RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 POTEEQ6S8J3 1075 aa20.01■□□□□ 0.79
USP48-210ENST00000489108 PI16Q6UXB8 463 aa20.01■□□□□ 0.79
USP48-210ENST00000489108 GPR142Q7Z601 462 aa20.01■□□□□ 0.79
USP48-210ENST00000489108 TEX11Q8IYF3 940 aa20.01■□□□□ 0.79
USP48-210ENST00000489108 SENP6Q9GZR1 1112 aaPredicted RBP20.01■□□□□ 0.79
USP48-210ENST00000489108 PI4KBQ9UBF8 816 aa20.01■□□□□ 0.79
USP48-210ENST00000489108 C19orf81C9J6K1 198 aa20■□□□□ 0.79
USP48-210ENST00000489108 ASNSP08243 561 aa20■□□□□ 0.79
USP48-210ENST00000489108 TFCP2Q12800 502 aa20■□□□□ 0.79
USP48-210ENST00000489108 SHROOM1Q2M3G4 852 aaPredicted RBP20■□□□□ 0.79
USP48-210ENST00000489108 PLEKHH3Q7Z736 793 aa20■□□□□ 0.79
USP48-210ENST00000489108 SH3RF3Q8TEJ3 882 aaPredicted RBP20■□□□□ 0.79
USP48-210ENST00000489108 NEUROD6Q96NK8 337 aa20■□□□□ 0.79
USP48-210ENST00000489108 PAGR1Q9BTK6 254 aa20■□□□□ 0.79
USP48-210ENST00000489108 RAI14Q9P0K7 980 aa20■□□□□ 0.79
USP48-210ENST00000489108 AKAP2Q9Y2D5 859 aa20■□□□□ 0.79
USP48-210ENST00000489108 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20■□□□□ 0.79
USP48-210ENST00000489108 USP17L10C9JJH3 530 aa19.99■□□□□ 0.79
USP48-210ENST00000489108 SPATA5Q8NB90 893 aa19.99■□□□□ 0.79
USP48-210ENST00000489108 VCANP13611 3396 aa19.98■□□□□ 0.79
USP48-210ENST00000489108 ATN1P54259 1190 aaPredicted RBP19.98■□□□□ 0.79
USP48-210ENST00000489108 ZNF697Q5TEC3 545 aa19.98■□□□□ 0.79
USP48-210ENST00000489108 APBA2Q99767 749 aa19.98■□□□□ 0.79
USP48-210ENST00000489108 SIPA1L1O43166 1804 aa19.97■□□□□ 0.79
USP48-210ENST00000489108 EYSQ5T1H1 3165 aa19.97■□□□□ 0.79
USP48-210ENST00000489108 ANP32CO43423 234 aa19.97■□□□□ 0.79
USP48-210ENST00000489108 ALDH1L2Q3SY69 923 aa19.97■□□□□ 0.79
USP48-210ENST00000489108 EDC3Q96F86 508 aaKnown RBP19.97■□□□□ 0.79
USP48-210ENST00000489108 CDX2Q99626 313 aaPredicted RBP19.97■□□□□ 0.79
USP48-210ENST00000489108 DHX36Q9H2U1 1008 aaKnown RBP19.97■□□□□ 0.79
USP48-210ENST00000489108 DNAJC18Q9H819 358 aa19.97■□□□□ 0.79
USP48-210ENST00000489108 FLRT1Q9NZU1 646 aa19.97■□□□□ 0.79
USP48-210ENST00000489108 HDAC5Q9UQL6 1122 aa19.97■□□□□ 0.79
USP48-210ENST00000489108 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
USP48-210ENST00000489108 FRMPD3Q5JV73 1810 aa19.97■□□□□ 0.79
USP48-210ENST00000489108 GDF11O95390 407 aa19.96■□□□□ 0.79
USP48-210ENST00000489108 MAP2K5Q13163 448 aa19.96■□□□□ 0.79
USP48-210ENST00000489108 GORABQ5T7V8 394 aa19.96■□□□□ 0.79
USP48-210ENST00000489108 FOXP4Q8IVH2 680 aaPredicted RBP19.96■□□□□ 0.79
USP48-210ENST00000489108 CWC22Q9HCG8 908 aaKnown RBP19.96■□□□□ 0.79
USP48-210ENST00000489108 EMILIN3Q9NT22 766 aa19.96■□□□□ 0.79
USP48-210ENST00000489108 SMC4Q9NTJ3 1288 aa19.96■□□□□ 0.79
USP48-210ENST00000489108 MFSD14CQ5VZR4 134 aa19.95■□□□□ 0.78
USP48-210ENST00000489108 GTF3C2Q8WUA4 911 aaPredicted RBP19.95■□□□□ 0.78
USP48-210ENST00000489108 TGFBRAP1Q8WUH2 860 aa19.95■□□□□ 0.78
USP48-210ENST00000489108 MEIS3Q99687 375 aa19.95■□□□□ 0.78
USP48-210ENST00000489108 SEMA6BQ9H3T3 888 aa19.95■□□□□ 0.78
USP48-210ENST00000489108 AATFQ9NY61 560 aaKnown RBP eCLIP19.95■□□□□ 0.78
USP48-210ENST00000489108 LRP2BPQ9P2M1 347 aa19.95■□□□□ 0.78
USP48-210ENST00000489108 MAST2Q6P0Q8 1798 aa19.94■□□□□ 0.78
USP48-210ENST00000489108 E9PSI1 815 aa19.94■□□□□ 0.78
USP48-210ENST00000489108 CNGA1P29973 690 aa19.94■□□□□ 0.78
USP48-210ENST00000489108 SHHQ15465 462 aa19.94■□□□□ 0.78
USP48-210ENST00000489108 USP17L2Q6R6M4 530 aa19.94■□□□□ 0.78
USP48-210ENST00000489108 METTL16Q86W50 562 aaKnown RBP19.94■□□□□ 0.78
USP48-210ENST00000489108 MAPKAPK5Q8IW41 473 aa19.94■□□□□ 0.78
USP48-210ENST00000489108 CRACR2BQ8N4Y2 399 aaPredicted RBP19.94■□□□□ 0.78
USP48-210ENST00000489108 MAFAQ8NHW3 353 aaPredicted RBP19.94■□□□□ 0.78
USP48-210ENST00000489108 NOL10Q9BSC4 688 aaKnown RBP19.94■□□□□ 0.78
USP48-210ENST00000489108 PRKAG2Q9UGJ0 569 aa19.94■□□□□ 0.78
USP48-210ENST00000489108 DDX20Q9UHI6 824 aaKnown RBP19.94■□□□□ 0.78
USP48-210ENST00000489108 ZBTB21Q9ULJ3 1066 aa19.94■□□□□ 0.78
USP48-210ENST00000489108 SRGAP3O43295 1099 aa19.93■□□□□ 0.78
USP48-210ENST00000489108 CNMDO75829 334 aa19.93■□□□□ 0.78
USP48-210ENST00000489108 ARID4AP29374 1257 aaPredicted RBP19.93■□□□□ 0.78
USP48-210ENST00000489108 MCAMP43121 646 aa19.93■□□□□ 0.78
USP48-210ENST00000489108 RTP1P59025 263 aa19.93■□□□□ 0.78
USP48-210ENST00000489108 LPAR1Q92633 364 aa19.93■□□□□ 0.78
USP48-210ENST00000489108 TRIM34Q9BYJ4 488 aa19.93■□□□□ 0.78
USP48-210ENST00000489108 GINM1Q9NU53 330 aa19.93■□□□□ 0.78
USP48-210ENST00000489108 PALD1Q9ULE6 856 aa19.93■□□□□ 0.78
USP48-210ENST00000489108 NOB1Q9ULX3 412 aaKnown RBP19.93■□□□□ 0.78
USP48-210ENST00000489108 RABGAP1Q9Y3P9 1069 aa19.93■□□□□ 0.78
USP48-210ENST00000489108 PRUNE2Q8WUY3 3088 aa19.92■□□□□ 0.78
USP48-210ENST00000489108 GLRX3O76003 335 aaKnown RBP19.92■□□□□ 0.78
USP48-210ENST00000489108 BAG3O95817 575 aa19.92■□□□□ 0.78
USP48-210ENST00000489108 PTPREP23469 700 aa19.92■□□□□ 0.78
USP48-210ENST00000489108 ATP2B2Q01814 1243 aa19.92■□□□□ 0.78
USP48-210ENST00000489108 SLFN5Q08AF3 891 aa19.92■□□□□ 0.78
USP48-210ENST00000489108 C9orf50Q5SZB4 431 aa19.92■□□□□ 0.78
USP48-210ENST00000489108 WDR78Q5VTH9 848 aa19.92■□□□□ 0.78
USP48-210ENST00000489108 PRDM6Q9NQX0 595 aa19.92■□□□□ 0.78
USP48-210ENST00000489108 SLC15A5A6NIM6 579 aa19.91■□□□□ 0.78
USP48-210ENST00000489108 DNM1LO00429 736 aa19.91■□□□□ 0.78
USP48-210ENST00000489108 PPP4CP60510 307 aa19.91■□□□□ 0.78
USP48-210ENST00000489108 CCNA1P78396 465 aa19.91■□□□□ 0.78
USP48-210ENST00000489108 NAA16Q6N069 864 aaPredicted RBP19.91■□□□□ 0.78
USP48-210ENST00000489108 NPLOC4Q8TAT6 608 aa19.91■□□□□ 0.78
USP48-210ENST00000489108 MYLIPQ8WY64 445 aa19.91■□□□□ 0.78
USP48-210ENST00000489108 SAP30BPQ9UHR5 308 aaKnown RBP19.91■□□□□ 0.78
USP48-210ENST00000489108 ATP11BQ9Y2G3 1177 aa19.91■□□□□ 0.78
USP48-210ENST00000489108 FLT1P17948 1338 aa19.91■□□□□ 0.78
USP48-210ENST00000489108 LTBP2Q14767 1821 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 CDK5RAP2Q96SN8 1893 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 USP17L15C9J2P7 530 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 USP17L13C9JLJ4 530 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 USP17L11C9JVI0 530 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 USP17L18D6R9N7 530 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 USP17L22D6RA61 530 aa19.9■□□□□ 0.78
USP48-210ENST00000489108 USP17L17D6RBQ6 530 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms