RNA–Protein interactions for RNA: ENST00000487670.1

TOM1-214, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-214ENST00000487670 RTP1P59025 263 aa20.27■□□□□ 0.84
TOM1-214ENST00000487670 TIMM10P62072 90 aa20.27■□□□□ 0.84
TOM1-214ENST00000487670 ERVK-9P63128 1117 aa20.27■□□□□ 0.84
TOM1-214ENST00000487670 ERVK-24P63145 666 aa20.27■□□□□ 0.84
TOM1-214ENST00000487670 LBHD1Q9BQE6 289 aaPredicted RBP20.27■□□□□ 0.84
TOM1-214ENST00000487670 CEP126Q9P2H0 1117 aa20.27■□□□□ 0.84
TOM1-214ENST00000487670 CNMDO75829 334 aa20.26■□□□□ 0.83
TOM1-214ENST00000487670 COL9A1P20849 921 aa20.26■□□□□ 0.83
TOM1-214ENST00000487670 TRPV1Q8NER1 839 aa20.26■□□□□ 0.83
TOM1-214ENST00000487670 GPRC5AQ8NFJ5 357 aa20.26■□□□□ 0.83
TOM1-214ENST00000487670 APBA2Q99767 749 aa20.26■□□□□ 0.83
TOM1-214ENST00000487670 CHD9Q3L8U1 2897 aa20.25■□□□□ 0.83
TOM1-214ENST00000487670 PARP14Q460N5 1801 aa20.25■□□□□ 0.83
TOM1-214ENST00000487670 TCF20Q9UGU0 1960 aaKnown RBP20.25■□□□□ 0.83
TOM1-214ENST00000487670 CIAO1O76071 339 aa20.25■□□□□ 0.83
TOM1-214ENST00000487670 GDF11O95390 407 aa20.25■□□□□ 0.83
TOM1-214ENST00000487670 HOXA7P31268 230 aaPredicted RBP20.25■□□□□ 0.83
TOM1-214ENST00000487670 RGS2P41220 211 aa20.25■□□□□ 0.83
TOM1-214ENST00000487670 BACE1P56817 501 aa20.25■□□□□ 0.83
TOM1-214ENST00000487670 TBC1D9Q6ZT07 1266 aa20.25■□□□□ 0.83
TOM1-214ENST00000487670 ZGPATQ8N5A5 531 aaKnown RBP20.25■□□□□ 0.83
TOM1-214ENST00000487670 COL11A1P12107 1806 aaPredicted RBP20.25■□□□□ 0.83
TOM1-214ENST00000487670 ZNF236Q9UL36 1845 aa20.25■□□□□ 0.83
TOM1-214ENST00000487670 A0A0G2JMZ2 1700 aa20.24■□□□□ 0.83
TOM1-214ENST00000487670 PDE3AQ14432 1141 aa20.24■□□□□ 0.83
TOM1-214ENST00000487670 PLEKHH3Q7Z736 793 aa20.24■□□□□ 0.83
TOM1-214ENST00000487670 WDR18Q9BV38 432 aa20.24■□□□□ 0.83
TOM1-214ENST00000487670 ATP11BQ9Y2G3 1177 aa20.24■□□□□ 0.83
TOM1-214ENST00000487670 XIRP2A4UGR9 3374 aa20.23■□□□□ 0.83
TOM1-214ENST00000487670 MAPK4P31152 587 aa20.23■□□□□ 0.83
TOM1-214ENST00000487670 ANO1Q5XXA6 986 aa20.23■□□□□ 0.83
TOM1-214ENST00000487670 SH3RF1Q7Z6J0 888 aa20.23■□□□□ 0.83
TOM1-214ENST00000487670 NPLOC4Q8TAT6 608 aa20.23■□□□□ 0.83
TOM1-214ENST00000487670 SH3RF3Q8TEJ3 882 aaPredicted RBP20.23■□□□□ 0.83
TOM1-214ENST00000487670 BADQ92934 168 aa20.23■□□□□ 0.83
TOM1-214ENST00000487670 NSUN4Q96CB9 384 aaKnown RBP20.23■□□□□ 0.83
TOM1-214ENST00000487670 NPM3O75607 178 aaKnown RBP20.22■□□□□ 0.83
TOM1-214ENST00000487670 FOSL2P15408 326 aa20.22■□□□□ 0.83
TOM1-214ENST00000487670 GJC2Q5T442 439 aaPredicted RBP20.22■□□□□ 0.83
TOM1-214ENST00000487670 ERICH6Q7L0X2 663 aa20.22■□□□□ 0.83
TOM1-214ENST00000487670 SSH1Q8WYL5 1049 aa20.22■□□□□ 0.83
TOM1-214ENST00000487670 TBC1D2Q9BYX2 928 aa20.22■□□□□ 0.83
TOM1-214ENST00000487670 AS3MTQ9HBK9 375 aa20.22■□□□□ 0.83
TOM1-214ENST00000487670 EMILIN3Q9NT22 766 aa20.22■□□□□ 0.83
TOM1-214ENST00000487670 CHD7Q9P2D1 2997 aa20.22■□□□□ 0.83
TOM1-214ENST00000487670 PDS5AQ29RF7 1337 aaKnown RBP20.22■□□□□ 0.83
TOM1-214ENST00000487670 NCOR1O75376 2440 aa20.21■□□□□ 0.83
TOM1-214ENST00000487670 CYP2C19P33261 490 aa20.21■□□□□ 0.83
TOM1-214ENST00000487670 MAP2K5Q13163 448 aa20.21■□□□□ 0.83
TOM1-214ENST00000487670 TEX11Q8IYF3 940 aa20.21■□□□□ 0.83
TOM1-214ENST00000487670 TRMT44Q8IYL2 757 aaKnown RBP20.21■□□□□ 0.83
TOM1-214ENST00000487670 XAGE2Q96GT9 111 aa20.21■□□□□ 0.83
TOM1-214ENST00000487670 MRS2Q9HD23 443 aa20.21■□□□□ 0.83
TOM1-214ENST00000487670 PRDM5Q9NQX1 630 aaPredicted RBP20.21■□□□□ 0.83
TOM1-214ENST00000487670 TMOD4Q9NZQ9 345 aa20.21■□□□□ 0.83
TOM1-214ENST00000487670 HMG20BQ9P0W2 317 aa20.21■□□□□ 0.83
TOM1-214ENST00000487670 DDX20Q9UHI6 824 aaKnown RBP20.21■□□□□ 0.83
TOM1-214ENST00000487670 PTPRCP08575 1304 aa20.21■□□□□ 0.83
TOM1-214ENST00000487670 A0A1B0GUL7 405 aa20.2■□□□□ 0.82
TOM1-214ENST00000487670 ZBTB22O15209 634 aa20.2■□□□□ 0.82
TOM1-214ENST00000487670 CNGA1P29973 690 aa20.2■□□□□ 0.82
TOM1-214ENST00000487670 SLF2Q8IX21 1173 aa20.2■□□□□ 0.82
TOM1-214ENST00000487670 TRIM43BA6NCK2 446 aa20.19■□□□□ 0.82
TOM1-214ENST00000487670 ITGB8P26012 769 aa20.19■□□□□ 0.82
TOM1-214ENST00000487670 IL15P40933 162 aaPredicted RBP20.19■□□□□ 0.82
TOM1-214ENST00000487670 EPHB4P54760 987 aa20.19■□□□□ 0.82
TOM1-214ENST00000487670 ZYXQ15942 572 aaKnown RBP20.19■□□□□ 0.82
TOM1-214ENST00000487670 TRIM60Q495X7 471 aa20.19■□□□□ 0.82
TOM1-214ENST00000487670 TRIM43Q96BQ3 446 aaPredicted RBP20.19■□□□□ 0.82
TOM1-214ENST00000487670 PDLIM7Q9NR12 457 aa20.19■□□□□ 0.82
TOM1-214ENST00000487670 MYH8P13535 1937 aa20.19■□□□□ 0.82
TOM1-214ENST00000487670 USP17L10C9JJH3 530 aa20.18■□□□□ 0.82
TOM1-214ENST00000487670 DNM1LO00429 736 aa20.18■□□□□ 0.82
TOM1-214ENST00000487670 TFCP2Q12800 502 aa20.18■□□□□ 0.82
TOM1-214ENST00000487670 SPTY2D1Q68D10 685 aaPredicted RBP20.18■□□□□ 0.82
TOM1-214ENST00000487670 LPAR1Q92633 364 aa20.18■□□□□ 0.82
TOM1-214ENST00000487670 EDC3Q96F86 508 aaKnown RBP20.18■□□□□ 0.82
TOM1-214ENST00000487670 HERC5Q9UII4 1024 aaKnown RBP20.18■□□□□ 0.82
TOM1-214ENST00000487670 FBXO3Q9UK99 471 aa20.18■□□□□ 0.82
TOM1-214ENST00000487670 ZBTB21Q9ULJ3 1066 aa20.18■□□□□ 0.82
TOM1-214ENST00000487670 IGHA2P01877 340 aa20.17■□□□□ 0.82
TOM1-214ENST00000487670 CYBAP13498 195 aa20.17■□□□□ 0.82
TOM1-214ENST00000487670 WDR78Q5VTH9 848 aa20.17■□□□□ 0.82
TOM1-214ENST00000487670 SLC39A5Q6ZMH5 540 aa20.17■□□□□ 0.82
TOM1-214ENST00000487670 ADGRA1Q86SQ6 560 aa20.17■□□□□ 0.82
TOM1-214ENST00000487670 MAPKAPK5Q8IW41 473 aa20.17■□□□□ 0.82
TOM1-214ENST00000487670 BTBD7Q9P203 1132 aa20.17■□□□□ 0.82
TOM1-214ENST00000487670 NAV1Q8NEY1 1877 aa20.17■□□□□ 0.82
TOM1-214ENST00000487670 BDP1A6H8Y1 2624 aa20.16■□□□□ 0.82
TOM1-214ENST00000487670 ASNSP08243 561 aa20.16■□□□□ 0.82
TOM1-214ENST00000487670 UBTFL1P0CB47 393 aaPredicted RBP20.16■□□□□ 0.82
TOM1-214ENST00000487670 PTPREP23469 700 aa20.16■□□□□ 0.82
TOM1-214ENST00000487670 SMAD3P84022 425 aaKnown RBP20.16■□□□□ 0.82
TOM1-214ENST00000487670 GRIN2CQ14957 1233 aa20.16■□□□□ 0.82
TOM1-214ENST00000487670 CCAR1Q8IX12 1150 aaKnown RBP20.16■□□□□ 0.82
TOM1-214ENST00000487670 AATFQ9NY61 560 aaKnown RBP eCLIP20.16■□□□□ 0.82
TOM1-214ENST00000487670 RAI14Q9P0K7 980 aa20.16■□□□□ 0.82
TOM1-214ENST00000487670 PRKAG2Q9UGJ0 569 aa20.16■□□□□ 0.82
TOM1-214ENST00000487670 ZNF521Q96K83 1311 aa20.16■□□□□ 0.82
TOM1-214ENST00000487670 MCAMP43121 646 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms