RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 FAM237AA0A1B0GTK4 181 aa14.57□□□□□ -0.08
CLIC4-202ENST00000488683 CYP2D6P10635 497 aa14.57□□□□□ -0.08
CLIC4-202ENST00000488683 CCDC152Q4G0S7 254 aa14.57□□□□□ -0.08
CLIC4-202ENST00000488683 MED15Q96RN5 788 aa14.57□□□□□ -0.08
CLIC4-202ENST00000488683 KRT23Q9C075 422 aa14.57□□□□□ -0.08
CLIC4-202ENST00000488683 CSRNP2Q9H175 543 aa14.57□□□□□ -0.08
CLIC4-202ENST00000488683 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.57□□□□□ -0.08
CLIC4-202ENST00000488683 PNPLA7Q6ZV29 1317 aa14.57□□□□□ -0.08
CLIC4-202ENST00000488683 COL1A1P02452 1464 aaPredicted RBP14.57□□□□□ -0.08
CLIC4-202ENST00000488683 CELF1Q92879 486 aaKnown RBP14.57□□□□□ -0.08
CLIC4-202ENST00000488683 CNNM2Q9H8M5 875 aa14.57□□□□□ -0.08
CLIC4-202ENST00000488683 SAMSN1Q9NSI8 373 aaKnown RBP14.57□□□□□ -0.08
CLIC4-202ENST00000488683 CICQ96RK0 1608 aaPredicted RBP14.56□□□□□ -0.08
CLIC4-202ENST00000488683 A0A0U1RQJ8 604 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 DDB1Q16531 1140 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 CRACR2BQ8N4Y2 399 aaPredicted RBP14.56□□□□□ -0.08
CLIC4-202ENST00000488683 JMYQ8N9B5 988 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 FANCBQ8NB91 859 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 ATRIPQ8WXE1 791 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 DHX58Q96C10 678 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 ST7Q9NRC1 585 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 V9GY48 417 aaPredicted RBP14.56□□□□□ -0.08
CLIC4-202ENST00000488683 NID2Q14112 1375 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 HOMER1Q86YM7 354 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 KRI1Q8N9T8 703 aaKnown RBP14.56□□□□□ -0.08
CLIC4-202ENST00000488683 UBAC1Q9BSL1 405 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 FBXO2Q9UK22 296 aaPredicted RBP14.56□□□□□ -0.08
CLIC4-202ENST00000488683 MAN1B1Q9UKM7 699 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 ROBO1Q9Y6N7 1651 aa14.56□□□□□ -0.08
CLIC4-202ENST00000488683 A0A1B0GUL6 1792 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 LAMB2P55268 1798 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 CUTAO60888 179 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 CDC25AP30304 524 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 GSDMDP57764 484 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 ZNF174Q15697 407 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 ERCC6LQ2NKX8 1250 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 IMPACTQ9P2X3 320 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 PAXBP1Q9Y5B6 917 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 CASZ1Q86V15 1759 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 ERICH2A1L162 156 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 IKBKBO14920 756 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 MYL5Q02045 173 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 KMT5BQ4FZB7 885 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 CREBRFQ8IUR6 639 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 ENAHQ8N8S7 591 aaPredicted RBP14.55□□□□□ -0.08
CLIC4-202ENST00000488683 DESI2Q9BSY9 194 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 NACAP1Q9BZK3 213 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 DNAI1Q9UI46 699 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 RREB1Q92766 1687 aa14.55□□□□□ -0.08
CLIC4-202ENST00000488683 CACNA1SQ13698 1873 aa14.54□□□□□ -0.08
CLIC4-202ENST00000488683 MAGEB6P1A0A0J9YX57 407 aa14.54□□□□□ -0.08
CLIC4-202ENST00000488683 CPLX3Q8WVH0 158 aa14.54□□□□□ -0.08
CLIC4-202ENST00000488683 GPR101Q96P66 508 aaPredicted RBP14.54□□□□□ -0.08
CLIC4-202ENST00000488683 AATFQ9NY61 560 aaKnown RBP eCLIP14.54□□□□□ -0.08
CLIC4-202ENST00000488683 SRP68Q9UHB9 627 aaKnown RBP14.54□□□□□ -0.08
CLIC4-202ENST00000488683 MYH13Q9UKX3 1938 aa14.54□□□□□ -0.08
CLIC4-202ENST00000488683 ZSCAN20P17040 1043 aaPredicted RBP14.54□□□□□ -0.08
CLIC4-202ENST00000488683 MDM2Q00987 491 aaPredicted RBP14.54□□□□□ -0.08
CLIC4-202ENST00000488683 PARP10Q53GL7 1025 aa14.54□□□□□ -0.08
CLIC4-202ENST00000488683 GNAT2P19087 354 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 MTF1Q14872 753 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 POSTNQ15063 836 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 FBXO38Q6PIJ6 1188 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 RASGRP2Q7LDG7 609 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 TXNRD3Q86VQ6 643 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 TRIM22Q8IYM9 498 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 NFE2L3Q9Y4A8 694 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 RTL9Q8NET4 1388 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 SPATA31A1Q5TZJ5 1347 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 USP17L12C9JPN9 530 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 USP17L21D6R901 530 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 CDK11BP21127 795 aaKnown RBP14.53□□□□□ -0.08
CLIC4-202ENST00000488683 GTF2E1P29083 439 aaPredicted RBP14.53□□□□□ -0.08
CLIC4-202ENST00000488683 SAFBQ15424 915 aaKnown RBP eCLIP14.53□□□□□ -0.08
CLIC4-202ENST00000488683 SEC23AQ15436 765 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 OLFM4Q6UX06 510 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 BLZF1Q9H2G9 400 aa14.53□□□□□ -0.08
CLIC4-202ENST00000488683 PRDX5P30044 214 aa14.52□□□□□ -0.08
CLIC4-202ENST00000488683 SART3Q15020 963 aaKnown RBP14.52□□□□□ -0.08
CLIC4-202ENST00000488683 PKN1Q16512 942 aa14.52□□□□□ -0.08
CLIC4-202ENST00000488683 AMIGO3Q86WK7 504 aa14.52□□□□□ -0.08
CLIC4-202ENST00000488683 RIOK1Q9BRS2 568 aaKnown RBP14.52□□□□□ -0.08
CLIC4-202ENST00000488683 IRX2Q9BZI1 471 aaPredicted RBP14.52□□□□□ -0.08
CLIC4-202ENST00000488683 PRDM4Q9UKN5 801 aa14.52□□□□□ -0.08
CLIC4-202ENST00000488683 UTRNP46939 3433 aa14.52□□□□□ -0.08
CLIC4-202ENST00000488683 ZNF804BA4D1E1 1349 aa14.52□□□□□ -0.09
CLIC4-202ENST00000488683 COL22A1Q8NFW1 1626 aaPredicted RBP14.52□□□□□ -0.09
CLIC4-202ENST00000488683 TEX33O43247 280 aa14.52□□□□□ -0.09
CLIC4-202ENST00000488683 CD44P16070 742 aaKnown RBP14.52□□□□□ -0.09
CLIC4-202ENST00000488683 TPM4P67936 248 aa14.52□□□□□ -0.09
CLIC4-202ENST00000488683 TOGARAM2Q6ZUX3 1019 aa14.52□□□□□ -0.09
CLIC4-202ENST00000488683 KIF18AQ8NI77 898 aa14.52□□□□□ -0.09
CLIC4-202ENST00000488683 KCND1Q9NSA2 647 aa14.52□□□□□ -0.09
CLIC4-202ENST00000488683 MAPK8IP1Q9UQF2 711 aa14.52□□□□□ -0.09
CLIC4-202ENST00000488683 DEXIO95424 95 aa14.51□□□□□ -0.09
CLIC4-202ENST00000488683 TOP1P11387 765 aaKnown RBP14.51□□□□□ -0.09
CLIC4-202ENST00000488683 PTPREP23469 700 aa14.51□□□□□ -0.09
CLIC4-202ENST00000488683 LINC00116Q8NCU8 138 aa14.51□□□□□ -0.09
CLIC4-202ENST00000488683 CCDC150Q8NCX0 1101 aa14.51□□□□□ -0.09
CLIC4-202ENST00000488683 WASF1Q92558 559 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms