RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 ATP8A2Q9NTI2 1148 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-232ENST00000489053 BIN2Q9UBW5 565 aaPredicted RBP10.98□□□□□ -0.65
HDAC6-232ENST00000489053 ZBTB21Q9ULJ3 1066 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 PCDHB15Q9Y5E8 787 aa10.98□□□□□ -0.65
HDAC6-232ENST00000489053 C19orf81C9J6K1 198 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 GLRX3O76003 335 aaKnown RBP10.97□□□□□ -0.65
HDAC6-232ENST00000489053 GH2P01242 217 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 APPP05067 770 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 ZFYP08048 801 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-232ENST00000489053 TSHZ3Q63HK5 1081 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 GPAT2Q6NUI2 795 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 C17orf99Q6UX52 265 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 LCORLQ8N3X6 602 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 SDR42E1Q8WUS8 393 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 GCC1Q96CN9 775 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 FSD1Q9BTV5 496 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 WDR18Q9BV38 432 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 SLC4A4Q9Y6R1 1079 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 TTC41PQ6P2S7 1318 aa10.97□□□□□ -0.65
HDAC6-232ENST00000489053 TNPO2O14787 897 aaKnown RBP10.96□□□□□ -0.65
HDAC6-232ENST00000489053 MX1P20591 662 aa10.96□□□□□ -0.65
HDAC6-232ENST00000489053 GCLCP48506 637 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-232ENST00000489053 USP14P54578 494 aa10.96□□□□□ -0.65
HDAC6-232ENST00000489053 BACE1P56817 501 aa10.96□□□□□ -0.65
HDAC6-232ENST00000489053 TREML2Q5T2D2 321 aa10.96□□□□□ -0.65
HDAC6-232ENST00000489053 USP17L2Q6R6M4 530 aa10.96□□□□□ -0.65
HDAC6-232ENST00000489053 KBTBD3Q8NAB2 608 aa10.96□□□□□ -0.65
HDAC6-232ENST00000489053 COA7Q96BR5 231 aa10.96□□□□□ -0.65
HDAC6-232ENST00000489053 DCP1AQ9NPI6 582 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-232ENST00000489053 SWAP70Q9UH65 585 aa10.96□□□□□ -0.65
HDAC6-232ENST00000489053 TAOK2Q9UL54 1235 aa10.96□□□□□ -0.65
HDAC6-232ENST00000489053 MYPNQ86TC9 1320 aa10.95□□□□□ -0.66
HDAC6-232ENST00000489053 TCRBV5S4A2TA0A5A2 114 aa10.95□□□□□ -0.66
HDAC6-232ENST00000489053 RNF113AO15541 343 aaKnown RBP10.95□□□□□ -0.66
HDAC6-232ENST00000489053 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-232ENST00000489053 TDO2P48775 406 aa10.95□□□□□ -0.66
HDAC6-232ENST00000489053 MOGSQ13724 837 aa10.95□□□□□ -0.66
HDAC6-232ENST00000489053 ZYXQ15942 572 aaKnown RBP10.95□□□□□ -0.66
HDAC6-232ENST00000489053 METTL16Q86W50 562 aaKnown RBP10.95□□□□□ -0.66
HDAC6-232ENST00000489053 ANKRD13CQ8N6S4 541 aa10.95□□□□□ -0.66
HDAC6-232ENST00000489053 NACAP1Q9BZK3 213 aa10.95□□□□□ -0.66
HDAC6-232ENST00000489053 ARHGAP39Q9C0H5 1083 aa10.95□□□□□ -0.66
HDAC6-232ENST00000489053 SH2D4AQ9H788 454 aa10.95□□□□□ -0.66
HDAC6-232ENST00000489053 PTCH2Q9Y6C5 1203 aa10.95□□□□□ -0.66
HDAC6-232ENST00000489053 PRKAB2O43741 272 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 GNAT2P19087 354 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 PLCD1P51178 756 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 ATP2B2Q01814 1243 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-232ENST00000489053 RRP1BQ14684 758 aaKnown RBP10.94□□□□□ -0.66
HDAC6-232ENST00000489053 TATDN1Q6P1N9 297 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 GTF3C2Q8WUA4 911 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-232ENST00000489053 APPBP2Q92624 585 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 TRIM47Q96LD4 638 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 ASCC2Q9H1I8 757 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-232ENST00000489053 DNAJC18Q9H819 358 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 ZNF287Q9HBT7 754 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 ARPP21Q9UBL0 812 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-232ENST00000489053 SRRDQ9UH36 339 aa10.94□□□□□ -0.66
HDAC6-232ENST00000489053 DOCK1Q14185 1865 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 RAD21O60216 631 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 SLC3A2P08195 630 aaKnown RBP10.93□□□□□ -0.66
HDAC6-232ENST00000489053 BCRP11274 1271 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 UBXN2AP68543 259 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 FAM110CQ1W6H9 321 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 SH3D19Q5HYK7 790 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 B4GALNT3Q6L9W6 998 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 TMEM179Q6ZVK1 233 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 PUS7LQ9H0K6 701 aaKnown RBP10.93□□□□□ -0.66
HDAC6-232ENST00000489053 MKNK2Q9HBH9 465 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 ARHGEF10LQ9HCE6 1279 aa10.93□□□□□ -0.66
HDAC6-232ENST00000489053 ADGRA2Q96PE1 1338 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 MINDY4BA8MYZ0 360 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L15C9J2P7 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L13C9JLJ4 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L12C9JPN9 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L11C9JVI0 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L21D6R901 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L18D6R9N7 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L22D6RA61 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L17D6RBQ6 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L19D6RCP7 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L20D6RJB6 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 CYP2D6P10635 497 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 SHMT1P34896 483 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 RGS19P49795 217 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 CCNA1P78396 465 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 USP17L24Q0WX57 530 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 SLFNL1Q499Z3 407 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 WDR78Q5VTH9 848 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 SH3TC2Q8TF17 1288 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 ARMC5Q96C12 935 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 DYNLL2Q96FJ2 89 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 CCDC17Q96LX7 622 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 PAGR1Q9BTK6 254 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 HTTP42858 3142 aa10.92□□□□□ -0.66
HDAC6-232ENST00000489053 TRIM6-TRIM34B2RNG4 842 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 GPAA1O43292 621 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 GRK4P32298 578 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms