RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 ZBTB21Q9ULJ3 1066 aa28.64■■■□□ 2.18
PLOD3-215ENST00000487563 MYH1P12882 1939 aa28.64■■■□□ 2.18
PLOD3-215ENST00000487563 MAGEB6P1A0A0J9YX57 407 aa28.63■■■□□ 2.17
PLOD3-215ENST00000487563 SH3D19Q5HYK7 790 aa28.63■■■□□ 2.17
PLOD3-215ENST00000487563 SLC9C2Q5TAH2 1124 aa28.63■■■□□ 2.17
PLOD3-215ENST00000487563 C20orf194Q5TEA3 1177 aa28.63■■■□□ 2.17
PLOD3-215ENST00000487563 PDE6AP16499 860 aa28.62■■■□□ 2.17
PLOD3-215ENST00000487563 GCLCP48506 637 aaPredicted RBP28.62■■■□□ 2.17
PLOD3-215ENST00000487563 BACE1P56817 501 aa28.62■■■□□ 2.17
PLOD3-215ENST00000487563 FAM110CQ1W6H9 321 aa28.62■■■□□ 2.17
PLOD3-215ENST00000487563 GABRQQ9UN88 632 aa28.62■■■□□ 2.17
PLOD3-215ENST00000487563 UBXN2AP68543 259 aa28.61■■■□□ 2.17
PLOD3-215ENST00000487563 IRX3P78415 501 aaPredicted RBP28.61■■■□□ 2.17
PLOD3-215ENST00000487563 JAG1P78504 1218 aa28.61■■■□□ 2.17
PLOD3-215ENST00000487563 TTC6Q86TZ1 520 aa28.61■■■□□ 2.17
PLOD3-215ENST00000487563 SLAIN1Q8ND83 568 aa28.61■■■□□ 2.17
PLOD3-215ENST00000487563 ASCC2Q9H1I8 757 aaPredicted RBP28.61■■■□□ 2.17
PLOD3-215ENST00000487563 SERPINB13Q9UIV8 391 aa28.61■■■□□ 2.17
PLOD3-215ENST00000487563 MTFR1Q15390 333 aa28.6■■■□□ 2.17
PLOD3-215ENST00000487563 SHROOM1Q2M3G4 852 aaPredicted RBP28.6■■■□□ 2.17
PLOD3-215ENST00000487563 COA7Q96BR5 231 aa28.6■■■□□ 2.17
PLOD3-215ENST00000487563 RIOK1Q9BRS2 568 aaKnown RBP28.6■■■□□ 2.17
PLOD3-215ENST00000487563 CRNKL1Q9BZJ0 848 aaKnown RBP28.6■■■□□ 2.17
PLOD3-215ENST00000487563 C19orf81C9J6K1 198 aa28.59■■■□□ 2.17
PLOD3-215ENST00000487563 USP17L10C9JJH3 530 aa28.59■■■□□ 2.17
PLOD3-215ENST00000487563 FLT3LGP49771 235 aa28.59■■■□□ 2.17
PLOD3-215ENST00000487563 EHD4Q9H223 541 aa28.59■■■□□ 2.17
PLOD3-215ENST00000487563 TAOK2Q9UL54 1235 aa28.59■■■□□ 2.17
PLOD3-215ENST00000487563 ZNF532Q9HCE3 1301 aa28.59■■■□□ 2.17
PLOD3-215ENST00000487563 GH2P01242 217 aa28.58■■■□□ 2.17
PLOD3-215ENST00000487563 PAG1Q9NWQ8 432 aa28.58■■■□□ 2.17
PLOD3-215ENST00000487563 NAV1Q8NEY1 1877 aa28.57■■■□□ 2.16
PLOD3-215ENST00000487563 ADCY3O60266 1144 aa28.57■■■□□ 2.16
PLOD3-215ENST00000487563 POLR3DP05423 398 aaPredicted RBP28.57■■■□□ 2.16
PLOD3-215ENST00000487563 EDC3Q96F86 508 aaKnown RBP28.57■■■□□ 2.16
PLOD3-215ENST00000487563 LRRCC1Q9C099 1032 aa28.57■■■□□ 2.16
PLOD3-215ENST00000487563 BOLA2Q9H3K6 86 aa28.57■■■□□ 2.16
PLOD3-215ENST00000487563 CCL5P13501 91 aa28.56■■■□□ 2.16
PLOD3-215ENST00000487563 FEZ1Q99689 392 aa28.56■■■□□ 2.16
PLOD3-215ENST00000487563 BRCA2P51587 3418 aa28.55■■■□□ 2.16
PLOD3-215ENST00000487563 ATP5JP18859 108 aa28.55■■■□□ 2.16
PLOD3-215ENST00000487563 CERKLQ49MI3 558 aaPredicted RBP28.55■■■□□ 2.16
PLOD3-215ENST00000487563 TATDN1Q6P1N9 297 aa28.55■■■□□ 2.16
PLOD3-215ENST00000487563 NKX2-3Q8TAU0 364 aa28.55■■■□□ 2.16
PLOD3-215ENST00000487563 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.55■■■□□ 2.16
PLOD3-215ENST00000487563 RNF208Q9H0X6 261 aa28.55■■■□□ 2.16
PLOD3-215ENST00000487563 ELNP15502 786 aa28.54■■■□□ 2.16
PLOD3-215ENST00000487563 RAB3GAP1Q15042 981 aa28.54■■■□□ 2.16
PLOD3-215ENST00000487563 USP17L2Q6R6M4 530 aa28.54■■■□□ 2.16
PLOD3-215ENST00000487563 CABP5Q9NP86 173 aa28.54■■■□□ 2.16
PLOD3-215ENST00000487563 MCM9Q9NXL9 1143 aa28.54■■■□□ 2.16
PLOD3-215ENST00000487563 DDX60LQ5H9U9 1706 aaKnown RBP28.54■■■□□ 2.16
PLOD3-215ENST00000487563 TCRBV5S4A2TA0A5A2 114 aa28.53■■■□□ 2.16
PLOD3-215ENST00000487563 HOXA7P31268 230 aaPredicted RBP28.53■■■□□ 2.16
PLOD3-215ENST00000487563 IRF5Q13568 498 aa28.53■■■□□ 2.16
PLOD3-215ENST00000487563 ABCB5Q2M3G0 1257 aa28.53■■■□□ 2.16
PLOD3-215ENST00000487563 PLCD1P51178 756 aa28.52■■■□□ 2.16
PLOD3-215ENST00000487563 ZYXQ15942 572 aaKnown RBP28.52■■■□□ 2.16
PLOD3-215ENST00000487563 LCORLQ8N3X6 602 aa28.52■■■□□ 2.16
PLOD3-215ENST00000487563 PXYLP1Q8TE99 480 aa28.52■■■□□ 2.16
PLOD3-215ENST00000487563 HAUS7Q99871 368 aa28.52■■■□□ 2.16
PLOD3-215ENST00000487563 INHAP05111 366 aa28.51■■■□□ 2.15
PLOD3-215ENST00000487563 GJB1P08034 283 aa28.51■■■□□ 2.15
PLOD3-215ENST00000487563 HERVK_113P62684 666 aa28.51■■■□□ 2.15
PLOD3-215ENST00000487563 SDR42E1Q8WUS8 393 aa28.51■■■□□ 2.15
PLOD3-215ENST00000487563 P2RX7Q99572 595 aaKnown RBP28.51■■■□□ 2.15
PLOD3-215ENST00000487563 ARMT1Q9H993 441 aa28.51■■■□□ 2.15
PLOD3-215ENST00000487563 MORF4L1Q9UBU8 362 aa28.51■■■□□ 2.15
PLOD3-215ENST00000487563 MKI67P46013 3256 aaKnown RBP28.51■■■□□ 2.15
PLOD3-215ENST00000487563 SMARCA5O60264 1052 aaPredicted RBP28.5■■■□□ 2.15
PLOD3-215ENST00000487563 SLC34A2O95436 690 aa28.5■■■□□ 2.15
PLOD3-215ENST00000487563 SHMT1P34896 483 aa28.5■■■□□ 2.15
PLOD3-215ENST00000487563 ADD2P35612 726 aa28.5■■■□□ 2.15
PLOD3-215ENST00000487563 SHISA4Q96DD7 197 aa28.5■■■□□ 2.15
PLOD3-215ENST00000487563 UNC93B1Q9H1C4 597 aa28.5■■■□□ 2.15
PLOD3-215ENST00000487563 EMILIN3Q9NT22 766 aa28.5■■■□□ 2.15
PLOD3-215ENST00000487563 MBD4O95243 580 aa28.49■■■□□ 2.15
PLOD3-215ENST00000487563 GJA8P48165 433 aa28.49■■■□□ 2.15
PLOD3-215ENST00000487563 USP14P54578 494 aa28.48■■■□□ 2.15
PLOD3-215ENST00000487563 GTF3C2Q8WUA4 911 aaPredicted RBP28.48■■■□□ 2.15
PLOD3-215ENST00000487563 GCC1Q96CN9 775 aa28.48■■■□□ 2.15
PLOD3-215ENST00000487563 DCP1AQ9NPI6 582 aaPredicted RBP28.48■■■□□ 2.15
PLOD3-215ENST00000487563 MPHOSPH10O00566 681 aaKnown RBP28.47■■■□□ 2.15
PLOD3-215ENST00000487563 CCAR1Q8IX12 1150 aaKnown RBP28.47■■■□□ 2.15
PLOD3-215ENST00000487563 GPRC5AQ8NFJ5 357 aa28.47■■■□□ 2.15
PLOD3-215ENST00000487563 PAGR1Q9BTK6 254 aa28.47■■■□□ 2.15
PLOD3-215ENST00000487563 SLFNL1Q499Z3 407 aa28.46■■■□□ 2.15
PLOD3-215ENST00000487563 ZSCAN25Q6NSZ9 544 aa28.46■■■□□ 2.15
PLOD3-215ENST00000487563 U2AF1L4Q8WU68 220 aaKnown RBP28.46■■■□□ 2.15
PLOD3-215ENST00000487563 GPATCH3Q96I76 525 aa28.46■■■□□ 2.15
PLOD3-215ENST00000487563 C12orf42Q96LP6 360 aa28.46■■■□□ 2.15
PLOD3-215ENST00000487563 KIAA1683Q9H0B3 1180 aa28.46■■■□□ 2.15
PLOD3-215ENST00000487563 DOCK3Q8IZD9 2030 aa28.45■■■□□ 2.15
PLOD3-215ENST00000487563 GABPAQ06546 454 aa28.45■■■□□ 2.14
PLOD3-215ENST00000487563 AMOTL1Q8IY63 956 aa28.45■■■□□ 2.14
PLOD3-215ENST00000487563 DDRGK1Q96HY6 314 aa28.45■■■□□ 2.14
PLOD3-215ENST00000487563 TXNRD2Q9NNW7 524 aa28.45■■■□□ 2.14
PLOD3-215ENST00000487563 ECHDC1Q9NTX5 307 aa28.45■■■□□ 2.14
PLOD3-215ENST00000487563 USP17L15C9J2P7 530 aa28.44■■■□□ 2.14
PLOD3-215ENST00000487563 USP17L13C9JLJ4 530 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms