RNA–Protein interactions for RNA: ENST00000486536.6

USP41-204, Transcript of ubiquitin specific peptidase 41, humanhuman

TSL 2

Gene USP41, Length 1,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-204ENST00000486536 EIF4A2Q14240 407 aaKnown RBP7.72□□□□□ -1.17
USP41-204ENST00000486536 GRIN2CQ14957 1233 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 SPRED3Q2MJR0 410 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 HSP90AB2PQ58FF8 381 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 ZNF772Q68DY9 489 aaPredicted RBP7.72□□□□□ -1.17
USP41-204ENST00000486536 CCDC146Q8IYE0 955 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 MRFAP1L1Q96HT8 127 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 RHOVQ96L33 236 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 EFCC1Q9HA90 598 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 DZANK1Q9NVP4 752 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 PDZRN3Q9UPQ7 1066 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 SUPT16HQ9Y5B9 1047 aaKnown RBP7.72□□□□□ -1.17
USP41-204ENST00000486536 MRVI1Q9Y6F6 885 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 ZNF521Q96K83 1311 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 MAPK8IP3Q9UPT6 1336 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 NFAT5O94916 1531 aa7.72□□□□□ -1.17
USP41-204ENST00000486536 TRPM3Q9HCF6 1732 aaPredicted RBP7.72□□□□□ -1.17
USP41-204ENST00000486536 COL16A1Q07092 1604 aaPredicted RBP7.71□□□□□ -1.17
USP41-204ENST00000486536 SHPRHQ149N8 1683 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 K7ELQ4 463 aaPredicted RBP7.71□□□□□ -1.18
USP41-204ENST00000486536 CELA3AP09093 270 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 GARTP22102 1010 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 SOX9P48436 509 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 LMNB2Q03252 620 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 SPEM2Q0P670 501 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 CAMK2GQ13555 558 aaPredicted RBP7.71□□□□□ -1.18
USP41-204ENST00000486536 COL9A2Q14055 689 aaPredicted RBP7.71□□□□□ -1.18
USP41-204ENST00000486536 EGFLAMQ63HQ2 1017 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 ANKS3Q6ZW76 656 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 ANKRD13AQ8IZ07 590 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 TCP11L2Q8N4U5 519 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 CPLX3Q8WVH0 158 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 DDX17Q92841 729 aaKnown RBP7.71□□□□□ -1.18
USP41-204ENST00000486536 MARK1Q9P0L2 795 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 STRIP2Q9ULQ0 834 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 SPATA31A6Q5VVP1 1343 aa7.71□□□□□ -1.18
USP41-204ENST00000486536 LRP6O75581 1613 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 BNIP3LO60238 219 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 ITPKAP23677 461 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 SERINC3Q13530 473 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 UBAP2LQ14157 1087 aaKnown RBP7.7□□□□□ -1.18
USP41-204ENST00000486536 NLGN1Q8N2Q7 840 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 GOLM1Q8NBJ4 401 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 BHMTQ93088 406 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 MKL1Q969V6 931 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 NXPE3Q969Y0 559 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 LRRC59Q96AG4 307 aaKnown RBP7.7□□□□□ -1.18
USP41-204ENST00000486536 SPACA7Q96KW9 195 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 NECAB3Q96P71 396 aaPredicted RBP7.7□□□□□ -1.18
USP41-204ENST00000486536 SLC30A3Q99726 388 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 NUCKS1Q9H1E3 243 aaKnown RBP7.7□□□□□ -1.18
USP41-204ENST00000486536 SEC31BQ9NQW1 1179 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 UBP1Q9NZI7 540 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 IGSF1Q8N6C5 1336 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 CPDO75976 1380 aa7.7□□□□□ -1.18
USP41-204ENST00000486536 A0A096LPE4 126 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 A0A1W2PPZ6 126 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 METTL12A8MUP2 240 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 NFKBIEO00221 500 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 MAN1A2O60476 641 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 HOXD8P13378 290 aaPredicted RBP7.69□□□□□ -1.18
USP41-204ENST00000486536 PRKAR2BP31323 418 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 TMPOP42166 694 aaKnown RBP7.69□□□□□ -1.18
USP41-204ENST00000486536 SMCPP49901 116 aaPredicted RBP7.69□□□□□ -1.18
USP41-204ENST00000486536 SNAP47Q5SQN1 464 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 SULT6B1Q6IMI4 303 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 TTBK2Q6IQ55 1244 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 AGMOQ6ZNB7 445 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
USP41-204ENST00000486536 WDR63Q8IWG1 891 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 NKD1Q969G9 470 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 HHIPQ96QV1 700 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 SIRPGQ9P1W8 387 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 HCN2Q9UL51 889 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.69□□□□□ -1.18
USP41-204ENST00000486536 ALS2Q96Q42 1657 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 KDRP35968 1356 aa7.69□□□□□ -1.18
USP41-204ENST00000486536 ABCC6O95255 1503 aa7.68□□□□□ -1.18
USP41-204ENST00000486536 AHDC1Q5TGY3 1603 aaPredicted RBP7.68□□□□□ -1.18
USP41-204ENST00000486536 PHRF1Q9P1Y6 1649 aaKnown RBP7.68□□□□□ -1.18
USP41-204ENST00000486536 H7C1W4 665 aa7.68□□□□□ -1.18
USP41-204ENST00000486536 ENC1O14682 589 aa7.68□□□□□ -1.18
USP41-204ENST00000486536 HMOX1P09601 288 aa7.68□□□□□ -1.18
USP41-204ENST00000486536 TFE3P19532 575 aaPredicted RBP7.68□□□□□ -1.18
USP41-204ENST00000486536 RXRBP28702 533 aa7.68□□□□□ -1.18
USP41-204ENST00000486536 APOBRQ0VD83 1088 aa7.68□□□□□ -1.18
USP41-204ENST00000486536 DBN1Q16643 649 aa7.68□□□□□ -1.18
USP41-204ENST00000486536 RPS26P11Q5JNZ5 115 aaPredicted RBP7.68□□□□□ -1.18
USP41-204ENST00000486536 JAZF1Q86VZ6 243 aa7.68□□□□□ -1.18
USP41-204ENST00000486536 TMEM102Q8N9M5 508 aaPredicted RBP7.68□□□□□ -1.18
USP41-204ENST00000486536 NSUN5Q96P11 429 aaKnown RBP7.68□□□□□ -1.18
USP41-204ENST00000486536 BHLHE41Q9C0J9 482 aaPredicted RBP7.68□□□□□ -1.18
USP41-204ENST00000486536 NDFIP2Q9NV92 336 aa7.68□□□□□ -1.18
USP41-204ENST00000486536 PEAK1Q9H792 1746 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 MARF1Q9Y4F3 1742 aaKnown RBP7.67□□□□□ -1.18
USP41-204ENST00000486536 LOC102724428A0A0B4J2F2 783 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 PDE2AO00408 941 aaPredicted RBP7.67□□□□□ -1.18
USP41-204ENST00000486536 KLF4O43474 513 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 NRLP54845 237 aa7.67□□□□□ -1.18
USP41-204ENST00000486536 SIK1P57059 783 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms