RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 DEXIO95424 95 aa23.67■■□□□ 1.38
PHF1-209ENST00000487667 RXRAP19793 462 aa23.67■■□□□ 1.38
PHF1-209ENST00000487667 TGFB2P61812 414 aa23.67■■□□□ 1.38
PHF1-209ENST00000487667 C16orf86Q6ZW13 317 aa23.67■■□□□ 1.38
PHF1-209ENST00000487667 SGIP1Q9BQI5 828 aa23.67■■□□□ 1.38
PHF1-209ENST00000487667 CDK5RAP2Q96SN8 1893 aa23.66■■□□□ 1.38
PHF1-209ENST00000487667 DDX60LQ5H9U9 1706 aaKnown RBP23.66■■□□□ 1.38
PHF1-209ENST00000487667 FOCADQ5VW36 1801 aa23.66■■□□□ 1.38
PHF1-209ENST00000487667 KIF13BQ9NQT8 1826 aa23.66■■□□□ 1.38
PHF1-209ENST00000487667 GOLGA6L4A6NEF3 574 aa23.66■■□□□ 1.38
PHF1-209ENST00000487667 ZSCAN23Q3MJ62 389 aa23.66■■□□□ 1.38
PHF1-209ENST00000487667 NUP133Q8WUM0 1156 aa23.66■■□□□ 1.38
PHF1-209ENST00000487667 MYL10Q9BUA6 226 aa23.66■■□□□ 1.38
PHF1-209ENST00000487667 RNF26Q9BY78 433 aaPredicted RBP23.66■■□□□ 1.38
PHF1-209ENST00000487667 TFAP4Q01664 338 aa23.65■■□□□ 1.38
PHF1-209ENST00000487667 AKAP17AQ02040 695 aaKnown RBP23.65■■□□□ 1.38
PHF1-209ENST00000487667 CCDC144CPQ8IYA2 1237 aa23.65■■□□□ 1.38
PHF1-209ENST00000487667 GADD45BO75293 160 aaPredicted RBP23.65■■□□□ 1.38
PHF1-209ENST00000487667 PTGER2P43116 358 aa23.65■■□□□ 1.38
PHF1-209ENST00000487667 MRE11P49959 708 aa23.65■■□□□ 1.38
PHF1-209ENST00000487667 DACT2Q5SW24 774 aa23.65■■□□□ 1.38
PHF1-209ENST00000487667 CRACR2BQ8N4Y2 399 aaPredicted RBP23.65■■□□□ 1.38
PHF1-209ENST00000487667 CTCFLQ8NI51 663 aaPredicted RBP23.65■■□□□ 1.38
PHF1-209ENST00000487667 LEO1Q8WVC0 666 aaPredicted RBP23.65■■□□□ 1.38
PHF1-209ENST00000487667 ZDHHC15Q96MV8 337 aa23.65■■□□□ 1.38
PHF1-209ENST00000487667 SLC26A6Q9BXS9 759 aa23.65■■□□□ 1.38
PHF1-209ENST00000487667 TSPY3P0CV98 308 aa23.64■■□□□ 1.37
PHF1-209ENST00000487667 TSPY8P0CW00 308 aa23.64■■□□□ 1.37
PHF1-209ENST00000487667 XBP1P17861 261 aa23.64■■□□□ 1.37
PHF1-209ENST00000487667 KCNA3P22001 575 aa23.64■■□□□ 1.37
PHF1-209ENST00000487667 KIF5BP33176 963 aa23.64■■□□□ 1.37
PHF1-209ENST00000487667 TROAPQ12815 778 aa23.64■■□□□ 1.37
PHF1-209ENST00000487667 MYO3BQ8WXR4 1341 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 SMIM22K7EJ46 135 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 PPIP5K2O43314 1243 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 C21orf2O43822 256 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 PHKBQ93100 1093 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 RBM27Q9P2N5 1060 aaKnown RBP23.63■■□□□ 1.37
PHF1-209ENST00000487667 MYH15Q9Y2K3 1946 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 F8W031 263 aaPredicted RBP23.63■■□□□ 1.37
PHF1-209ENST00000487667 SAFBQ15424 915 aaKnown RBP eCLIP23.63■■□□□ 1.37
PHF1-209ENST00000487667 FAM47AQ5JRC9 791 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 KAT14Q9H8E8 782 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 USP40Q9NVE5 1235 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 SAP30BPQ9UHR5 308 aaKnown RBP23.63■■□□□ 1.37
PHF1-209ENST00000487667 SERPINA10Q9UK55 444 aa23.63■■□□□ 1.37
PHF1-209ENST00000487667 MYH1P12882 1939 aa23.62■■□□□ 1.37
PHF1-209ENST00000487667 NPM3O75607 178 aaKnown RBP23.62■■□□□ 1.37
PHF1-209ENST00000487667 CRKP46108 304 aa23.62■■□□□ 1.37
PHF1-209ENST00000487667 PLCD1P51178 756 aa23.62■■□□□ 1.37
PHF1-209ENST00000487667 AOC3Q16853 763 aa23.62■■□□□ 1.37
PHF1-209ENST00000487667 CCDC183Q5T5S1 534 aa23.62■■□□□ 1.37
PHF1-209ENST00000487667 TMEM63CQ9P1W3 806 aa23.62■■□□□ 1.37
PHF1-209ENST00000487667 SWAP70Q9UH65 585 aa23.62■■□□□ 1.37
PHF1-209ENST00000487667 RCOR1Q9UKL0 485 aa23.62■■□□□ 1.37
PHF1-209ENST00000487667 CDK8P49336 464 aa23.61■■□□□ 1.37
PHF1-209ENST00000487667 FOSBP53539 338 aa23.61■■□□□ 1.37
PHF1-209ENST00000487667 GUCY1B3Q02153 619 aa23.61■■□□□ 1.37
PHF1-209ENST00000487667 KRT40Q6A162 431 aa23.61■■□□□ 1.37
PHF1-209ENST00000487667 FAM173BQ6P4H8 233 aa23.61■■□□□ 1.37
PHF1-209ENST00000487667 NBPF11Q86T75 865 aa23.61■■□□□ 1.37
PHF1-209ENST00000487667 DYNLL2Q96FJ2 89 aa23.61■■□□□ 1.37
PHF1-209ENST00000487667 GNAQP50148 359 aa23.61■■□□□ 1.37
PHF1-209ENST00000487667 KIF23Q02241 960 aaPredicted RBP23.61■■□□□ 1.37
PHF1-209ENST00000487667 TFIP11Q9UBB9 837 aaKnown RBP23.61■■□□□ 1.37
PHF1-209ENST00000487667 PRPF3O43395 683 aaKnown RBP23.6■■□□□ 1.37
PHF1-209ENST00000487667 RASA1P20936 1047 aa23.6■■□□□ 1.37
PHF1-209ENST00000487667 GNL2Q13823 731 aaKnown RBP23.6■■□□□ 1.37
PHF1-209ENST00000487667 NEDD1Q8NHV4 660 aa23.6■■□□□ 1.37
PHF1-209ENST00000487667 SPON1Q9HCB6 807 aa23.6■■□□□ 1.37
PHF1-209ENST00000487667 PIM2Q9P1W9 311 aa23.6■■□□□ 1.37
PHF1-209ENST00000487667 PPFIA3O75145 1194 aa23.59■■□□□ 1.37
PHF1-209ENST00000487667 HLA-DOAP06340 250 aa23.59■■□□□ 1.37
PHF1-209ENST00000487667 PPP4R3BQ5MIZ7 849 aa23.59■■□□□ 1.37
PHF1-209ENST00000487667 APOBEC3HQ6NTF7 200 aaKnown RBP23.59■■□□□ 1.37
PHF1-209ENST00000487667 RTEL1Q9NZ71 1219 aa23.59■■□□□ 1.37
PHF1-209ENST00000487667 WDHD1O75717 1129 aaPredicted RBP23.59■■□□□ 1.37
PHF1-209ENST00000487667 SCNN1DP51172 638 aa23.59■■□□□ 1.37
PHF1-209ENST00000487667 CDC42EP5Q6NZY7 148 aa23.59■■□□□ 1.37
PHF1-209ENST00000487667 DHX36Q9H2U1 1008 aaKnown RBP23.59■■□□□ 1.37
PHF1-209ENST00000487667 CD2APQ9Y5K6 639 aa23.59■■□□□ 1.37
PHF1-209ENST00000487667 YEATS4O95619 227 aa23.58■■□□□ 1.37
PHF1-209ENST00000487667 EVX2Q03828 476 aa23.58■■□□□ 1.37
PHF1-209ENST00000487667 RCSD1Q6JBY9 416 aa23.58■■□□□ 1.37
PHF1-209ENST00000487667 LRSAM1Q6UWE0 723 aa23.58■■□□□ 1.37
PHF1-209ENST00000487667 TMTC3Q6ZXV5 915 aa23.58■■□□□ 1.37
PHF1-209ENST00000487667 POLR3EQ9NVU0 708 aa23.58■■□□□ 1.37
PHF1-209ENST00000487667 U2AF2P26368 475 aaKnown RBP eCLIP23.57■■□□□ 1.363e-7■■■□□ 14.7
PHF1-209ENST00000487667 MYSM1Q5VVJ2 828 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 OSBPL5Q9H0X9 879 aaPredicted RBP23.57■■□□□ 1.36
PHF1-209ENST00000487667 PLIN4Q96Q06 1357 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 KIAA0825Q8IV33 1275 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 PNMA1Q8ND90 353 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 KCNG4Q8TDN1 519 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 LZTS2Q9BRK4 669 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 MXD3Q9BW11 206 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 IDI2Q9BXS1 227 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 EHD4Q9H223 541 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 GRPEL1Q9HAV7 217 aa23.57■■□□□ 1.36
PHF1-209ENST00000487667 IL17RBQ9NRM6 502 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms