RNA–Protein interactions for RNA: ENST00000486429.1

CLDN11-206, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 998 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-206ENST00000486429 HMGCS2P54868 508 aa22.08■■□□□ 1.13
CLDN11-206ENST00000486429 JAG1P78504 1218 aa22.08■■□□□ 1.13
CLDN11-206ENST00000486429 SHROOM1Q2M3G4 852 aaPredicted RBP22.08■■□□□ 1.13
CLDN11-206ENST00000486429 GCC1Q96CN9 775 aa22.08■■□□□ 1.13
CLDN11-206ENST00000486429 DCP1AQ9NPI6 582 aaPredicted RBP22.08■■□□□ 1.13
CLDN11-206ENST00000486429 PNMA3Q9UL41 463 aa22.08■■□□□ 1.13
CLDN11-206ENST00000486429 PTPN22Q9Y2R2 807 aa22.08■■□□□ 1.13
CLDN11-206ENST00000486429 PLCD1P51178 756 aa22.07■■□□□ 1.12
CLDN11-206ENST00000486429 MTMR2Q13614 643 aa22.07■■□□□ 1.12
CLDN11-206ENST00000486429 TREML2Q5T2D2 321 aa22.07■■□□□ 1.12
CLDN11-206ENST00000486429 TATDN1Q6P1N9 297 aa22.07■■□□□ 1.12
CLDN11-206ENST00000486429 OTUD7AQ8TE49 926 aaPredicted RBP22.07■■□□□ 1.12
CLDN11-206ENST00000486429 SMCR8Q8TEV9 937 aaPredicted RBP22.07■■□□□ 1.12
CLDN11-206ENST00000486429 GLRX3O76003 335 aaKnown RBP22.06■■□□□ 1.12
CLDN11-206ENST00000486429 GH2P01242 217 aa22.06■■□□□ 1.12
CLDN11-206ENST00000486429 MX1P20591 662 aa22.06■■□□□ 1.12
CLDN11-206ENST00000486429 SOX10P56693 466 aa22.06■■□□□ 1.12
CLDN11-206ENST00000486429 PABPC4Q13310 644 aaKnown RBP eCLIP22.06■■□□□ 1.12
CLDN11-206ENST00000486429 SH3D19Q5HYK7 790 aa22.06■■□□□ 1.12
CLDN11-206ENST00000486429 ARHGAP39Q9C0H5 1083 aa22.06■■□□□ 1.12
CLDN11-206ENST00000486429 ATP8A2Q9NTI2 1148 aa22.06■■□□□ 1.12
CLDN11-206ENST00000486429 PRKAB2O43741 272 aa22.05■■□□□ 1.12
CLDN11-206ENST00000486429 BCRP11274 1271 aa22.05■■□□□ 1.12
CLDN11-206ENST00000486429 SHMT1P34896 483 aa22.05■■□□□ 1.12
CLDN11-206ENST00000486429 BACE1P56817 501 aa22.05■■□□□ 1.12
CLDN11-206ENST00000486429 CERKLQ49MI3 558 aaPredicted RBP22.05■■□□□ 1.12
CLDN11-206ENST00000486429 ANKRD45Q5TZF3 282 aa22.05■■□□□ 1.12
CLDN11-206ENST00000486429 PI4K2BQ8TCG2 481 aa22.05■■□□□ 1.12
CLDN11-206ENST00000486429 DDRGK1Q96HY6 314 aa22.05■■□□□ 1.12
CLDN11-206ENST00000486429 PUS7LQ9H0K6 701 aaKnown RBP22.05■■□□□ 1.12
CLDN11-206ENST00000486429 TMOD4Q9NZQ9 345 aa22.05■■□□□ 1.12
CLDN11-206ENST00000486429 HTTP42858 3142 aa22.04■■□□□ 1.12
CLDN11-206ENST00000486429 GNRH1P01148 92 aa22.04■■□□□ 1.12
CLDN11-206ENST00000486429 GABPAQ06546 454 aa22.04■■□□□ 1.12
CLDN11-206ENST00000486429 ABCB5Q2M3G0 1257 aa22.04■■□□□ 1.12
CLDN11-206ENST00000486429 AMOTL1Q8IY63 956 aa22.04■■□□□ 1.12
CLDN11-206ENST00000486429 APPBP2Q92624 585 aa22.04■■□□□ 1.12
CLDN11-206ENST00000486429 USP17L10C9JJH3 530 aa22.03■■□□□ 1.12
CLDN11-206ENST00000486429 ECM2O94769 699 aaPredicted RBP22.03■■□□□ 1.12
CLDN11-206ENST00000486429 ZFYP08048 801 aaPredicted RBP22.03■■□□□ 1.12
CLDN11-206ENST00000486429 CYP2D6P10635 497 aa22.03■■□□□ 1.12
CLDN11-206ENST00000486429 LRRFIP1Q32MZ4 808 aaKnown RBP22.03■■□□□ 1.12
CLDN11-206ENST00000486429 TAOK2Q9UL54 1235 aa22.03■■□□□ 1.12
CLDN11-206ENST00000486429 SLC4A4Q9Y6R1 1079 aa22.03■■□□□ 1.12
CLDN11-206ENST00000486429 BAZ2AQ9UIF9 1905 aaKnown RBP22.03■■□□□ 1.12
CLDN11-206ENST00000486429 SALL3Q9BXA9 1300 aa22.03■■□□□ 1.12
CLDN11-206ENST00000486429 C19orf81C9J6K1 198 aa22.02■■□□□ 1.12
CLDN11-206ENST00000486429 RNF113AO15541 343 aaKnown RBP22.02■■□□□ 1.12
CLDN11-206ENST00000486429 PSMC4P43686 418 aa22.02■■□□□ 1.12
CLDN11-206ENST00000486429 PRMT2P55345 433 aa22.02■■□□□ 1.12
CLDN11-206ENST00000486429 EVX2Q03828 476 aa22.02■■□□□ 1.12
CLDN11-206ENST00000486429 EXOC6Q8TAG9 804 aa22.02■■□□□ 1.12
CLDN11-206ENST00000486429 FEZ1Q99689 392 aa22.02■■□□□ 1.12
CLDN11-206ENST00000486429 CABP5Q9NP86 173 aa22.02■■□□□ 1.12
CLDN11-206ENST00000486429 SWAP70Q9UH65 585 aa22.02■■□□□ 1.12
CLDN11-206ENST00000486429 PTCH2Q9Y6C5 1203 aa22.02■■□□□ 1.12
CLDN11-206ENST00000486429 FMNL1O95466 1100 aaPredicted RBP22.01■■□□□ 1.11
CLDN11-206ENST00000486429 OSBPP22059 807 aa22.01■■□□□ 1.11
CLDN11-206ENST00000486429 RGS19P49795 217 aa22.01■■□□□ 1.11
CLDN11-206ENST00000486429 RAB3GAP1Q15042 981 aa22.01■■□□□ 1.11
CLDN11-206ENST00000486429 TRIM47Q96LD4 638 aa22.01■■□□□ 1.11
CLDN11-206ENST00000486429 FSD1Q9BTV5 496 aa22.01■■□□□ 1.11
CLDN11-206ENST00000486429 SUPT16HQ9Y5B9 1047 aaKnown RBP22.01■■□□□ 1.11
CLDN11-206ENST00000486429 MYH8P13535 1937 aa22■■□□□ 1.11
CLDN11-206ENST00000486429 CTGFP29279 349 aa22■■□□□ 1.11
CLDN11-206ENST00000486429 FCGRTP55899 365 aa22■■□□□ 1.11
CLDN11-206ENST00000486429 IRX3P78415 501 aaPredicted RBP22■■□□□ 1.11
CLDN11-206ENST00000486429 SLC44A5Q8NCS7 719 aa22■■□□□ 1.11
CLDN11-206ENST00000486429 ARMC5Q96C12 935 aa22■■□□□ 1.11
CLDN11-206ENST00000486429 RWDD1Q9H446 243 aaPredicted RBP22■■□□□ 1.11
CLDN11-206ENST00000486429 MLLT1Q03111 559 aaPredicted RBP21.99■■□□□ 1.11
CLDN11-206ENST00000486429 SLC9C1Q4G0N8 1177 aa21.99■■□□□ 1.11
CLDN11-206ENST00000486429 USP17L2Q6R6M4 530 aa21.99■■□□□ 1.11
CLDN11-206ENST00000486429 OSBP2Q969R2 916 aa21.99■■□□□ 1.11
CLDN11-206ENST00000486429 STRBPQ96SI9 672 aaKnown RBP21.99■■□□□ 1.11
CLDN11-206ENST00000486429 ASCC2Q9H1I8 757 aaPredicted RBP21.99■■□□□ 1.11
CLDN11-206ENST00000486429 ARPP21Q9UBL0 812 aaPredicted RBP21.99■■□□□ 1.11
CLDN11-206ENST00000486429 MGAMO43451 1857 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 USP17L12C9JPN9 530 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 USP17L21D6R901 530 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 MPHOSPH10O00566 681 aaKnown RBP21.98■■□□□ 1.11
CLDN11-206ENST00000486429 HOXD10P28358 340 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 GCLCP48506 637 aaPredicted RBP21.98■■□□□ 1.11
CLDN11-206ENST00000486429 FAM110CQ1W6H9 321 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 C12orf60Q5U649 245 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 SMC5Q8IY18 1101 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 ANKRD13CQ8N6S4 541 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 DYNLL2Q96FJ2 89 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 SRRDQ9UH36 339 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 MYPNQ86TC9 1320 aa21.98■■□□□ 1.11
CLDN11-206ENST00000486429 CYP2D7A0A087X1C5 515 aa21.97■■□□□ 1.11
CLDN11-206ENST00000486429 GPAA1O43292 621 aa21.97■■□□□ 1.11
CLDN11-206ENST00000486429 HOXA7P31268 230 aaPredicted RBP21.97■■□□□ 1.11
CLDN11-206ENST00000486429 USP14P54578 494 aa21.97■■□□□ 1.11
CLDN11-206ENST00000486429 SEPT2Q15019 361 aa21.97■■□□□ 1.11
CLDN11-206ENST00000486429 ZYXQ15942 572 aaKnown RBP21.97■■□□□ 1.11
CLDN11-206ENST00000486429 C12orf42Q96LP6 360 aa21.97■■□□□ 1.11
CLDN11-206ENST00000486429 KIAA1683Q9H0B3 1180 aa21.97■■□□□ 1.11
CLDN11-206ENST00000486429 EMILIN3Q9NT22 766 aa21.97■■□□□ 1.11
CLDN11-206ENST00000486429 STAP2Q9UGK3 403 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms