RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 LMCD1Q9NZU5 365 aa7.72□□□□□ -1.17
SMC4-218ENST00000486711 FAM155AB1AL88 458 aaPredicted RBP7.71□□□□□ -1.18
SMC4-218ENST00000486711 ZNF865P0CJ78 1059 aaPredicted RBP7.71□□□□□ -1.18
SMC4-218ENST00000486711 CCDC85BQ15834 202 aaPredicted RBP7.71□□□□□ -1.18
SMC4-218ENST00000486711 ZNF746Q6NUN9 644 aaPredicted RBP7.71□□□□□ -1.18
SMC4-218ENST00000486711 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.71□□□□□ -1.18
SMC4-218ENST00000486711 ZSWIM9Q86XI8 627 aa7.71□□□□□ -1.18
SMC4-218ENST00000486711 MFSD4AQ8N468 514 aa7.71□□□□□ -1.18
SMC4-218ENST00000486711 NKG7Q16617 165 aa7.7□□□□□ -1.18
SMC4-218ENST00000486711 TACC3Q9Y6A5 838 aa7.7□□□□□ -1.18
SMC4-218ENST00000486711 AK5Q9Y6K8 562 aa7.7□□□□□ -1.18
SMC4-218ENST00000486711 PKN1Q16512 942 aa7.69□□□□□ -1.18
SMC4-218ENST00000486711 KCNMB1Q16558 191 aa7.69□□□□□ -1.18
SMC4-218ENST00000486711 LETMD1Q6P1Q0 360 aa7.69□□□□□ -1.18
SMC4-218ENST00000486711 COX4I2Q96KJ9 171 aa7.69□□□□□ -1.18
SMC4-218ENST00000486711 HSPA12BQ96MM6 686 aa7.69□□□□□ -1.18
SMC4-218ENST00000486711 SEMA3GQ9NS98 782 aa7.69□□□□□ -1.18
SMC4-218ENST00000486711 FAM53CQ9NYF3 392 aa7.69□□□□□ -1.18
SMC4-218ENST00000486711 CTNND2Q9UQB3 1225 aa7.69□□□□□ -1.18
SMC4-218ENST00000486711 PRR33A8MZF0 331 aa7.68□□□□□ -1.18
SMC4-218ENST00000486711 CST3P01034 146 aaPredicted RBP7.68□□□□□ -1.18
SMC4-218ENST00000486711 GRK4P32298 578 aa7.68□□□□□ -1.18
SMC4-218ENST00000486711 AFMP43652 599 aa7.68□□□□□ -1.18
SMC4-218ENST00000486711 CDK8P49336 464 aa7.68□□□□□ -1.18
SMC4-218ENST00000486711 RBM25P49756 843 aaKnown RBP7.68□□□□□ -1.18
SMC4-218ENST00000486711 SEPT6Q14141 434 aa7.68□□□□□ -1.18
SMC4-218ENST00000486711 KSR1Q8IVT5 923 aa7.68□□□□□ -1.18
SMC4-218ENST00000486711 SLC38A3Q99624 504 aa7.68□□□□□ -1.18
SMC4-218ENST00000486711 CARS2Q9HA77 564 aaKnown RBP7.68□□□□□ -1.18
SMC4-218ENST00000486711 CYP7A1P22680 504 aa7.67□□□□□ -1.18
SMC4-218ENST00000486711 EAPPQ56P03 285 aaPredicted RBP7.67□□□□□ -1.18
SMC4-218ENST00000486711 CDKAL1Q5VV42 579 aa7.67□□□□□ -1.18
SMC4-218ENST00000486711 PRAMEF13Q5VWM6 474 aa7.67□□□□□ -1.18
SMC4-218ENST00000486711 DNAJC14Q6Y2X3 702 aaPredicted RBP7.67□□□□□ -1.18
SMC4-218ENST00000486711 AGMOQ6ZNB7 445 aa7.67□□□□□ -1.18
SMC4-218ENST00000486711 NPAS4Q8IUM7 802 aa7.67□□□□□ -1.18
SMC4-218ENST00000486711 DUSP9Q99956 384 aaKnown RBP7.67□□□□□ -1.18
SMC4-218ENST00000486711 ATP13A1Q9HD20 1204 aa7.67□□□□□ -1.18
SMC4-218ENST00000486711 PCDHB5Q9Y5E4 795 aa7.67□□□□□ -1.18
SMC4-218ENST00000486711 CAPN6Q9Y6Q1 641 aa7.67□□□□□ -1.18
SMC4-218ENST00000486711 H3BS24 57 aa7.66□□□□□ -1.18
SMC4-218ENST00000486711 KIR3DL1P43629 444 aa7.66□□□□□ -1.18
SMC4-218ENST00000486711 LIG3P49916 1009 aa7.66□□□□□ -1.18
SMC4-218ENST00000486711 THAP5Q7Z6K1 395 aa7.66□□□□□ -1.18
SMC4-218ENST00000486711 MIR1-1HGQ9H1L0 117 aa7.66□□□□□ -1.18
SMC4-218ENST00000486711 ST14Q9Y5Y6 855 aa7.66□□□□□ -1.18
SMC4-218ENST00000486711 ANKRD33BA6NCL7 494 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 LRRC10BA6NIK2 292 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 DBX1A6NMT0 343 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 GFRA2O00451 464 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 ZNF124Q15973 351 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 MAP3K11Q16584 847 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 RIN3Q8TB24 985 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 XAGE3Q8WTP9 111 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 CCDC120Q96HB5 630 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 FAM84AQ96KN4 292 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 CNTNAP4Q9C0A0 1308 aa7.65□□□□□ -1.18
SMC4-218ENST00000486711 CBX7O95931 251 aa7.64□□□□□ -1.19
SMC4-218ENST00000486711 PGRP06401 933 aa7.64□□□□□ -1.19
SMC4-218ENST00000486711 RLBP1P12271 317 aa7.64□□□□□ -1.19
SMC4-218ENST00000486711 PDE4BQ07343 736 aa7.64□□□□□ -1.19
SMC4-218ENST00000486711 DIEXFQ68CQ4 756 aaKnown RBP7.64□□□□□ -1.19
SMC4-218ENST00000486711 MRPL41Q8IXM3 137 aaKnown RBP7.64□□□□□ -1.19
SMC4-218ENST00000486711 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.64□□□□□ -1.19
SMC4-218ENST00000486711 ZNF503-AS2A6NEH8 195 aa7.63□□□□□ -1.19
SMC4-218ENST00000486711 MLANAQ16655 118 aa7.63□□□□□ -1.19
SMC4-218ENST00000486711 TSNAXIP1Q2TAA8 658 aa7.63□□□□□ -1.19
SMC4-218ENST00000486711 SLC6A19Q695T7 634 aa7.63□□□□□ -1.19
SMC4-218ENST00000486711 BHLHE22Q8NFJ8 381 aaPredicted RBP7.63□□□□□ -1.19
SMC4-218ENST00000486711 KIRREL1Q96J84 757 aa7.63□□□□□ -1.19
SMC4-218ENST00000486711 BCL2L13Q9BXK5 485 aa7.63□□□□□ -1.19
SMC4-218ENST00000486711 TJP2Q9UDY2 1190 aa7.63□□□□□ -1.19
SMC4-218ENST00000486711 GLI1P08151 1106 aa7.62□□□□□ -1.19
SMC4-218ENST00000486711 GDNFP39905 211 aa7.62□□□□□ -1.19
SMC4-218ENST00000486711 ETV3P41162 512 aa7.62□□□□□ -1.19
SMC4-218ENST00000486711 RPL6Q02878 288 aaKnown RBP7.62□□□□□ -1.19
SMC4-218ENST00000486711 MESP2Q0VG99 397 aa7.62□□□□□ -1.19
SMC4-218ENST00000486711 MEI1Q5TIA1 1274 aa7.62□□□□□ -1.19
SMC4-218ENST00000486711 TMEM87BQ96K49 555 aa7.62□□□□□ -1.19
SMC4-218ENST00000486711 RNF19AQ9NV58 838 aa7.62□□□□□ -1.19
SMC4-218ENST00000486711 E9PSI1 815 aa7.61□□□□□ -1.19
SMC4-218ENST00000486711 TFE3P19532 575 aaPredicted RBP7.61□□□□□ -1.19
SMC4-218ENST00000486711 ST13P50502 369 aaKnown RBP7.61□□□□□ -1.19
SMC4-218ENST00000486711 FYB2Q5VWT5 728 aa7.61□□□□□ -1.19
SMC4-218ENST00000486711 CDH24Q86UP0 819 aa7.61□□□□□ -1.19
SMC4-218ENST00000486711 PIWIL2Q8TC59 973 aaKnown RBP7.61□□□□□ -1.19
SMC4-218ENST00000486711 UBE2FQ969M7 185 aa7.61□□□□□ -1.19
SMC4-218ENST00000486711 ALPK1Q96QP1 1244 aa7.61□□□□□ -1.19
SMC4-218ENST00000486711 DPH2Q9BQC3 489 aaPredicted RBP7.61□□□□□ -1.19
SMC4-218ENST00000486711 NOC4LQ9BVI4 516 aaKnown RBP7.61□□□□□ -1.19
SMC4-218ENST00000486711 BCL11AQ9H165 835 aa7.61□□□□□ -1.19
SMC4-218ENST00000486711 ADAM30Q9UKF2 790 aa7.61□□□□□ -1.19
SMC4-218ENST00000486711 RBM47A0AV96 593 aaKnown RBP7.6□□□□□ -1.19
SMC4-218ENST00000486711 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.6□□□□□ -1.19
SMC4-218ENST00000486711 TNK2Q07912 1038 aa7.6□□□□□ -1.19
SMC4-218ENST00000486711 PSMD2Q13200 908 aa7.6□□□□□ -1.19
SMC4-218ENST00000486711 ZNF326Q5BKZ1 582 aaKnown RBP7.6□□□□□ -1.19
SMC4-218ENST00000486711 TMEM67Q5HYA8 995 aa7.6□□□□□ -1.19
SMC4-218ENST00000486711 MPZL3Q6UWV2 235 aa7.6□□□□□ -1.19
SMC4-218ENST00000486711 MCATQ8IVS2 390 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms