RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 BAZ2AQ9UIF9 1905 aaKnown RBP15.17■□□□□ 0.02
HDAC6-229ENST00000486665 LAMB1P07942 1786 aa15.17■□□□□ 0.02
HDAC6-229ENST00000486665 COL2A1P02458 1487 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-229ENST00000486665 GPR25O00155 361 aa15.17■□□□□ 0.02
HDAC6-229ENST00000486665 HLA-DOAP06340 250 aa15.17■□□□□ 0.02
HDAC6-229ENST00000486665 GABPAQ06546 454 aa15.17■□□□□ 0.02
HDAC6-229ENST00000486665 LDLRAD1Q5T700 205 aa15.17■□□□□ 0.02
HDAC6-229ENST00000486665 STOX1Q6ZVD7 989 aa15.17■□□□□ 0.02
HDAC6-229ENST00000486665 METTL16Q86W50 562 aaKnown RBP15.17■□□□□ 0.02
HDAC6-229ENST00000486665 SLC44A5Q8NCS7 719 aa15.17■□□□□ 0.02
HDAC6-229ENST00000486665 NKX2-3Q8TAU0 364 aa15.17■□□□□ 0.02
HDAC6-229ENST00000486665 NAV1Q8NEY1 1877 aa15.16■□□□□ 0.02
HDAC6-229ENST00000486665 FAM196BA6NMK8 535 aa15.16■□□□□ 0.02
HDAC6-229ENST00000486665 COL9A3Q14050 684 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-229ENST00000486665 TSGA10IPQ3SY00 556 aa15.16■□□□□ 0.02
HDAC6-229ENST00000486665 MIGA2Q7L4E1 593 aa15.16■□□□□ 0.02
HDAC6-229ENST00000486665 FOXP4Q8IVH2 680 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-229ENST00000486665 AMOTL1Q8IY63 956 aa15.16■□□□□ 0.02
HDAC6-229ENST00000486665 CLMNQ96JQ2 1002 aa15.16■□□□□ 0.02
HDAC6-229ENST00000486665 DNAJC18Q9H819 358 aa15.16■□□□□ 0.02
HDAC6-229ENST00000486665 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-229ENST00000486665 ANGEL1Q9UNK9 670 aaKnown RBP15.16■□□□□ 0.02
HDAC6-229ENST00000486665 PPP2R3BQ9Y5P8 575 aa15.16■□□□□ 0.02
HDAC6-229ENST00000486665 DDX60LQ5H9U9 1706 aaKnown RBP15.16■□□□□ 0.02
HDAC6-229ENST00000486665 OTOFQ9HC10 1997 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 E7EWF7 191 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 PRDM1O75626 825 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 FGRP09769 529 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 MCCP23508 829 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 CDK8P49336 464 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 RBM25P49756 843 aaKnown RBP15.15■□□□□ 0.02
HDAC6-229ENST00000486665 MAP3K10Q02779 954 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 AKNAD1Q5T1N1 836 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 RNF20Q5VTR2 975 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 SPRYD7Q5W111 196 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 C16orf86Q6ZW13 317 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 STAG1Q8WVM7 1258 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 TBC1D32Q96NH3 1257 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 EHD4Q9H223 541 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 UPF2Q9HAU5 1272 aaKnown RBP15.15■□□□□ 0.02
HDAC6-229ENST00000486665 SERPINB13Q9UIV8 391 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.15■□□□□ 0.02
HDAC6-229ENST00000486665 MYH1P12882 1939 aa15.15■□□□□ 0.02
HDAC6-229ENST00000486665 ROBO3Q96MS0 1386 aa15.14■□□□□ 0.01
HDAC6-229ENST00000486665 CENPFP49454 3210 aa15.14■□□□□ 0.01
HDAC6-229ENST00000486665 SHMT1P34896 483 aa15.14■□□□□ 0.01
HDAC6-229ENST00000486665 NF2P35240 595 aa15.14■□□□□ 0.01
HDAC6-229ENST00000486665 RRP1BQ14684 758 aaKnown RBP15.14■□□□□ 0.01
HDAC6-229ENST00000486665 ARMC9Q7Z3E5 817 aa15.14■□□□□ 0.01
HDAC6-229ENST00000486665 CRACR2BQ8N4Y2 399 aaPredicted RBP15.14■□□□□ 0.01
HDAC6-229ENST00000486665 NEDD4P46934 1319 aa15.14■□□□□ 0.01
HDAC6-229ENST00000486665 TBC1D12O60347 775 aa15.13■□□□□ 0.01
HDAC6-229ENST00000486665 SLC3A2P08195 630 aaKnown RBP15.13■□□□□ 0.01
HDAC6-229ENST00000486665 ZKSCAN1P17029 563 aaPredicted RBP15.13■□□□□ 0.01
HDAC6-229ENST00000486665 SUPT20HL1Q3ZLR7 823 aa15.13■□□□□ 0.01
HDAC6-229ENST00000486665 MFSD6Q6ZSS7 791 aa15.13■□□□□ 0.01
HDAC6-229ENST00000486665 IL17RAQ96F46 866 aa15.13■□□□□ 0.01
HDAC6-229ENST00000486665 KIF2CQ99661 725 aa15.13■□□□□ 0.01
HDAC6-229ENST00000486665 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.13■□□□□ 0.01
HDAC6-229ENST00000486665 MKNK2Q9HBH9 465 aa15.13■□□□□ 0.01
HDAC6-229ENST00000486665 SIPA1L1O43166 1804 aa15.13■□□□□ 0.01
HDAC6-229ENST00000486665 MKI67P46013 3256 aaKnown RBP15.12■□□□□ 0.01
HDAC6-229ENST00000486665 IGF2BP3O00425 579 aaKnown RBP eCLIP15.12■□□□□ 0.01
HDAC6-229ENST00000486665 ORC4O43929 436 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 CPA1P15085 419 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 RASA1P20936 1047 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 GJA5P36382 358 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 ANAPC15P60006 121 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 JAG1P78504 1218 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 PDE4BQ07343 736 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 NOM1Q5C9Z4 860 aaKnown RBP15.12■□□□□ 0.01
HDAC6-229ENST00000486665 RRP12Q5JTH9 1297 aaKnown RBP15.12■□□□□ 0.01
HDAC6-229ENST00000486665 TATDN1Q6P1N9 297 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 JAKMIP1Q96N16 626 aaKnown RBP15.12■□□□□ 0.01
HDAC6-229ENST00000486665 CFHR5Q9BXR6 569 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 RNF41Q9H4P4 317 aaPredicted RBP15.12■□□□□ 0.01
HDAC6-229ENST00000486665 SWAP70Q9UH65 585 aa15.12■□□□□ 0.01
HDAC6-229ENST00000486665 HERC5Q9UII4 1024 aaKnown RBP15.12■□□□□ 0.01
HDAC6-229ENST00000486665 BRCA2P51587 3418 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 PHF20L1A8MW92 1017 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 B4E1Z4 1266 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 FKTNO75072 461 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 USP2O75604 605 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-229ENST00000486665 CAP1Q01518 475 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 SREBF2Q12772 1141 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 PKN2Q16513 984 aaKnown RBP15.11■□□□□ 0.01
HDAC6-229ENST00000486665 MAP3K11Q16584 847 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 SHROOM1Q2M3G4 852 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-229ENST00000486665 FAM47AQ5JRC9 791 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 FBXO46Q6PJ61 603 aaPredicted RBP15.11■□□□□ 0.01
HDAC6-229ENST00000486665 WNK4Q96J92 1243 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 NEK1Q96PY6 1258 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 TRIM34Q9BYJ4 488 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 TOMM22Q9NS69 142 aa15.11■□□□□ 0.01
HDAC6-229ENST00000486665 RANBP6O60518 1105 aaKnown RBP15.1■□□□□ 0.01
HDAC6-229ENST00000486665 PCP11498 1178 aaKnown RBP15.1■□□□□ 0.01
HDAC6-229ENST00000486665 AKR1B1P15121 316 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 KRT32Q14532 448 aa15.1■□□□□ 0.01
HDAC6-229ENST00000486665 CERKLQ49MI3 558 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms