RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 HEXIM2Q96MH2 286 aaKnown RBP7.09□□□□□ -1.27
LINC00888-204ENST00000487386 SLITRK5O94991 958 aa7.08□□□□□ -1.28
LINC00888-204ENST00000487386 CRKP46108 304 aa7.08□□□□□ -1.28
LINC00888-204ENST00000487386 SLC6A19Q695T7 634 aa7.08□□□□□ -1.28
LINC00888-204ENST00000487386 USP48Q86UV5 1035 aa7.08□□□□□ -1.28
LINC00888-204ENST00000487386 MCATQ8IVS2 390 aaKnown RBP7.08□□□□□ -1.28
LINC00888-204ENST00000487386 ACSF2Q96CM8 615 aaPredicted RBP7.08□□□□□ -1.28
LINC00888-204ENST00000487386 TMEM87BQ96K49 555 aa7.08□□□□□ -1.28
LINC00888-204ENST00000487386 NT5C1AQ9BXI3 368 aa7.08□□□□□ -1.28
LINC00888-204ENST00000487386 ZC3H7BQ9UGR2 993 aaKnown RBP7.08□□□□□ -1.28
LINC00888-204ENST00000487386 DDX41Q9UJV9 622 aaKnown RBP7.08□□□□□ -1.28
LINC00888-204ENST00000487386 U3KQE9 123 aa7.08□□□□□ -1.28
LINC00888-204ENST00000487386 IGF2BP3O00425 579 aaKnown RBP eCLIP7.07□□□□□ -1.28
LINC00888-204ENST00000487386 PRNPP04156 253 aa7.07□□□□□ -1.28
LINC00888-204ENST00000487386 RACK1P63244 317 aaKnown RBP7.07□□□□□ -1.28
LINC00888-204ENST00000487386 ZNF394Q53GI3 561 aa7.07□□□□□ -1.28
LINC00888-204ENST00000487386 PRAMEF13Q5VWM6 474 aa7.07□□□□□ -1.28
LINC00888-204ENST00000487386 EAF1Q96JC9 268 aaPredicted RBP7.07□□□□□ -1.28
LINC00888-204ENST00000487386 MKNK2Q9HBH9 465 aa7.07□□□□□ -1.28
LINC00888-204ENST00000487386 LRRC4CQ9HCJ2 640 aa7.07□□□□□ -1.28
LINC00888-204ENST00000487386 PCMTD2Q9NV79 361 aa7.07□□□□□ -1.28
LINC00888-204ENST00000487386 TLR3O15455 904 aaKnown RBP7.06□□□□□ -1.28
LINC00888-204ENST00000487386 ADAMTS4O75173 837 aa7.06□□□□□ -1.28
LINC00888-204ENST00000487386 ATE1O95260 518 aa7.06□□□□□ -1.28
LINC00888-204ENST00000487386 PLCG1P19174 1290 aa7.06□□□□□ -1.28
LINC00888-204ENST00000487386 OXCT1P55809 520 aa7.06□□□□□ -1.28
LINC00888-204ENST00000487386 HDLBPQ00341 1268 aaKnown RBP7.06□□□□□ -1.28
LINC00888-204ENST00000487386 CWF19L2Q2TBE0 894 aaKnown RBP7.06□□□□□ -1.28
LINC00888-204ENST00000487386 RIN3Q8TB24 985 aa7.06□□□□□ -1.28
LINC00888-204ENST00000487386 ZNF428Q96B54 188 aa7.06□□□□□ -1.28
LINC00888-204ENST00000487386 UBP1Q9NZI7 540 aa7.06□□□□□ -1.28
LINC00888-204ENST00000487386 GRIN3BO60391 1043 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 HTR3BO95264 441 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 KIAA0825Q8IV33 1275 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 SLITRK4Q8IW52 837 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 SPON2Q9BUD6 331 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 EHMT1Q9H9B1 1298 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 BRMS1Q9HCU9 246 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 REV1Q9UBZ9 1251 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 GTF2IRD1Q9UHL9 959 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 PCDHGB7Q9Y5F8 929 aa7.05□□□□□ -1.28
LINC00888-204ENST00000487386 CNTNAP4Q9C0A0 1308 aa7.04□□□□□ -1.28
LINC00888-204ENST00000487386 UPK3BL1B0FP48 263 aa7.04□□□□□ -1.28
LINC00888-204ENST00000487386 UPK3BL2E5RIL1 263 aa7.04□□□□□ -1.28
LINC00888-204ENST00000487386 LETMD1Q6P1Q0 360 aa7.04□□□□□ -1.28
LINC00888-204ENST00000487386 NFXL1Q6ZNB6 911 aa7.04□□□□□ -1.28
LINC00888-204ENST00000487386 FAM181AQ8N9Y4 354 aa7.04□□□□□ -1.28
LINC00888-204ENST00000487386 MIPEPQ99797 713 aa7.04□□□□□ -1.28
LINC00888-204ENST00000487386 DPH2Q9BQC3 489 aaPredicted RBP7.04□□□□□ -1.28
LINC00888-204ENST00000487386 BSDC1Q9NW68 430 aaPredicted RBP7.04□□□□□ -1.28
LINC00888-204ENST00000487386 PLAGL2Q9UPG8 496 aa7.04□□□□□ -1.28
LINC00888-204ENST00000487386 DNAJA2O60884 412 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 APOBRQ0VD83 1088 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 SEZ6Q53EL9 994 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 C22orf34Q6ZV56 151 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 SLFN12Q8IYM2 578 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 ZNF654Q8IZM8 581 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 REXO1Q8N1G1 1221 aaKnown RBP7.03□□□□□ -1.28
LINC00888-204ENST00000487386 PLD6Q8N2A8 252 aaKnown RBP7.03□□□□□ -1.28
LINC00888-204ENST00000487386 DNAJB8Q8NHS0 232 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 PPP1R13LQ8WUF5 828 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 TNKS2Q9H2K2 1166 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 CCDC39Q9UFE4 941 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 MAPK8IP1Q9UQF2 711 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 PCDHB14Q9Y5E9 798 aa7.03□□□□□ -1.28
LINC00888-204ENST00000487386 CHURC1-FNTBB4DL54 471 aa7.02□□□□□ -1.29
LINC00888-204ENST00000487386 CEACAM5P06731 702 aa7.02□□□□□ -1.29
LINC00888-204ENST00000487386 NT5DC4Q86YG4 428 aa7.02□□□□□ -1.29
LINC00888-204ENST00000487386 FAM13CQ8NE31 585 aa7.02□□□□□ -1.29
LINC00888-204ENST00000487386 NETO1Q8TDF5 533 aa7.02□□□□□ -1.29
LINC00888-204ENST00000487386 XAGE3Q8WTP9 111 aa7.02□□□□□ -1.29
LINC00888-204ENST00000487386 NKD1Q969G9 470 aa7.02□□□□□ -1.29
LINC00888-204ENST00000487386 PRDM5Q9NQX1 630 aaPredicted RBP7.02□□□□□ -1.29
LINC00888-204ENST00000487386 CEP131Q9UPN4 1083 aa7.02□□□□□ -1.29
LINC00888-204ENST00000487386 ZNF865P0CJ78 1059 aaPredicted RBP7.01□□□□□ -1.29
LINC00888-204ENST00000487386 YARSP54577 528 aaKnown RBP7.01□□□□□ -1.29
LINC00888-204ENST00000487386 CLCQ05315 142 aa7.01□□□□□ -1.29
LINC00888-204ENST00000487386 RAD51AP2Q09MP3 1159 aa7.01□□□□□ -1.29
LINC00888-204ENST00000487386 C9orf131Q5VYM1 1079 aa7.01□□□□□ -1.29
LINC00888-204ENST00000487386 WFDC3Q8IUB2 231 aa7.01□□□□□ -1.29
LINC00888-204ENST00000487386 CYB5D2Q8WUJ1 264 aa7.01□□□□□ -1.29
LINC00888-204ENST00000487386 COL17A1Q9UMD9 1497 aaPredicted RBP7□□□□□ -1.29
LINC00888-204ENST00000487386 SLC22A31A6NKX4 558 aa7□□□□□ -1.29
LINC00888-204ENST00000487386 RBAK-RBAKDNI3L0D1 243 aa7□□□□□ -1.29
LINC00888-204ENST00000487386 WNT11O96014 354 aa7□□□□□ -1.29
LINC00888-204ENST00000487386 ZNF165P49910 485 aa7□□□□□ -1.29
LINC00888-204ENST00000487386 IFI16Q16666 785 aaKnown RBP7□□□□□ -1.29
LINC00888-204ENST00000487386 NKPD1Q17RQ9 610 aa7□□□□□ -1.29
LINC00888-204ENST00000487386 ZNF746Q6NUN9 644 aaPredicted RBP7□□□□□ -1.29
LINC00888-204ENST00000487386 CDH24Q86UP0 819 aa7□□□□□ -1.29
LINC00888-204ENST00000487386 VSIG10LQ86VR7 867 aa7□□□□□ -1.29
LINC00888-204ENST00000487386 SPACA3Q8IXA5 215 aa7□□□□□ -1.29
LINC00888-204ENST00000487386 BCL7CQ8WUZ0 217 aaPredicted RBP7□□□□□ -1.29
LINC00888-204ENST00000487386 SNX11Q9Y5W9 270 aa7□□□□□ -1.29
LINC00888-204ENST00000487386 TMEM265A0A087WTH1 108 aa6.99□□□□□ -1.29
LINC00888-204ENST00000487386 PRR33A8MZF0 331 aa6.99□□□□□ -1.29
LINC00888-204ENST00000487386 PRKCQQ04759 706 aa6.99□□□□□ -1.29
LINC00888-204ENST00000487386 SFRP5Q5T4F7 317 aa6.99□□□□□ -1.29
LINC00888-204ENST00000487386 MISP3Q96FF7 219 aa6.99□□□□□ -1.29
LINC00888-204ENST00000487386 COX4I2Q96KJ9 171 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms