RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 TLR7Q9NYK1 1049 aaKnown RBP17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 RIPOR2Q9Y4F9 1068 aa17.11■□□□□ 0.33
HLA-DQB1-209ENST00000487676 KRT2P35908 639 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TSGA10IPQ3SY00 556 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 REXO1L1PQ8IX06 675 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SUFUQ9UMX1 484 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ABCA6Q8N139 1617 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 DEXIO95424 95 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SOGA3Q5TF21 947 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 KCTD16Q68DU8 428 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 NOSTRINQ8IVI9 506 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 DPF2Q92785 391 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 TSKSQ9UJT2 592 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 UHRF1BP1LA0JNW5 1464 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ARHGEF40Q8TER5 1519 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CCDC40Q4G0X9 1142 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 PSMB7Q99436 277 aa17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 STMN4Q9H169 189 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ACTR5Q9H9F9 607 aaPredicted RBP17.1■□□□□ 0.33
HLA-DQB1-209ENST00000487676 GGCXP38435 758 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SEPT7Q16181 437 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ALS2CLQ60I27 953 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 IFT74Q96LB3 600 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 HYOU1Q9Y4L1 999 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CFAP65Q6ZU64 1925 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 KIF4AO95239 1232 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 LRRN4CLQ8ND94 238 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 APPBP2Q92624 585 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 NOX5Q96PH1 765 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CEP152O94986 1710 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 RANBP6O60518 1105 aaKnown RBP17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 MFAP3LO75121 409 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 CCDC93Q567U6 631 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ZHX3Q9H4I2 956 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 MAPK8IP1Q9UQF2 711 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 MAGEA1P43355 309 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 GKAP1Q5VSY0 366 aaPredicted RBP17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 COG1Q8WTW3 980 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 NELFBQ8WX92 580 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 LCMT1Q9UIC8 334 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SPHKAPQ2M3C7 1700 aa17.09■□□□□ 0.33
HLA-DQB1-209ENST00000487676 KCNJ18B7U540 433 aa17.08■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SNRPA1P09661 255 aaKnown RBP17.08■□□□□ 0.33
HLA-DQB1-209ENST00000487676 BRD2P25440 801 aaKnown RBP17.08■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ADD1P35611 737 aaKnown RBP17.08■□□□□ 0.33
HLA-DQB1-209ENST00000487676 KCNJ12Q14500 433 aa17.08■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ESCO1Q5FWF5 840 aa17.08■□□□□ 0.33
HLA-DQB1-209ENST00000487676 ENGASEQ8NFI3 743 aa17.08■□□□□ 0.33
HLA-DQB1-209ENST00000487676 SALL3Q9BXA9 1300 aa17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 B4E1Z4 1266 aa17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 NEFHP12036 1026 aa17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 BEND6Q5SZJ8 279 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 KDRP35968 1356 aa17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 PPP1R7Q15435 360 aa17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 FERMT2Q96AC1 680 aa17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 NOC4LQ9BVI4 516 aaKnown RBP17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 H3BQF6 201 aa17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 ERCC3P19447 782 aa17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 PRPF4BQ13523 1007 aaKnown RBP17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 E2F5Q15329 346 aa17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 IFIH1Q9BYX4 1025 aaKnown RBP17.08■□□□□ 0.32
HLA-DQB1-209ENST00000487676 TLDC2A0PJX2 215 aa17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 COPB1P53618 953 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 HINFPQ9BQA5 517 aa17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 IRX2Q9BZI1 471 aaPredicted RBP17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 HOXC9P31274 260 aa17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 USP14P54578 494 aa17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 MORC3Q14149 939 aa17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 SASH3O75995 380 aa17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 GCKRQ14397 625 aa17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 CALML4Q96GE6 196 aa17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 USP42Q9H9J4 1324 aaKnown RBP17.07■□□□□ 0.32
HLA-DQB1-209ENST00000487676 VIMP08670 466 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 LRRC31Q6UY01 552 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 METTL22Q9BUU2 404 aaPredicted RBP17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 TRIM6Q9C030 488 aaPredicted RBP17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 DBNLQ9UJU6 430 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 ADGRL3Q9HAR2 1447 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 ZMYM6O95789 1325 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 FRMD3A2A2Y4 597 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 ASIC1P78348 528 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 ATP11AP98196 1134 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 NNTQ13423 1086 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 ZNF174Q15697 407 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 FBXW10Q5XX13 1052 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 CSGALNACT2Q8N6G5 542 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 GSDMAQ96QA5 445 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 SEPT11Q9NVA2 429 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 SETBP1Q9Y6X0 1596 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 N4BP1O75113 896 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 GUCY2FP51841 1108 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 PDCLQ13371 301 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 SF3B2Q13435 895 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 ZKSCAN8Q15776 578 aaPredicted RBP17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 CCDC43Q96MW1 224 aaKnown RBP17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 L1RE1Q9UN81 338 aa17.06■□□□□ 0.32
HLA-DQB1-209ENST00000487676 GPAA1O43292 621 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms