RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 TMEM67Q5HYA8 995 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 SOGA3Q5TF21 947 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 JAZF1Q86VZ6 243 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 ZKSCAN3Q9BRR0 538 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 ACBD3Q9H3P7 528 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 CCSER2Q9H7U1 834 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 CCDC87Q9NVE4 849 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 KLHL42Q9P2K6 505 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 PARP2Q9UGN5 583 aa4.78□□□□□ -1.64
PRPF4-203ENST00000488937 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.78□□□□□ -1.64
PRPF4-203ENST00000488937 SYNGAP1Q96PV0 1343 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 hCG_2014768A0A024R1R8 64 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 TRPA1O75762 1119 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 MAOBP27338 520 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 EHHADHQ08426 723 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 EFEMP1Q12805 493 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 POU4F3Q15319 338 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 AOC3Q16853 763 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 TMED8Q6PL24 325 aaPredicted RBP4.77□□□□□ -1.65
PRPF4-203ENST00000488937 KIRREL1Q96J84 757 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 CORO1BQ9BR76 489 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 MENTQ9BUN1 341 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 NRSN2Q9GZP1 204 aa4.77□□□□□ -1.65
PRPF4-203ENST00000488937 A6NHS1 94 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 TPD52L2O43399 206 aaKnown RBP4.76□□□□□ -1.65
PRPF4-203ENST00000488937 PARNO95453 639 aaKnown RBP4.76□□□□□ -1.65
PRPF4-203ENST00000488937 HSD3B2P26439 372 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 ZNF76P36508 570 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 TNNI2P48788 182 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 GNL2Q13823 731 aaKnown RBP4.76□□□□□ -1.65
PRPF4-203ENST00000488937 TICAM2Q86XR7 235 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 FAM161BQ96MY7 647 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 CITED4Q96RK1 184 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 FAM129BQ96TA1 746 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 OSBPL2Q9H1P3 480 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 ZSWIM4Q9H7M6 989 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 SRRDQ9UH36 339 aa4.76□□□□□ -1.65
PRPF4-203ENST00000488937 NOP58Q9Y2X3 529 aaKnown RBP4.76□□□□□ -1.65
PRPF4-203ENST00000488937 SORBS3O60504 671 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 TNFRSF21O75509 655 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 CEACAM5P06731 702 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 LDHBP07195 334 aaKnown RBP4.75□□□□□ -1.65
PRPF4-203ENST00000488937 FAM87AP0C7U9 286 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 XPCQ01831 940 aaPredicted RBP4.75□□□□□ -1.65
PRPF4-203ENST00000488937 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.75□□□□□ -1.65
PRPF4-203ENST00000488937 ASB11Q8WXH4 323 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 DUSP9Q99956 384 aaKnown RBP4.75□□□□□ -1.65
PRPF4-203ENST00000488937 XYLT2Q9H1B5 865 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 CHRDQ9H2X0 955 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 CLEC4MQ9H2X3 399 aaPredicted RBP4.75□□□□□ -1.65
PRPF4-203ENST00000488937 EPB41L4BQ9H329 900 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 MYH16Q9H6N6 1097 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 PRDM16Q9HAZ2 1276 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 PIDD1Q9HB75 910 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 PRDM7Q9NQW5 492 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 RNF19AQ9NV58 838 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.75□□□□□ -1.65
PRPF4-203ENST00000488937 SNX11Q9Y5W9 270 aa4.75□□□□□ -1.65
PRPF4-203ENST00000488937 ENPP3O14638 875 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 NDUFB5O43674 189 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 PHACTR2O75167 634 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 FGRP09769 529 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 DNAJA1P31689 397 aaKnown RBP4.74□□□□□ -1.65
PRPF4-203ENST00000488937 ZXDAP98168 799 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 ARID5AQ03989 594 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 AAMPQ13685 434 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 C8orf34Q49A92 452 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 MCF2L2Q86YR7 1114 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 FAM181AQ8N9Y4 354 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 PMFBP1Q8TBY8 1022 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 SNX29Q8TEQ0 813 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 ALKBH8Q96BT7 664 aaKnown RBP4.74□□□□□ -1.65
PRPF4-203ENST00000488937 SORCS2Q96PQ0 1159 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 MRS2Q9HD23 443 aa4.74□□□□□ -1.65
PRPF4-203ENST00000488937 DCP1AQ9NPI6 582 aaPredicted RBP4.74□□□□□ -1.65
PRPF4-203ENST00000488937 DDX41Q9UJV9 622 aaKnown RBP4.74□□□□□ -1.65
PRPF4-203ENST00000488937 DYNC1LI2O43237 492 aaPredicted RBP4.73□□□□□ -1.65
PRPF4-203ENST00000488937 SRFP11831 508 aa4.73□□□□□ -1.65
PRPF4-203ENST00000488937 PCDH1Q08174 1060 aa4.73□□□□□ -1.65
PRPF4-203ENST00000488937 ZCRB1Q8TBF4 217 aaKnown RBP4.73□□□□□ -1.65
PRPF4-203ENST00000488937 DMRTB1Q96MA1 342 aa4.73□□□□□ -1.65
PRPF4-203ENST00000488937 ATXN3LQ9H3M9 355 aa4.73□□□□□ -1.65
PRPF4-203ENST00000488937 GPR182O15218 404 aa4.72□□□□□ -1.65
PRPF4-203ENST00000488937 TRIM13O60858 407 aa4.72□□□□□ -1.65
PRPF4-203ENST00000488937 AOC2O75106 756 aa4.72□□□□□ -1.65
PRPF4-203ENST00000488937 XRCC5P13010 732 aaKnown RBP4.72□□□□□ -1.65
PRPF4-203ENST00000488937 IBSPP21815 317 aaPredicted RBP4.72□□□□□ -1.65
PRPF4-203ENST00000488937 RACK1P63244 317 aaKnown RBP4.72□□□□□ -1.65
PRPF4-203ENST00000488937 PTPN12Q05209 780 aaKnown RBP4.72□□□□□ -1.65
PRPF4-203ENST00000488937 PDE3BQ13370 1112 aa4.72□□□□□ -1.65
PRPF4-203ENST00000488937 IKZF1Q13422 519 aa4.72□□□□□ -1.65
PRPF4-203ENST00000488937 SERINC3Q13530 473 aa4.72□□□□□ -1.65
PRPF4-203ENST00000488937 EXOC8Q8IYI6 725 aa4.72□□□□□ -1.65
PRPF4-203ENST00000488937 RPUSD2Q8IZ73 545 aaKnown RBP4.72□□□□□ -1.65
PRPF4-203ENST00000488937 KCNN1Q92952 543 aa4.72□□□□□ -1.65
PRPF4-203ENST00000488937 BCCIPQ9P287 314 aaKnown RBP eCLIP4.72□□□□□ -1.65
PRPF4-203ENST00000488937 MAGEC2Q9UBF1 373 aaPredicted RBP4.72□□□□□ -1.65
PRPF4-203ENST00000488937 VTI1BQ9UEU0 232 aa4.72□□□□□ -1.65
PRPF4-203ENST00000488937 FOXD3Q9UJU5 478 aaPredicted RBP4.72□□□□□ -1.65
PRPF4-203ENST00000488937 FAN1Q9Y2M0 1017 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms