RNA–Protein interactions for RNA: ENST00000487721.1

SFXN3-206, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-206ENST00000487721 PDE4DIPQ5VU43 2346 aa14.64□□□□□ -0.07
SFXN3-206ENST00000487721 PRKAB2O43741 272 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 APPP05067 770 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 SLURP2P0DP57 97 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 CAP1Q01518 475 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 SLFNL1Q499Z3 407 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 CERKLQ49MI3 558 aaPredicted RBP14.63□□□□□ -0.07
SFXN3-206ENST00000487721 GIMAP6Q6P9H5 292 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 PPP4R3CPQ6ZMV5 832 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 ZNF280CQ8ND82 737 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 OSBP2Q969R2 916 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 CCDC136Q96JN2 1154 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 STRBPQ96SI9 672 aaKnown RBP14.63□□□□□ -0.07
SFXN3-206ENST00000487721 NACAP1Q9BZK3 213 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 OSBPL3Q9H4L5 887 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 SWAP70Q9UH65 585 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 AFG3L2Q9Y4W6 797 aa14.63□□□□□ -0.07
SFXN3-206ENST00000487721 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
SFXN3-206ENST00000487721 GPAA1O43292 621 aa14.62□□□□□ -0.07
SFXN3-206ENST00000487721 PLCD1P51178 756 aa14.62□□□□□ -0.07
SFXN3-206ENST00000487721 ARHGEF6Q15052 776 aa14.62□□□□□ -0.07
SFXN3-206ENST00000487721 TAF1CQ15572 869 aaPredicted RBP14.62□□□□□ -0.07
SFXN3-206ENST00000487721 ANKRD23Q86SG2 305 aa14.62□□□□□ -0.07
SFXN3-206ENST00000487721 PLEKHM2Q8IWE5 1019 aa14.62□□□□□ -0.07
SFXN3-206ENST00000487721 RILPL2Q969X0 211 aa14.62□□□□□ -0.07
SFXN3-206ENST00000487721 ARMC5Q96C12 935 aa14.62□□□□□ -0.07
SFXN3-206ENST00000487721 A0A0G2JLL6 359 aaPredicted RBP14.61□□□□□ -0.07
SFXN3-206ENST00000487721 BTBD19C9JJ37 291 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 USP17L12C9JPN9 530 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 USP17L21D6R901 530 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 CHGBP05060 677 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 SPP2Q13103 211 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 ZMYM1Q5SVZ6 1142 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 TATDN1Q6P1N9 297 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 GADL1Q6ZQY3 521 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 PRRT2Q7Z6L0 340 aaPredicted RBP14.61□□□□□ -0.07
SFXN3-206ENST00000487721 FAM43AQ8N2R8 423 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 DNAJC18Q9H819 358 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 PPP4R2Q9NY27 417 aa14.61□□□□□ -0.07
SFXN3-206ENST00000487721 ARPP21Q9UBL0 812 aaPredicted RBP14.61□□□□□ -0.07
SFXN3-206ENST00000487721 PATL2C9JE40 543 aaKnown RBP14.6□□□□□ -0.07
SFXN3-206ENST00000487721 GDF11O95390 407 aa14.6□□□□□ -0.07
SFXN3-206ENST00000487721 EN2P19622 333 aaPredicted RBP14.6□□□□□ -0.07
SFXN3-206ENST00000487721 TDO2P48775 406 aa14.6□□□□□ -0.07
SFXN3-206ENST00000487721 PABPC4Q13310 644 aaKnown RBP eCLIP14.6□□□□□ -0.07
SFXN3-206ENST00000487721 ABCB5Q2M3G0 1257 aa14.6□□□□□ -0.07
SFXN3-206ENST00000487721 NBPF11Q86T75 865 aa14.6□□□□□ -0.07
SFXN3-206ENST00000487721 WDR18Q9BV38 432 aa14.6□□□□□ -0.07
SFXN3-206ENST00000487721 TMEM106CQ9BVX2 250 aa14.6□□□□□ -0.07
SFXN3-206ENST00000487721 ZNF287Q9HBT7 754 aa14.6□□□□□ -0.07
SFXN3-206ENST00000487721 HELLSQ9NRZ9 838 aa14.6□□□□□ -0.07
SFXN3-206ENST00000487721 ZBTB21Q9ULJ3 1066 aa14.6□□□□□ -0.07
SFXN3-206ENST00000487721 M0R2C6 588 aa14.59□□□□□ -0.07
SFXN3-206ENST00000487721 HIP1O00291 1037 aa14.59□□□□□ -0.07
SFXN3-206ENST00000487721 PDHXO00330 501 aa14.59□□□□□ -0.07
SFXN3-206ENST00000487721 MPHOSPH10O00566 681 aaKnown RBP14.59□□□□□ -0.07
SFXN3-206ENST00000487721 GH2P01242 217 aa14.59□□□□□ -0.07
SFXN3-206ENST00000487721 MFAP1P55081 439 aaKnown RBP14.59□□□□□ -0.07
SFXN3-206ENST00000487721 RRP1BQ14684 758 aaKnown RBP14.59□□□□□ -0.07
SFXN3-206ENST00000487721 RAB3GAP1Q15042 981 aa14.59□□□□□ -0.07
SFXN3-206ENST00000487721 C12orf60Q5U649 245 aa14.59□□□□□ -0.07
SFXN3-206ENST00000487721 PROCA1Q8NCQ7 364 aaPredicted RBP14.59□□□□□ -0.07
SFXN3-206ENST00000487721 PARK7Q99497 189 aaKnown RBP14.59□□□□□ -0.07
SFXN3-206ENST00000487721 TMOD4Q9NZQ9 345 aa14.59□□□□□ -0.07
SFXN3-206ENST00000487721 CDK5RAP2Q96SN8 1893 aa14.59□□□□□ -0.07
SFXN3-206ENST00000487721 GSG1L2A8MUP6 293 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 MINDY4BA8MYZ0 360 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 C19orf81C9J6K1 198 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 USP17L10C9JJH3 530 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 TLR2O60603 784 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 SLC3A2P08195 630 aaKnown RBP14.58□□□□□ -0.08
SFXN3-206ENST00000487721 CYP2D6P10635 497 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 SHMT1P34896 483 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 GABPAQ06546 454 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 SBK1Q52WX2 424 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 CTR9Q6PD62 1173 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 CENPQQ7L2Z9 268 aaPredicted RBP14.58□□□□□ -0.08
SFXN3-206ENST00000487721 CCDC84Q86UT8 332 aaPredicted RBP14.58□□□□□ -0.08
SFXN3-206ENST00000487721 ZNF333Q96JL9 665 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 CCDC17Q96LX7 622 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 PNMA3Q9UL41 463 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 SLC45A1Q9Y2W3 748 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 PTCH2Q9Y6C5 1203 aa14.58□□□□□ -0.08
SFXN3-206ENST00000487721 USP14P54578 494 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 BACE1P56817 501 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 KIF22Q14807 665 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 SLC9C1Q4G0N8 1177 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 MCMDC2Q4G0Z9 681 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 IFNL3Q8IZI9 196 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 SEC62Q99442 399 aaKnown RBP14.57□□□□□ -0.08
SFXN3-206ENST00000487721 FEZ1Q99689 392 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 NAPBQ9H115 298 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 MKNK2Q9HBH9 465 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.57□□□□□ -0.08
SFXN3-206ENST00000487721 AGTPBP1Q9UPW5 1226 aa14.57□□□□□ -0.08
SFXN3-206ENST00000487721 OSBPP22059 807 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 CDK8P49336 464 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 HMGCS2P54868 508 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 MTMR2Q13614 643 aa14.56□□□□□ -0.08
SFXN3-206ENST00000487721 MOGSQ13724 837 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms