RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 CERKLQ49MI3 558 aaPredicted RBP14.56□□□□□ -0.08
TRAIP-209ENST00000488860 METTL16Q86W50 562 aaKnown RBP14.56□□□□□ -0.08
TRAIP-209ENST00000488860 RBM46Q8TBY0 533 aaKnown RBP14.56□□□□□ -0.08
TRAIP-209ENST00000488860 ESR2Q92731 530 aa14.56□□□□□ -0.08
TRAIP-209ENST00000488860 KCNB2Q92953 911 aa14.56□□□□□ -0.08
TRAIP-209ENST00000488860 NEK1Q96PY6 1258 aa14.56□□□□□ -0.08
TRAIP-209ENST00000488860 ANGEL1Q9UNK9 670 aaKnown RBP14.56□□□□□ -0.08
TRAIP-209ENST00000488860 KDM4AO75164 1064 aa14.55□□□□□ -0.08
TRAIP-209ENST00000488860 CPA1P15085 419 aa14.55□□□□□ -0.08
TRAIP-209ENST00000488860 ANAPC15P60006 121 aa14.55□□□□□ -0.08
TRAIP-209ENST00000488860 SHROOM1Q2M3G4 852 aaPredicted RBP14.55□□□□□ -0.08
TRAIP-209ENST00000488860 MOB2Q70IA6 237 aa14.55□□□□□ -0.08
TRAIP-209ENST00000488860 NKX2-3Q8TAU0 364 aa14.55□□□□□ -0.08
TRAIP-209ENST00000488860 ITGBL1O95965 494 aaPredicted RBP14.54□□□□□ -0.08
TRAIP-209ENST00000488860 PSMA5P28066 241 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 INPP5BP32019 993 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 IREB2P48200 963 aaKnown RBP14.54□□□□□ -0.08
TRAIP-209ENST00000488860 TFAP4Q01664 338 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 RRP1BQ14684 758 aaKnown RBP14.54□□□□□ -0.08
TRAIP-209ENST00000488860 ABCB5Q2M3G0 1257 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 TSGA10IPQ3SY00 556 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 TATDN1Q6P1N9 297 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 BLOC1S2Q6QNY1 142 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 CYB5R4Q7L1T6 521 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 CHST3Q7LGC8 479 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 ARMC9Q7Z3E5 817 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 MB21D2Q8IYB1 491 aaPredicted RBP14.54□□□□□ -0.08
TRAIP-209ENST00000488860 ZKSCAN3Q9BRR0 538 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 UPF3BQ9BZI7 483 aaKnown RBP14.54□□□□□ -0.08
TRAIP-209ENST00000488860 TAOK2Q9UL54 1235 aa14.54□□□□□ -0.08
TRAIP-209ENST00000488860 PTPRFP10586 1907 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 PLIN4Q96Q06 1357 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 PHF20L1A8MW92 1017 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 USP2O75604 605 aaPredicted RBP14.53□□□□□ -0.08
TRAIP-209ENST00000488860 GH2P01242 217 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 FGRP09769 529 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 MAP3K10Q02779 954 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 COL9A3Q14050 684 aaPredicted RBP14.53□□□□□ -0.08
TRAIP-209ENST00000488860 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.53□□□□□ -0.08
TRAIP-209ENST00000488860 KLRG1Q96E93 195 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 TCEANC2Q96MN5 208 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 GBA2Q9HCG7 927 aaPredicted RBP14.53□□□□□ -0.08
TRAIP-209ENST00000488860 CABP5Q9NP86 173 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.53□□□□□ -0.08
TRAIP-209ENST00000488860 ZBTB21Q9ULJ3 1066 aa14.53□□□□□ -0.08
TRAIP-209ENST00000488860 PASKQ96RG2 1323 aa14.52□□□□□ -0.08
TRAIP-209ENST00000488860 PRC1O43663 620 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 HMGB1P09429 215 aaKnown RBP14.52□□□□□ -0.09
TRAIP-209ENST00000488860 MCM5P33992 734 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 CAP2P40123 477 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 RAB3GAP1Q15042 981 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 CLEC10AQ8IUN9 316 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 SCYL3Q8IZE3 742 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 C2orf69Q8N8R5 385 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 ZKSCAN4Q969J2 545 aaPredicted RBP14.52□□□□□ -0.09
TRAIP-209ENST00000488860 CCDC17Q96LX7 622 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 LRRC2Q9BYS8 371 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 ZSWIM5Q9P217 1185 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 CSADQ9Y600 493 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 CYP46A1Q9Y6A2 500 aa14.52□□□□□ -0.09
TRAIP-209ENST00000488860 TNKSO95271 1327 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 UBE2Q2LH0YL09 131 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 NMT2O60551 498 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 CTNND1O60716 968 aaKnown RBP14.51□□□□□ -0.09
TRAIP-209ENST00000488860 RPS6KB1P23443 525 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 ANTXR2P58335 489 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 JAG1P78504 1218 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 MAP3K9P80192 1104 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 FGD1P98174 961 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 ATP2B2Q01814 1243 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 FSTL1Q12841 308 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 VGLL4Q14135 290 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 SEPT2Q15019 361 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 TMEM179Q6ZVK1 233 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 CCDC84Q86UT8 332 aaPredicted RBP14.51□□□□□ -0.09
TRAIP-209ENST00000488860 IQCA1Q86XH1 822 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 PICK1Q9NRD5 415 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 ZNF112Q9UJU3 913 aa14.51□□□□□ -0.09
TRAIP-209ENST00000488860 ERICH2A1L162 156 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 IFIT3O14879 490 aaKnown RBP14.5□□□□□ -0.09
TRAIP-209ENST00000488860 ASNSP08243 561 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 ICA1Q05084 483 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 SART3Q15020 963 aaKnown RBP14.5□□□□□ -0.09
TRAIP-209ENST00000488860 CST9Q5W186 159 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 RUFY3Q7L099 469 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 DHX32Q7L7V1 743 aaKnown RBP14.5□□□□□ -0.09
TRAIP-209ENST00000488860 ANKRD13AQ8IZ07 590 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 NEDD1Q8NHV4 660 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 KIF2CQ99661 725 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 TM6SF1Q9BZW5 370 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 ELP3Q9H9T3 547 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 ZSWIM6Q9HCJ5 1215 aa14.5□□□□□ -0.09
TRAIP-209ENST00000488860 GUCY1A2P33402 732 aa14.49□□□□□ -0.09
TRAIP-209ENST00000488860 NT5C2P49902 561 aa14.49□□□□□ -0.09
TRAIP-209ENST00000488860 FKBP1BP68106 108 aa14.49□□□□□ -0.09
TRAIP-209ENST00000488860 WTAPQ15007 396 aa14.49□□□□□ -0.09
TRAIP-209ENST00000488860 RABEP1Q15276 862 aa14.49□□□□□ -0.09
TRAIP-209ENST00000488860 MAP3K11Q16584 847 aa14.49□□□□□ -0.09
TRAIP-209ENST00000488860 TMEM67Q5HYA8 995 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms