RNA–Protein interactions for RNA: ENST00000488979.6

SH3YL1-225, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-225ENST00000488979 CCND3P30281 292 aaPredicted RBP12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 PICALMQ13492 652 aa12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 ZNF697Q5TEC3 545 aa12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 SPATA5Q8NB90 893 aa12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 ZNF280CQ8ND82 737 aa12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 MAFAQ8NHW3 353 aaPredicted RBP12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 ZNF384Q8TF68 577 aa12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 NSUN4Q96CB9 384 aaKnown RBP12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 HMG20BQ9P0W2 317 aa12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 HERC5Q9UII4 1024 aaKnown RBP12.17□□□□□ -0.46
SH3YL1-225ENST00000488979 FAM196BA6NMK8 535 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 GNAI2P04899 355 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 UQCRFS1P1P0C7P4 283 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 COL9A1P20849 921 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 HMGCS2P54868 508 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 RRP1BQ14684 758 aaKnown RBP12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 GORABQ5T7V8 394 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 NEUROD6Q96NK8 337 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 LBHD1Q9BQE6 289 aaPredicted RBP12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 SENP6Q9GZR1 1112 aaPredicted RBP12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 RAPGEFL1Q9UHV5 662 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 DOCK1Q14185 1865 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 PLXNB2O15031 1838 aa12.16□□□□□ -0.46
SH3YL1-225ENST00000488979 USP17L5A8MUK1 530 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 CCER2I3L3R5 266 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 XRCC5P13010 732 aaKnown RBP12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 PLCG2P16885 1265 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 CAP2P40123 477 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 G3BP1Q13283 466 aaKnown RBP eCLIP12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 SHHQ15465 462 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 CCL14Q16627 93 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 Q3C1V9 767 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 SH3D19Q5HYK7 790 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 MYLIPQ8WY64 445 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 USP6NLQ92738 828 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 P2RX7Q99572 595 aaKnown RBP12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 NUDT12Q9BQG2 462 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 DHX36Q9H2U1 1008 aaKnown RBP12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 AS3MTQ9HBK9 375 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 TXNRD2Q9NNW7 524 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 GPR108Q9NPR9 543 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 GINM1Q9NU53 330 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 PI4KBQ9UBF8 816 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 MORF4L1Q9UBU8 362 aa12.15□□□□□ -0.46
SH3YL1-225ENST00000488979 BAG3O95817 575 aa12.14□□□□□ -0.47
SH3YL1-225ENST00000488979 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
SH3YL1-225ENST00000488979 PPP4CP60510 307 aa12.14□□□□□ -0.47
SH3YL1-225ENST00000488979 ATF7IPQ6VMQ6 1270 aa12.14□□□□□ -0.47
SH3YL1-225ENST00000488979 METTL16Q86W50 562 aaKnown RBP12.14□□□□□ -0.47
SH3YL1-225ENST00000488979 WDR18Q9BV38 432 aa12.14□□□□□ -0.47
SH3YL1-225ENST00000488979 TTYH1Q9H313 450 aaPredicted RBP12.14□□□□□ -0.47
SH3YL1-225ENST00000488979 RAI14Q9P0K7 980 aa12.14□□□□□ -0.47
SH3YL1-225ENST00000488979 ASNSP08243 561 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 TRIM27P14373 513 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 MCAMP43121 646 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 C9orf50Q5SZB4 431 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 POTEHQ6S545 545 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 TBC1D9Q6ZT07 1266 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 FOXP4Q8IVH2 680 aaPredicted RBP12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 TEX11Q8IYF3 940 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 GPRC5AQ8NFJ5 357 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 SYMPKQ92797 1274 aaKnown RBP12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 ZNF512BQ96KM6 892 aaPredicted RBP12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 NOL10Q9BSC4 688 aaKnown RBP12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
SH3YL1-225ENST00000488979 PNMA6EA0A0J9YXQ4 647 aa12.12□□□□□ -0.47
SH3YL1-225ENST00000488979 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
SH3YL1-225ENST00000488979 HOXA7P31268 230 aaPredicted RBP12.12□□□□□ -0.47
SH3YL1-225ENST00000488979 MORN1Q5T089 497 aa12.12□□□□□ -0.47
SH3YL1-225ENST00000488979 NAA16Q6N069 864 aaPredicted RBP12.12□□□□□ -0.47
SH3YL1-225ENST00000488979 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
SH3YL1-225ENST00000488979 TRMT44Q8IYL2 757 aaKnown RBP12.12□□□□□ -0.47
SH3YL1-225ENST00000488979 PORCNQ9H237 461 aa12.12□□□□□ -0.47
SH3YL1-225ENST00000488979 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.12□□□□□ -0.47
SH3YL1-225ENST00000488979 C19orf81C9J6K1 198 aa12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 BACE1P56817 501 aa12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 HERVK_113P62684 666 aa12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 JAG1P78504 1218 aa12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 CCDC158Q5M9N0 1113 aa12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 TMED8Q6PL24 325 aaPredicted RBP12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 PI16Q6UXB8 463 aa12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 CERS3Q8IU89 383 aa12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 GTF3C2Q8WUA4 911 aaPredicted RBP12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 SOCS4Q8WXH5 440 aa12.11□□□□□ -0.47
SH3YL1-225ENST00000488979 LOC285556D6RIA3 1793 aa12.1□□□□□ -0.47
SH3YL1-225ENST00000488979 MAPK4P31152 587 aa12.1□□□□□ -0.47
SH3YL1-225ENST00000488979 IRX3P78415 501 aaPredicted RBP12.1□□□□□ -0.47
SH3YL1-225ENST00000488979 GPR142Q7Z601 462 aa12.1□□□□□ -0.47
SH3YL1-225ENST00000488979 SSH3Q8TE77 659 aa12.1□□□□□ -0.47
SH3YL1-225ENST00000488979 SH3RF3Q8TEJ3 882 aaPredicted RBP12.1□□□□□ -0.47
SH3YL1-225ENST00000488979 TMOD4Q9NZQ9 345 aa12.1□□□□□ -0.47
SH3YL1-225ENST00000488979 FLRT1Q9NZU1 646 aa12.1□□□□□ -0.47
SH3YL1-225ENST00000488979 TNFRSF10AO00220 468 aa12.09□□□□□ -0.47
SH3YL1-225ENST00000488979 FOSL2P15408 326 aa12.09□□□□□ -0.47
SH3YL1-225ENST00000488979 RGS2P41220 211 aa12.09□□□□□ -0.47
SH3YL1-225ENST00000488979 RTP1P59025 263 aa12.09□□□□□ -0.47
SH3YL1-225ENST00000488979 ERVK-9P63128 1117 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms