RNA–Protein interactions for RNA: ENST00000487428.1

PTPRE-209, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 325 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-209ENST00000487428 PTPRAP18433 802 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 INPP5BP32019 993 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 CDK8P49336 464 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 VEGFBP49765 207 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 ZNF157P51786 506 aaPredicted RBP7.93□□□□□ -1.14
PTPRE-209ENST00000487428 GTF2A2P52657 109 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 MAP2K1Q02750 393 aaPredicted RBP7.93□□□□□ -1.14
PTPRE-209ENST00000487428 PDE4BQ07343 736 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 PPARAQ07869 468 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 SREBF2Q12772 1141 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 TTLL12Q14166 644 aaPredicted RBP7.93□□□□□ -1.14
PTPRE-209ENST00000487428 CASC1Q6TDU7 716 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 CWC27Q6UX04 472 aaKnown RBP7.93□□□□□ -1.14
PTPRE-209ENST00000487428 TMEM179Q6ZVK1 233 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 MIGA2Q7L4E1 593 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 CRACR2BQ8N4Y2 399 aaPredicted RBP7.93□□□□□ -1.14
PTPRE-209ENST00000487428 ESYT1Q9BSJ8 1104 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 MTA3Q9BTC8 594 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 BCL11AQ9H165 835 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 ZNF408Q9H9D4 720 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 TCP11L1Q9NUJ3 509 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 SAGE1Q9NXZ1 904 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 SCAF8Q9UPN6 1271 aaKnown RBP7.93□□□□□ -1.14
PTPRE-209ENST00000487428 AFG3L2Q9Y4W6 797 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 MGAMO43451 1857 aa7.93□□□□□ -1.14
PTPRE-209ENST00000487428 DOCK3Q8IZD9 2030 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 USP17L5A8MUK1 530 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 RASA1P20936 1047 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 TDO2P48775 406 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 TSGA10IPQ3SY00 556 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 CERKLQ49MI3 558 aaPredicted RBP7.92□□□□□ -1.14
PTPRE-209ENST00000487428 VPS53Q5VIR6 699 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 PROCA1Q8NCQ7 364 aaPredicted RBP7.92□□□□□ -1.14
PTPRE-209ENST00000487428 STAG1Q8WVM7 1258 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 OPTNQ96CV9 577 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 CLMNQ96JQ2 1002 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 C12orf42Q96LP6 360 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 IL25Q9H293 177 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 RNF41Q9H4P4 317 aaPredicted RBP7.92□□□□□ -1.14
PTPRE-209ENST00000487428 AS3MTQ9HBK9 375 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 PICK1Q9NRD5 415 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 ZBTB21Q9ULJ3 1066 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 U3KPZ7 1027 aaPredicted RBP7.92□□□□□ -1.14
PTPRE-209ENST00000487428 A0A0G2JMZ2 1700 aa7.92□□□□□ -1.14
PTPRE-209ENST00000487428 IGKV6D-41A0A0C4DH26 115 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 A0A0G2JLL6 359 aaPredicted RBP7.91□□□□□ -1.14
PTPRE-209ENST00000487428 IRF6O14896 467 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 APPP05067 770 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 CETPP11597 493 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 HOXA7P31268 230 aaPredicted RBP7.91□□□□□ -1.14
PTPRE-209ENST00000487428 GUCY1A2P33402 732 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 GJA5P36382 358 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 BACE1P56817 501 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 SNAPC2Q13487 334 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 RRP1BQ14684 758 aaKnown RBP7.91□□□□□ -1.14
PTPRE-209ENST00000487428 NECTIN1Q15223 517 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 ABCB5Q2M3G0 1257 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 CCDC178Q5BJE1 867 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 AKNAD1Q5T1N1 836 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 CYP4F22Q6NT55 531 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 CCDC129Q6ZRS4 1044 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 MOB2Q70IA6 237 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 FASTKD5Q7L8L6 764 aaKnown RBP7.91□□□□□ -1.14
PTPRE-209ENST00000487428 PRRT2Q7Z6L0 340 aaPredicted RBP7.91□□□□□ -1.14
PTPRE-209ENST00000487428 ZNF280CQ8ND82 737 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 NEDD1Q8NHV4 660 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 KCNB2Q92953 911 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 ZKSCAN4Q969J2 545 aaPredicted RBP7.91□□□□□ -1.14
PTPRE-209ENST00000487428 MKL1Q969V6 931 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 IL17RAQ96F46 866 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 TTC14Q96N46 770 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 TRIM34Q9BYJ4 488 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 LSG1Q9H089 658 aaKnown RBP7.91□□□□□ -1.14
PTPRE-209ENST00000487428 KIAA1683Q9H0B3 1180 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 CNNM2Q9H8M5 875 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 KANSL2Q9H9L4 492 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 CABP5Q9NP86 173 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 WBP1LQ9NX94 342 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 NYAP2Q9P242 653 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 SAP30BPQ9UHR5 308 aaKnown RBP7.91□□□□□ -1.14
PTPRE-209ENST00000487428 MYH6P13533 1939 aa7.91□□□□□ -1.14
PTPRE-209ENST00000487428 CASP8AP2Q9UKL3 1982 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 ZNF213O14771 459 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 REC8O95072 547 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 USP14P54578 494 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 MOGSQ13724 837 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 IMMTQ16891 758 aaKnown RBP7.9□□□□□ -1.14
PTPRE-209ENST00000487428 OTUD7BQ6GQQ9 843 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 KIAA1211Q6ZU35 1233 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 ANKRD23Q86SG2 305 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 IL27Q8NEV9 243 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 ANKS1AQ92625 1134 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 LPAR1Q92633 364 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.9□□□□□ -1.14
PTPRE-209ENST00000487428 NBPF3Q9H094 633 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 SH2D4AQ9H788 454 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 TMX2Q9Y320 296 aa7.9□□□□□ -1.14
PTPRE-209ENST00000487428 ZNFX1Q9P2E3 1918 aaKnown RBP7.9□□□□□ -1.15
PTPRE-209ENST00000487428 COL11A1P12107 1806 aaPredicted RBP7.89□□□□□ -1.15
PTPRE-209ENST00000487428 MYPNQ86TC9 1320 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms