RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 EOMESO95936 686 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 C9orf131Q5VYM1 1079 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 REC114Q7Z4M0 266 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 USP48Q86UV5 1035 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 GIMAP7Q8NHV1 300 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 RIN3Q8TB24 985 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 FOXQ1Q9C009 403 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 PRDM10Q9NQV6 1147 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 UBP1Q9NZI7 540 aa7.63□□□□□ -1.19
COPS3-209ENST00000486810 SUPT16HQ9Y5B9 1047 aaKnown RBP7.63□□□□□ -1.19
COPS3-209ENST00000486810 CYP26A1O43174 497 aa7.62□□□□□ -1.19
COPS3-209ENST00000486810 DNAJA2O60884 412 aa7.62□□□□□ -1.19
COPS3-209ENST00000486810 BPNT1O95861 308 aa7.62□□□□□ -1.19
COPS3-209ENST00000486810 CST3P01034 146 aaPredicted RBP7.62□□□□□ -1.19
COPS3-209ENST00000486810 CYP27A1Q02318 531 aa7.62□□□□□ -1.19
COPS3-209ENST00000486810 PRAMEF13Q5VWM6 474 aa7.62□□□□□ -1.19
COPS3-209ENST00000486810 DUSP27Q5VZP5 1158 aa7.62□□□□□ -1.19
COPS3-209ENST00000486810 DTX1Q86Y01 620 aa7.62□□□□□ -1.19
COPS3-209ENST00000486810 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
COPS3-209ENST00000486810 TMEM87BQ96K49 555 aa7.62□□□□□ -1.19
COPS3-209ENST00000486810 DPH2Q9BQC3 489 aaPredicted RBP7.62□□□□□ -1.19
COPS3-209ENST00000486810 LRRC4CQ9HCJ2 640 aa7.62□□□□□ -1.19
COPS3-209ENST00000486810 ZC3H7BQ9UGR2 993 aaKnown RBP7.62□□□□□ -1.19
COPS3-209ENST00000486810 DDX41Q9UJV9 622 aaKnown RBP7.62□□□□□ -1.19
COPS3-209ENST00000486810 CLSPNQ9HAW4 1339 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 SCO2A0A1W2PP80 73 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 UPK3BL1B0FP48 263 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 UPK3BL2E5RIL1 263 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 CYP27C1Q4G0S4 372 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 GLIPR1L2Q4G1C9 344 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 TMEM201Q5SNT2 666 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 INTS5Q6P9B9 1019 aaKnown RBP7.61□□□□□ -1.19
COPS3-209ENST00000486810 NFXL1Q6ZNB6 911 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 MCATQ8IVS2 390 aaKnown RBP7.61□□□□□ -1.19
COPS3-209ENST00000486810 FAM181AQ8N9Y4 354 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 BRMS1Q9HCU9 246 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 ADAM30Q9UKF2 790 aa7.61□□□□□ -1.19
COPS3-209ENST00000486810 ROBO2Q9HCK4 1378 aa7.6□□□□□ -1.19
COPS3-209ENST00000486810 PLCG1P19174 1290 aa7.6□□□□□ -1.19
COPS3-209ENST00000486810 PDE4BQ07343 736 aa7.6□□□□□ -1.19
COPS3-209ENST00000486810 XAGE3Q8WTP9 111 aa7.6□□□□□ -1.19
COPS3-209ENST00000486810 NT5C1AQ9BXI3 368 aa7.6□□□□□ -1.19
COPS3-209ENST00000486810 ZFP64Q9NPA5 681 aa7.6□□□□□ -1.19
COPS3-209ENST00000486810 REV1Q9UBZ9 1251 aa7.6□□□□□ -1.19
COPS3-209ENST00000486810 HTR3BO95264 441 aa7.59□□□□□ -1.19
COPS3-209ENST00000486810 HSP90B1P14625 803 aaKnown RBP7.59□□□□□ -1.19
COPS3-209ENST00000486810 CDK11BP21127 795 aaKnown RBP7.59□□□□□ -1.19
COPS3-209ENST00000486810 GRIK1P39086 918 aa7.59□□□□□ -1.19
COPS3-209ENST00000486810 OXCT1P55809 520 aa7.59□□□□□ -1.19
COPS3-209ENST00000486810 SLC6A19Q695T7 634 aa7.59□□□□□ -1.19
COPS3-209ENST00000486810 KIAA0825Q8IV33 1275 aa7.59□□□□□ -1.19
COPS3-209ENST00000486810 MFSD2AQ8NA29 543 aa7.59□□□□□ -1.19
COPS3-209ENST00000486810 MIPEPQ99797 713 aa7.59□□□□□ -1.19
COPS3-209ENST00000486810 SPON2Q9BUD6 331 aa7.59□□□□□ -1.19
COPS3-209ENST00000486810 PLAGL2Q9UPG8 496 aa7.59□□□□□ -1.19
COPS3-209ENST00000486810 CHURC1-FNTBB4DL54 471 aa7.58□□□□□ -1.2
COPS3-209ENST00000486810 RAD51AP2Q09MP3 1159 aa7.58□□□□□ -1.2
COPS3-209ENST00000486810 SEZ6Q53EL9 994 aa7.58□□□□□ -1.2
COPS3-209ENST00000486810 NT5DC4Q86YG4 428 aa7.58□□□□□ -1.2
COPS3-209ENST00000486810 WFDC3Q8IUB2 231 aa7.58□□□□□ -1.2
COPS3-209ENST00000486810 SLITRK4Q8IW52 837 aa7.58□□□□□ -1.2
COPS3-209ENST00000486810 PLD6Q8N2A8 252 aaKnown RBP7.58□□□□□ -1.2
COPS3-209ENST00000486810 PPP1R13LQ8WUF5 828 aa7.58□□□□□ -1.2
COPS3-209ENST00000486810 PCMTD2Q9NV79 361 aa7.58□□□□□ -1.2
COPS3-209ENST00000486810 BCCIPQ9P287 314 aaKnown RBP eCLIP7.58□□□□□ -1.2
COPS3-209ENST00000486810 ATE1O95260 518 aa7.57□□□□□ -1.2
COPS3-209ENST00000486810 RBM25P49756 843 aaKnown RBP7.57□□□□□ -1.2
COPS3-209ENST00000486810 CLCQ05315 142 aa7.57□□□□□ -1.2
COPS3-209ENST00000486810 CWF19L2Q2TBE0 894 aaKnown RBP7.57□□□□□ -1.2
COPS3-209ENST00000486810 LETMD1Q6P1Q0 360 aa7.57□□□□□ -1.2
COPS3-209ENST00000486810 PCDHB14Q9Y5E9 798 aa7.57□□□□□ -1.2
COPS3-209ENST00000486810 LOC105371045A0A1W2PR82 267 aa7.56□□□□□ -1.2
COPS3-209ENST00000486810 PRR33A8MZF0 331 aa7.56□□□□□ -1.2
COPS3-209ENST00000486810 IGF2BP3O00425 579 aaKnown RBP eCLIP7.56□□□□□ -1.2
COPS3-209ENST00000486810 APOBRQ0VD83 1088 aa7.56□□□□□ -1.2
COPS3-209ENST00000486810 FAM13CQ8NE31 585 aa7.56□□□□□ -1.2
COPS3-209ENST00000486810 DNAJB8Q8NHS0 232 aa7.56□□□□□ -1.2
COPS3-209ENST00000486810 NKD1Q969G9 470 aa7.56□□□□□ -1.2
COPS3-209ENST00000486810 EHMT1Q9H9B1 1298 aa7.56□□□□□ -1.2
COPS3-209ENST00000486810 PRNPP04156 253 aa7.55□□□□□ -1.2
COPS3-209ENST00000486810 XP32Q5T750 250 aa7.55□□□□□ -1.2
COPS3-209ENST00000486810 CDH24Q86UP0 819 aa7.55□□□□□ -1.2
COPS3-209ENST00000486810 SLFN12Q8IYM2 578 aa7.55□□□□□ -1.2
COPS3-209ENST00000486810 MKNK2Q9HBH9 465 aa7.55□□□□□ -1.2
COPS3-209ENST00000486810 CCDC39Q9UFE4 941 aa7.55□□□□□ -1.2
COPS3-209ENST00000486810 COL17A1Q9UMD9 1497 aaPredicted RBP7.55□□□□□ -1.2
COPS3-209ENST00000486810 SLC22A31A6NKX4 558 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 CEACAM5P06731 702 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 PAK2Q13177 524 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 NKPD1Q17RQ9 610 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 DIEXFQ68CQ4 756 aaKnown RBP7.54□□□□□ -1.2
COPS3-209ENST00000486810 GK5Q6ZS86 529 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 ZNF654Q8IZM8 581 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 TNKS2Q9H2K2 1166 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 ANTXR1Q9H6X2 564 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 KLHL3Q9UH77 587 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 GTF2IRD1Q9UHL9 959 aa7.54□□□□□ -1.2
COPS3-209ENST00000486810 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.54□□□□□ -1.2
COPS3-209ENST00000486810 ITIH2P19823 946 aa7.53□□□□□ -1.2
COPS3-209ENST00000486810 SPACA3Q8IXA5 215 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms