RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 DDAH1O94760 285 aa23.58■■□□□ 1.36
HPS3-206ENST00000486530 SASS6Q6UVJ0 657 aa23.58■■□□□ 1.36
HPS3-206ENST00000486530 RNF26Q9BY78 433 aaPredicted RBP23.58■■□□□ 1.36
HPS3-206ENST00000486530 MCM9Q9NXL9 1143 aa23.58■■□□□ 1.36
HPS3-206ENST00000486530 MKRN1Q9UHC7 482 aaKnown RBP23.58■■□□□ 1.36
HPS3-206ENST00000486530 ROBO3Q96MS0 1386 aa23.57■■□□□ 1.36
HPS3-206ENST00000486530 ALDH1B1P30837 517 aa23.57■■□□□ 1.36
HPS3-206ENST00000486530 USP5P45974 858 aa23.57■■□□□ 1.36
HPS3-206ENST00000486530 SAFBQ15424 915 aaKnown RBP eCLIP23.57■■□□□ 1.36
HPS3-206ENST00000486530 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.57■■□□□ 1.36
HPS3-206ENST00000486530 MMP1P03956 469 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 CYP2D6P10635 497 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 ZSCAN30Q86W11 494 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 MASTLQ96GX5 879 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 USP25Q9UHP3 1055 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 UBE2Q2LH0YL09 131 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 GUCY1A2P33402 732 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 CLCN1P35523 988 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 SLC39A14Q15043 492 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 DIXDC1Q155Q3 683 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 CCDC125Q86Z20 511 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 AMOTL1Q8IY63 956 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 SH3RF3Q8TEJ3 882 aaPredicted RBP23.56■■□□□ 1.36
HPS3-206ENST00000486530 CCDC39Q9UFE4 941 aa23.56■■□□□ 1.36
HPS3-206ENST00000486530 DDX60LQ5H9U9 1706 aaKnown RBP23.55■■□□□ 1.36
HPS3-206ENST00000486530 CAVIN2O95810 425 aa23.55■■□□□ 1.36
HPS3-206ENST00000486530 GRIK5Q16478 980 aa23.55■■□□□ 1.36
HPS3-206ENST00000486530 C12orf60Q5U649 245 aa23.55■■□□□ 1.36
HPS3-206ENST00000486530 TBC1D22AQ8WUA7 517 aa23.55■■□□□ 1.36
HPS3-206ENST00000486530 COL11A2P13942 1736 aaPredicted RBP23.54■■□□□ 1.36
HPS3-206ENST00000486530 EVX2Q03828 476 aa23.54■■□□□ 1.36
HPS3-206ENST00000486530 TROAPQ12815 778 aa23.54■■□□□ 1.36
HPS3-206ENST00000486530 FMR1NBQ8N0W7 255 aaPredicted RBP23.54■■□□□ 1.36
HPS3-206ENST00000486530 JMYQ8N9B5 988 aa23.54■■□□□ 1.36
HPS3-206ENST00000486530 RTFDC1Q9BY42 306 aaPredicted RBP23.54■■□□□ 1.36
HPS3-206ENST00000486530 USP17L8P0C7I0 530 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 AKAP17AQ02040 695 aaKnown RBP23.53■■□□□ 1.36
HPS3-206ENST00000486530 ANO6Q4KMQ2 910 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 NOSTRINQ8IVI9 506 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 FOXP1Q9H334 677 aaPredicted RBP23.53■■□□□ 1.36
HPS3-206ENST00000486530 QSER1Q2KHR3 1735 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 TSPY2A6NKD2 308 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 C6orf229H3BNL8 230 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 PPP6R2O75170 966 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 SLF2Q8IX21 1173 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 CMTR1Q8N1G2 835 aaKnown RBP23.53■■□□□ 1.36
HPS3-206ENST00000486530 TAOK2Q9UL54 1235 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 FOCADQ5VW36 1801 aa23.53■■□□□ 1.36
HPS3-206ENST00000486530 OLFM4Q6UX06 510 aa23.52■■□□□ 1.36
HPS3-206ENST00000486530 C2CD5Q86YS7 1000 aa23.52■■□□□ 1.36
HPS3-206ENST00000486530 DIS3L2Q8IYB7 885 aaKnown RBP23.52■■□□□ 1.36
HPS3-206ENST00000486530 CCDC82Q8N4S0 544 aa23.52■■□□□ 1.36
HPS3-206ENST00000486530 FAM205AQ6ZU69 1335 aa23.52■■□□□ 1.36
HPS3-206ENST00000486530 PRPF3O43395 683 aaKnown RBP23.51■■□□□ 1.35
HPS3-206ENST00000486530 PLCG2P16885 1265 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 XBP1P17861 261 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 FAM47AQ5JRC9 791 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 AXDND1Q5T1B0 1012 aaPredicted RBP23.51■■□□□ 1.35
HPS3-206ENST00000486530 MAP3K14Q99558 947 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 PDGFDQ9GZP0 370 aaPredicted RBP23.51■■□□□ 1.35
HPS3-206ENST00000486530 GPR75-ASB3A0A0A6YYF3 556 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 A0A1B0GVL5 298 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 ADCY5O95622 1261 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 CMA1P23946 247 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 BTDP43251 543 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 FUT2Q10981 343 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 PTPAQ15257 358 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 MFSD14BQ5SR56 506 aa23.51■■□□□ 1.35
HPS3-206ENST00000486530 NOL7Q9UMY1 257 aaKnown RBP23.51■■□□□ 1.35
HPS3-206ENST00000486530 BTBD18B2RXH4 712 aa23.5■■□□□ 1.35
HPS3-206ENST00000486530 NDUFA8P51970 172 aa23.5■■□□□ 1.35
HPS3-206ENST00000486530 STYK1Q6J9G0 422 aa23.5■■□□□ 1.35
HPS3-206ENST00000486530 TMTC3Q6ZXV5 915 aa23.5■■□□□ 1.35
HPS3-206ENST00000486530 MPNDQ8N594 471 aa23.5■■□□□ 1.35
HPS3-206ENST00000486530 CTCFLQ8NI51 663 aaPredicted RBP23.5■■□□□ 1.35
HPS3-206ENST00000486530 TGFBRAP1Q8WUH2 860 aa23.5■■□□□ 1.35
HPS3-206ENST00000486530 ZNF622Q969S3 477 aaKnown RBP eCLIP23.5■■□□□ 1.35
HPS3-206ENST00000486530 FAM163AQ96GL9 167 aaPredicted RBP23.5■■□□□ 1.35
HPS3-206ENST00000486530 KCNJ14Q9UNX9 436 aa23.5■■□□□ 1.35
HPS3-206ENST00000486530 MYH1P12882 1939 aa23.5■■□□□ 1.35
HPS3-206ENST00000486530 H0YIN7 160 aa23.49■■□□□ 1.35
HPS3-206ENST00000486530 MSNP26038 577 aaKnown RBP23.49■■□□□ 1.35
HPS3-206ENST00000486530 CCDC178Q5BJE1 867 aa23.49■■□□□ 1.35
HPS3-206ENST00000486530 CBX8Q9HC52 389 aa23.49■■□□□ 1.35
HPS3-206ENST00000486530 NMT2O60551 498 aa23.49■■□□□ 1.35
HPS3-206ENST00000486530 STX1AQ16623 288 aa23.49■■□□□ 1.35
HPS3-206ENST00000486530 COA1Q9GZY4 146 aa23.49■■□□□ 1.35
HPS3-206ENST00000486530 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.49■■□□□ 1.35
HPS3-206ENST00000486530 GAKO14976 1311 aa23.48■■□□□ 1.35
HPS3-206ENST00000486530 PLEKHA8P1O95397 391 aa23.48■■□□□ 1.35
HPS3-206ENST00000486530 PTMAP06454 111 aaKnown RBP23.48■■□□□ 1.35
HPS3-206ENST00000486530 PKN1Q16512 942 aa23.48■■□□□ 1.35
HPS3-206ENST00000486530 RILPL1Q5EBL4 403 aa23.48■■□□□ 1.35
HPS3-206ENST00000486530 WDHD1O75717 1129 aaPredicted RBP23.47■■□□□ 1.35
HPS3-206ENST00000486530 MARCKSP29966 332 aaPredicted RBP23.47■■□□□ 1.35
HPS3-206ENST00000486530 DGKHQ86XP1 1220 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 CNTNAP5Q8WYK1 1306 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 ZNF165P49910 485 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 TFAP4Q01664 338 aa23.47■■□□□ 1.35
HPS3-206ENST00000486530 RCSD1Q6JBY9 416 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms