RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 USP17L10C9JJH3 530 aa23.35■■□□□ 1.33
GGPS1-206ENST00000488594 MAPK4P31152 587 aa23.35■■□□□ 1.33
GGPS1-206ENST00000488594 HERVK_113P62684 666 aa23.35■■□□□ 1.33
GGPS1-206ENST00000488594 MAP3K21Q5TCX8 1036 aa23.35■■□□□ 1.33
GGPS1-206ENST00000488594 C7orf61Q8IZ16 206 aa23.35■■□□□ 1.33
GGPS1-206ENST00000488594 P2RX7Q99572 595 aaKnown RBP23.35■■□□□ 1.33
GGPS1-206ENST00000488594 C11orf49Q9H6J7 331 aa23.35■■□□□ 1.33
GGPS1-206ENST00000488594 DNAJC18Q9H819 358 aa23.35■■□□□ 1.33
GGPS1-206ENST00000488594 OGDHLQ9ULD0 1010 aa23.35■■□□□ 1.33
GGPS1-206ENST00000488594 CYP2B6P20813 491 aa23.34■■□□□ 1.33
GGPS1-206ENST00000488594 TRIM32Q13049 653 aa23.34■■□□□ 1.33
GGPS1-206ENST00000488594 POLA2Q14181 598 aa23.34■■□□□ 1.33
GGPS1-206ENST00000488594 PDE3AQ14432 1141 aa23.34■■□□□ 1.33
GGPS1-206ENST00000488594 GDF15Q99988 308 aa23.34■■□□□ 1.33
GGPS1-206ENST00000488594 ZBTB21Q9ULJ3 1066 aa23.34■■□□□ 1.33
GGPS1-206ENST00000488594 CYP2E1P05181 493 aaPredicted RBP23.33■■□□□ 1.33
GGPS1-206ENST00000488594 HLA-DOAP06340 250 aa23.33■■□□□ 1.33
GGPS1-206ENST00000488594 PRKAR2AP13861 404 aaKnown RBP23.33■■□□□ 1.33
GGPS1-206ENST00000488594 OS9Q13438 667 aaPredicted RBP23.33■■□□□ 1.33
GGPS1-206ENST00000488594 ADGRA1Q86SQ6 560 aa23.33■■□□□ 1.33
GGPS1-206ENST00000488594 CCAR1Q8IX12 1150 aaKnown RBP23.33■■□□□ 1.33
GGPS1-206ENST00000488594 CLUAP1Q96AJ1 413 aa23.33■■□□□ 1.33
GGPS1-206ENST00000488594 DBNDD2Q9BQY9 259 aa23.33■■□□□ 1.33
GGPS1-206ENST00000488594 TXNRD2Q9NNW7 524 aa23.33■■□□□ 1.33
GGPS1-206ENST00000488594 PALD1Q9ULE6 856 aa23.33■■□□□ 1.33
GGPS1-206ENST00000488594 MAST2Q6P0Q8 1798 aa23.33■■□□□ 1.32
GGPS1-206ENST00000488594 CCER2I3L3R5 266 aa23.32■■□□□ 1.32
GGPS1-206ENST00000488594 SOX1O00570 391 aaPredicted RBP23.32■■□□□ 1.32
GGPS1-206ENST00000488594 MNX1P50219 401 aaPredicted RBP23.32■■□□□ 1.32
GGPS1-206ENST00000488594 JAG1P78504 1218 aa23.32■■□□□ 1.32
GGPS1-206ENST00000488594 CERS3Q8IU89 383 aa23.32■■□□□ 1.32
GGPS1-206ENST00000488594 BCAR3O75815 825 aa23.31■■□□□ 1.32
GGPS1-206ENST00000488594 GDF11O95390 407 aa23.31■■□□□ 1.32
GGPS1-206ENST00000488594 ZKSCAN1P17029 563 aaPredicted RBP23.31■■□□□ 1.32
GGPS1-206ENST00000488594 GPR153Q6NV75 609 aa23.31■■□□□ 1.32
GGPS1-206ENST00000488594 SSH3Q8TE77 659 aa23.31■■□□□ 1.32
GGPS1-206ENST00000488594 RBPJLQ9UBG7 517 aa23.31■■□□□ 1.32
GGPS1-206ENST00000488594 ERVK-9P63128 1117 aa23.3■■□□□ 1.32
GGPS1-206ENST00000488594 ERVK-24P63145 666 aa23.3■■□□□ 1.32
GGPS1-206ENST00000488594 USP17L2Q6R6M4 530 aa23.3■■□□□ 1.32
GGPS1-206ENST00000488594 LRCH3Q96II8 777 aa23.3■■□□□ 1.32
GGPS1-206ENST00000488594 ZMYND8Q9ULU4 1186 aaPredicted RBP23.3■■□□□ 1.32
GGPS1-206ENST00000488594 TNNQ9UQP3 1299 aa23.3■■□□□ 1.32
GGPS1-206ENST00000488594 SIPA1L1O43166 1804 aa23.3■■□□□ 1.32
GGPS1-206ENST00000488594 SURF6O75683 361 aaKnown RBP23.29■■□□□ 1.32
GGPS1-206ENST00000488594 RGS2P41220 211 aa23.29■■□□□ 1.32
GGPS1-206ENST00000488594 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
GGPS1-206ENST00000488594 ZKSCAN2Q63HK3 967 aa23.29■■□□□ 1.32
GGPS1-206ENST00000488594 EMILIN3Q9NT22 766 aa23.29■■□□□ 1.32
GGPS1-206ENST00000488594 SAP30BPQ9UHR5 308 aaKnown RBP23.29■■□□□ 1.32
GGPS1-206ENST00000488594 ZAP70P43403 619 aa23.28■■□□□ 1.32
GGPS1-206ENST00000488594 GPR142Q7Z601 462 aa23.28■■□□□ 1.32
GGPS1-206ENST00000488594 TMEM57Q8N5G2 664 aa23.28■■□□□ 1.32
GGPS1-206ENST00000488594 SLC17A8Q8NDX2 589 aa23.28■■□□□ 1.32
GGPS1-206ENST00000488594 USP6NLQ92738 828 aa23.28■■□□□ 1.32
GGPS1-206ENST00000488594 ALPK3Q96L96 1907 aa23.28■■□□□ 1.32
GGPS1-206ENST00000488594 PLXNB2O15031 1838 aa23.28■■□□□ 1.32
GGPS1-206ENST00000488594 PEX10O60683 326 aa23.27■■□□□ 1.32
GGPS1-206ENST00000488594 CYP7A1P22680 504 aa23.27■■□□□ 1.32
GGPS1-206ENST00000488594 SHROOM1Q2M3G4 852 aaPredicted RBP23.27■■□□□ 1.32
GGPS1-206ENST00000488594 MORN1Q5T089 497 aa23.27■■□□□ 1.32
GGPS1-206ENST00000488594 TMED8Q6PL24 325 aaPredicted RBP23.27■■□□□ 1.32
GGPS1-206ENST00000488594 PLEKHH3Q7Z736 793 aa23.27■■□□□ 1.32
GGPS1-206ENST00000488594 APBA2Q99767 749 aa23.27■■□□□ 1.32
GGPS1-206ENST00000488594 PIH1D3Q9NQM4 214 aaKnown RBP23.27■■□□□ 1.32
GGPS1-206ENST00000488594 LAMA3Q16787 3333 aa23.27■■□□□ 1.32
GGPS1-206ENST00000488594 GH2P01242 217 aa23.27■■□□□ 1.31
GGPS1-206ENST00000488594 CACNB2Q08289 660 aaPredicted RBP23.27■■□□□ 1.31
GGPS1-206ENST00000488594 Q3C1V9 767 aa23.27■■□□□ 1.31
GGPS1-206ENST00000488594 C12orf42Q96LP6 360 aa23.27■■□□□ 1.31
GGPS1-206ENST00000488594 FEZ1Q99689 392 aa23.27■■□□□ 1.31
GGPS1-206ENST00000488594 PAGR1Q9BTK6 254 aa23.27■■□□□ 1.31
GGPS1-206ENST00000488594 PORCNQ9H237 461 aa23.27■■□□□ 1.31
GGPS1-206ENST00000488594 DBNLQ9UJU6 430 aaKnown RBP23.27■■□□□ 1.31
GGPS1-206ENST00000488594 NOP58Q9Y2X3 529 aaKnown RBP23.27■■□□□ 1.31
GGPS1-206ENST00000488594 DDX60LQ5H9U9 1706 aaKnown RBP23.26■■□□□ 1.31
GGPS1-206ENST00000488594 GLRX3O76003 335 aaKnown RBP23.26■■□□□ 1.31
GGPS1-206ENST00000488594 CCNA1P78396 465 aa23.26■■□□□ 1.31
GGPS1-206ENST00000488594 LRIT3Q3SXY7 679 aa23.26■■□□□ 1.31
GGPS1-206ENST00000488594 TATDN1Q6P1N9 297 aa23.26■■□□□ 1.31
GGPS1-206ENST00000488594 EHD4Q9H223 541 aa23.26■■□□□ 1.31
GGPS1-206ENST00000488594 CWC22Q9HCG8 908 aaKnown RBP23.26■■□□□ 1.31
GGPS1-206ENST00000488594 RABGAP1Q9Y3P9 1069 aa23.26■■□□□ 1.31
GGPS1-206ENST00000488594 PFASO15067 1338 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 FOCADQ5VW36 1801 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP17L15C9J2P7 530 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP17L13C9JLJ4 530 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP17L11C9JVI0 530 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP17L18D6R9N7 530 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP17L22D6RA61 530 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP17L17D6RBQ6 530 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP17L19D6RCP7 530 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP17L20D6RJB6 530 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 IDH1O75874 414 aaKnown RBP23.25■■□□□ 1.31
GGPS1-206ENST00000488594 COL6A1P12109 1028 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 SYN1P17600 705 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 MAGEA10P43363 369 aaPredicted RBP23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP5P45974 858 aa23.25■■□□□ 1.31
GGPS1-206ENST00000488594 DYNLL1P63167 89 aaKnown RBP23.25■■□□□ 1.31
GGPS1-206ENST00000488594 USP17L24Q0WX57 530 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms