aa10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 GOLGA6L19H0YKK7 550 aa10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 FGD1P98174 961 aa10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 HDLBPQ00341 1268 aaKnown RBP10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 IQCB1Q15051 598 aa10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 STOX1Q6ZVD7 989 aa10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 USP17L1Q7RTZ2 530 aa10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 TAOK3Q9H2K8 898 aa10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 EPB41L4AQ9HCS5 686 aaPredicted RBP10.42□□□□□ -0.74
EXOSC1-211ENST00000489158 CDK5RAP2Q96SN8 1893 aa10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 GPR75-ASB3A0A0A6YYF3 556 aa10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 JAK2O60674 1132 aa10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 NT5C2P49902 561 aa10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 TRDNQ13061 729 aa10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 PTPN14Q15678 1187 aa10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 KMT5BQ4FZB7 885 aa10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 C11orf57Q6ZUT1 292 aaPredicted RBP10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 RALYLQ86SE5 291 aaKnown RBP10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 ZNF397Q8NF99 534 aaPredicted RBP10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 ZNF215Q9UL58 517 aaPredicted RBP10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 WDR19Q8NEZ3 1342 aa10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 BAZ2AQ9UIF9 1905 aaKnown RBP10.41□□□□□ -0.74
EXOSC1-211ENST00000489158 MINDY4BA8MYZ0 360 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 PCP11498 1178 aaKnown RBP10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 IARSP41252 1262 aaKnown RBP10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 RESTQ13127 1097 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 DACT2Q5SW24 774 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 TAF3Q5VWG9 929 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 HHIPL2Q6UWX4 724 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 STK11IPQ8N1F8 1099 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 LARGE2Q8N3Y3 721 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 DDX11Q96FC9 970 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 TRMT1Q9NXH9 659 aaKnown RBP10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 ANAPC4Q9UJX5 808 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 BCS1LQ9Y276 419 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 DDX60LQ5H9U9 1706 aaKnown RBP10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 NEMFO60524 1076 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 CAVIN2O95810 425 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 SKILP12757 684 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 SARM1Q6SZW1 724 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 NYAP1Q6ZVC0 841 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 NIM1KQ8IY84 436 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 KRT222Q8N1A0 295 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 NCOA7Q8NI08 942 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 MXD3Q9BW11 206 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 LRRC2Q9BYS8 371 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 RNF41Q9H4P4 317 aaPredicted RBP10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 CNNM2Q9H8M5 875 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 KCNQ5Q9NR82 932 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 TOMM22Q9NS69 142 aa10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 ARPP21Q9UBL0 812 aaPredicted RBP10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 TTF2Q9UNY4 1162 aaKnown RBP10.4□□□□□ -0.74
EXOSC1-211ENST00000489158 ECM29Q5VYK3 1845 aa10.4□□□□□ -0.75
EXOSC1-211ENST00000489158 CCDC69A6NI79 296 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 BTDP43251 543 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 USP5P45974 858 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 MMP14P50281 582 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 CEBPZQ03701 1054 aaKnown RBP10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 TERF2Q15554 542 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 SBK1Q52WX2 424 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 Q6ZUG5 572 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 DHX32Q7L7V1 743 aaKnown RBP10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 CHST3Q7LGC8 479 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 FBXL16Q8N461 479 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 CERS5Q8N5B7 392 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 BRF1Q92994 677 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 TEKT1Q969V4 418 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 MRFAP1L1Q96HT8 127 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 ZNF277Q9NRM2 450 aaPredicted RBP10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 A0A087WWV3 80 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 H3BQV1 296 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 CCZ1BP86790 482 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 CCZ1P86791 482 aaPredicted RBP10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 CTDSPL2Q05D32 466 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 ELF2Q15723 593 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 STX1AQ16623 288 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 IFFO2Q5TF58 517 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 FILIP1Q7Z7B0 1213 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 TBC1D10CQ8IV04 446 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 AMOTL1Q8IY63 956 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 STAG1Q8WVM7 1258 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 KRT23Q9C075 422 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 ZNRF3Q9ULT6 936 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 DAGLAQ9Y4D2 1042 aa10.39□□□□□ -0.75
EXOSC1-211ENST00000489158 SCNN1DP51172 638 aa10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 PPARAQ07869 468 aa10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 FBXO38Q6PIJ6 1188 aa10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 MFSD6Q6ZSS7 791 aa10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 KIAA0825Q8IV33 1275 aa10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 CCAR1Q8IX12 1150 aaKnown RBP10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 SH3RF3Q8TEJ3 882 aaPredicted RBP10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 ERO1AQ96HE7 468 aa10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 MTA3Q9BTC8 594 aa10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 DCP1AQ9NPI6 582 aaPredicted RBP10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 SERPINA10Q9UK55 444 aa10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 COL4A5P29400 1685 aa10.38□□□□□ -0.75
EXOSC1-211ENST00000489158 YDJCA8MPS7 323 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms