RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 CELA3AP09093 270 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 AFMP43652 599 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 MAPK8P45983 427 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 LRRC14Q15048 493 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 NKG7Q16617 165 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 PRR23BQ6ZRT6 265 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 KCT2Q8NC54 265 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 RGS22Q8NE09 1264 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 ELMO3Q96BJ8 720 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 SRCIN1Q9C0H9 1055 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 WWC3Q9ULE0 1092 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 PPM1HQ9ULR3 514 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 CYP8B1Q9UNU6 501 aa5.67□□□□□ -1.5
CD46-215ENST00000488596 GLI1P08151 1106 aa5.66□□□□□ -1.5
CD46-215ENST00000488596 CFPP27918 469 aa5.66□□□□□ -1.5
CD46-215ENST00000488596 CDKAL1Q5VV42 579 aa5.66□□□□□ -1.5
CD46-215ENST00000488596 PCNX4Q63HM2 1172 aa5.66□□□□□ -1.5
CD46-215ENST00000488596 SCARA3Q6AZY7 606 aa5.66□□□□□ -1.5
CD46-215ENST00000488596 DNAJC14Q6Y2X3 702 aaPredicted RBP5.66□□□□□ -1.5
CD46-215ENST00000488596 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.66□□□□□ -1.5
CD46-215ENST00000488596 CYFIP1Q7L576 1253 aa5.66□□□□□ -1.5
CD46-215ENST00000488596 PLPPR2Q96GM1 343 aa5.66□□□□□ -1.5
CD46-215ENST00000488596 H3BS24 57 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 TSPAN15O95858 294 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 KRT1P04264 644 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 RAP1GAPP47736 663 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 CDK8P49336 464 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 SFRP5Q5T4F7 317 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 C1QL4Q86Z23 238 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 FBF1Q8TES7 1133 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 ANKRD24Q8TF21 1146 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 KIRREL1Q96J84 757 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 PPP1R16BQ96T49 567 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 MIPEPQ99797 713 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 TPX2Q9ULW0 747 aaKnown RBP5.65□□□□□ -1.5
CD46-215ENST00000488596 ST14Q9Y5Y6 855 aa5.65□□□□□ -1.5
CD46-215ENST00000488596 ANKRD33BA6NCL7 494 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 FAM155AB1AL88 458 aaPredicted RBP5.64□□□□□ -1.51
CD46-215ENST00000488596 GDNFP39905 211 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 FGD1P98174 961 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 FMR1Q06787 632 aaKnown RBP eCLIP5.64□□□□□ -1.51
CD46-215ENST00000488596 MPZL3Q6UWV2 235 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 C22orf34Q6ZV56 151 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 SYDE1Q6ZW31 735 aaPredicted RBP5.64□□□□□ -1.51
CD46-215ENST00000488596 NPAS4Q8IUM7 802 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 MFSD4AQ8N468 514 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 GAL3ST3Q96A11 431 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 WNT10AQ9GZT5 417 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 CAPN6Q9Y6Q1 641 aa5.64□□□□□ -1.51
CD46-215ENST00000488596 GIPC1O14908 333 aa5.63□□□□□ -1.51
CD46-215ENST00000488596 BUD31P41223 144 aaPredicted RBP5.63□□□□□ -1.51
CD46-215ENST00000488596 TMEM67Q5HYA8 995 aa5.63□□□□□ -1.51
CD46-215ENST00000488596 LCNL1Q6ZST4 164 aa5.63□□□□□ -1.51
CD46-215ENST00000488596 TTLL10Q6ZVT0 673 aa5.63□□□□□ -1.51
CD46-215ENST00000488596 HDXQ7Z353 690 aa5.63□□□□□ -1.51
CD46-215ENST00000488596 MFSD2AQ8NA29 543 aa5.63□□□□□ -1.51
CD46-215ENST00000488596 ASB16Q96NS5 453 aa5.63□□□□□ -1.51
CD46-215ENST00000488596 C12orf49Q9H741 205 aa5.63□□□□□ -1.51
CD46-215ENST00000488596 CBX7O95931 251 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 USP17L7P0C7H9 530 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 C1QTNF9P0C862 333 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 CAP2P40123 477 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 ETF1P62495 437 aaKnown RBP5.62□□□□□ -1.51
CD46-215ENST00000488596 ALG1LQ6GMV1 187 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 LETMD1Q6P1Q0 360 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 ZSCAN29Q8IWY8 852 aaPredicted RBP5.62□□□□□ -1.51
CD46-215ENST00000488596 LRRC56Q8IYG6 542 aaPredicted RBP5.62□□□□□ -1.51
CD46-215ENST00000488596 XAGE3Q8WTP9 111 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 UBE2FQ969M7 185 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 DIRC2Q96SL1 478 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 KCNK12Q9HB15 430 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 SNCAIPQ9Y6H5 919 aa5.62□□□□□ -1.51
CD46-215ENST00000488596 WIPI1Q5MNZ9 446 aaPredicted RBP5.61□□□□□ -1.51
CD46-215ENST00000488596 PRAMEF13Q5VWM6 474 aa5.61□□□□□ -1.51
CD46-215ENST00000488596 HID1Q8IV36 788 aa5.61□□□□□ -1.51
CD46-215ENST00000488596 ZNF428Q96B54 188 aa5.61□□□□□ -1.51
CD46-215ENST00000488596 ZSWIM5Q9P217 1185 aa5.61□□□□□ -1.51
CD46-215ENST00000488596 FAM8A1Q9UBU6 413 aa5.61□□□□□ -1.51
CD46-215ENST00000488596 SPG7Q9UQ90 795 aa5.61□□□□□ -1.51
CD46-215ENST00000488596 WASH4PA8MWX3 477 aa5.6□□□□□ -1.51
CD46-215ENST00000488596 CST3P01034 146 aaPredicted RBP5.6□□□□□ -1.51
CD46-215ENST00000488596 GRK4P32298 578 aa5.6□□□□□ -1.51
CD46-215ENST00000488596 TAGLNQ01995 201 aaKnown RBP5.6□□□□□ -1.51
CD46-215ENST00000488596 TNK2Q07912 1038 aa5.6□□□□□ -1.51
CD46-215ENST00000488596 TTBK2Q6IQ55 1244 aa5.6□□□□□ -1.51
CD46-215ENST00000488596 SV2BQ7L1I2 683 aa5.6□□□□□ -1.51
CD46-215ENST00000488596 CDH24Q86UP0 819 aa5.6□□□□□ -1.51
CD46-215ENST00000488596 ANKLE2Q86XL3 938 aa5.6□□□□□ -1.51
CD46-215ENST00000488596 ALPK1Q96QP1 1244 aa5.6□□□□□ -1.51
CD46-215ENST00000488596 GFRA2O00451 464 aa5.59□□□□□ -1.51
CD46-215ENST00000488596 ZSCAN22P10073 491 aaPredicted RBP5.59□□□□□ -1.51
CD46-215ENST00000488596 RALGPS1Q5JS13 557 aa5.59□□□□□ -1.51
CD46-215ENST00000488596 THAP5Q7Z6K1 395 aa5.59□□□□□ -1.51
CD46-215ENST00000488596 NSUN3Q9H649 340 aaKnown RBP5.59□□□□□ -1.51
CD46-215ENST00000488596 SLAMF8Q9P0V8 285 aa5.59□□□□□ -1.51
CD46-215ENST00000488596 TTF2Q9UNY4 1162 aaKnown RBP5.59□□□□□ -1.51
CD46-215ENST00000488596 PCDHB5Q9Y5E4 795 aa5.59□□□□□ -1.51
CD46-215ENST00000488596 DNAJC25-GNG10A0A024R161 153 aa5.58□□□□□ -1.52
CD46-215ENST00000488596 ESR1P03372 595 aa5.58□□□□□ -1.52
CD46-215ENST00000488596 ERVFC1P60507 584 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms