RNA–Protein interactions for RNA: ENST00000489081.5

CMSS1-205, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2 BASIC

Gene CMSS1, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-205ENST00000489081 ASTN2O75129 1339 aaPredicted RBP13.54□□□□□ -0.24
CMSS1-205ENST00000489081 TSPY2A6NKD2 308 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 LIFRP42702 1097 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 HIRAP54198 1017 aaPredicted RBP13.53□□□□□ -0.24
CMSS1-205ENST00000489081 TFAP4Q01664 338 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 SART3Q15020 963 aaKnown RBP13.53□□□□□ -0.24
CMSS1-205ENST00000489081 FAM47AQ5JRC9 791 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 IQCA1Q86XH1 822 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 FOXP4Q8IVH2 680 aaPredicted RBP13.53□□□□□ -0.24
CMSS1-205ENST00000489081 ZNF444Q8N0Y2 327 aaPredicted RBP13.53□□□□□ -0.24
CMSS1-205ENST00000489081 ZKSCAN3Q9BRR0 538 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 UBAC1Q9BSL1 405 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 DNAJC18Q9H819 358 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 LY9Q9HBG7 655 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 ADARB2Q9NS39 739 aaKnown RBP13.53□□□□□ -0.24
CMSS1-205ENST00000489081 HACL1Q9UJ83 578 aa13.53□□□□□ -0.24
CMSS1-205ENST00000489081 MYH1P12882 1939 aa13.52□□□□□ -0.24
CMSS1-205ENST00000489081 ERICH2A1L162 156 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 GLTPD2A6NH11 291 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 SLURP2P0DP57 97 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 SHMT1P34896 483 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 TNNI2P48788 182 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 ST3GAL1Q11201 340 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 TNFAIP1Q13829 316 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 RASA3Q14644 834 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 SEC23AQ15436 765 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 SGMS1Q86VZ5 419 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 CRACR2BQ8N4Y2 399 aaPredicted RBP13.52□□□□□ -0.25
CMSS1-205ENST00000489081 ZNF274Q96GC6 653 aaPredicted RBP13.52□□□□□ -0.25
CMSS1-205ENST00000489081 CSRNP1Q96S65 589 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 ZSCAN10Q96SZ4 725 aaPredicted RBP13.52□□□□□ -0.25
CMSS1-205ENST00000489081 TMEM39BQ9GZU3 492 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 TCP11L1Q9NUJ3 509 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 PGAP2Q9UHJ9 254 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 BRPF3Q9ULD4 1205 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 TNKSO95271 1327 aa13.52□□□□□ -0.25
CMSS1-205ENST00000489081 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
CMSS1-205ENST00000489081 TSPY3P0CV98 308 aa13.51□□□□□ -0.25
CMSS1-205ENST00000489081 TSPY8P0CW00 308 aa13.51□□□□□ -0.25
CMSS1-205ENST00000489081 PDIA3P30101 505 aaKnown RBP13.51□□□□□ -0.25
CMSS1-205ENST00000489081 WTAPQ15007 396 aa13.51□□□□□ -0.25
CMSS1-205ENST00000489081 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
CMSS1-205ENST00000489081 TMTC2Q8N394 836 aa13.51□□□□□ -0.25
CMSS1-205ENST00000489081 ENAHQ8N8S7 591 aaPredicted RBP13.51□□□□□ -0.25
CMSS1-205ENST00000489081 NECAB1Q8N987 351 aa13.51□□□□□ -0.25
CMSS1-205ENST00000489081 SPRYD3Q8NCJ5 442 aa13.51□□□□□ -0.25
CMSS1-205ENST00000489081 NEDD1Q8NHV4 660 aa13.51□□□□□ -0.25
CMSS1-205ENST00000489081 INTS4Q96HW7 963 aaKnown RBP13.51□□□□□ -0.25
CMSS1-205ENST00000489081 PLIN4Q96Q06 1357 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 FAM196BA6NMK8 535 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 NMT2O60551 498 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 PFKFB2O60825 505 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 HSP90AA1P07900 732 aaKnown RBP13.5□□□□□ -0.25
CMSS1-205ENST00000489081 CCDC178Q5BJE1 867 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 ANGEL2Q5VTE6 544 aaKnown RBP13.5□□□□□ -0.25
CMSS1-205ENST00000489081 TATDN1Q6P1N9 297 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 APOA5Q6Q788 366 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 APOBEC3FQ8IUX4 373 aaKnown RBP13.5□□□□□ -0.25
CMSS1-205ENST00000489081 CDAN1Q8IWY9 1227 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 CCDC17Q96LX7 622 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.5□□□□□ -0.25
CMSS1-205ENST00000489081 SLKQ9H2G2 1235 aaPredicted RBP13.5□□□□□ -0.25
CMSS1-205ENST00000489081 IL17RBQ9NRM6 502 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 GGA3Q9NZ52 723 aa13.5□□□□□ -0.25
CMSS1-205ENST00000489081 HERC5Q9UII4 1024 aaKnown RBP13.5□□□□□ -0.25
CMSS1-205ENST00000489081 PITPNM2Q9BZ72 1349 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 SIPA1L1O43166 1804 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 CCDC69A6NI79 296 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 TBC1D12O60347 775 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 AKR1B1P15121 316 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 STK3Q13188 491 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 IFIT1BQ5T764 474 aaKnown RBP13.49□□□□□ -0.25
CMSS1-205ENST00000489081 RCSD1Q6JBY9 416 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 NFXL1Q6ZNB6 911 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 ANKS1AQ92625 1134 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 GTF3C6Q969F1 213 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 TEPSINQ96N21 525 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 TRIM34Q9BYJ4 488 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 DEFB129Q9H1M3 183 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 NAP1L2Q9ULW6 460 aaPredicted RBP13.49□□□□□ -0.25
CMSS1-205ENST00000489081 SCAF8Q9UPN6 1271 aaKnown RBP13.49□□□□□ -0.25
CMSS1-205ENST00000489081 HPS5Q9UPZ3 1129 aa13.49□□□□□ -0.25
CMSS1-205ENST00000489081 IGKV6D-41A0A0C4DH26 115 aa13.48□□□□□ -0.25
CMSS1-205ENST00000489081 GOLGA8BA8MQT2 603 aa13.48□□□□□ -0.25
CMSS1-205ENST00000489081 EPHX2P34913 555 aa13.48□□□□□ -0.25
CMSS1-205ENST00000489081 NOVP48745 357 aa13.48□□□□□ -0.25
CMSS1-205ENST00000489081 MAP3K10Q02779 954 aa13.48□□□□□ -0.25
CMSS1-205ENST00000489081 SCRN1Q12765 414 aa13.48□□□□□ -0.25
CMSS1-205ENST00000489081 USP50Q70EL3 339 aaPredicted RBP13.48□□□□□ -0.25
CMSS1-205ENST00000489081 DGKHQ86XP1 1220 aa13.48□□□□□ -0.25
CMSS1-205ENST00000489081 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.48□□□□□ -0.25
CMSS1-205ENST00000489081 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.48□□□□□ -0.25
CMSS1-205ENST00000489081 SLC12A7Q9Y666 1083 aa13.48□□□□□ -0.25
CMSS1-205ENST00000489081 UTRNP46939 3433 aa13.48□□□□□ -0.25
CMSS1-205ENST00000489081 POTECB2RU33 542 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 ZBTB43O43298 467 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 DDIT3P35638 169 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 RCAN1P53805 252 aa13.47□□□□□ -0.25
CMSS1-205ENST00000489081 CCT2P78371 535 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms