RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 SENP6Q9GZR1 1112 aaPredicted RBP11.41□□□□□ -0.58
CCDC142-208ENST00000486335 SIL1Q9H173 461 aa11.41□□□□□ -0.58
CCDC142-208ENST00000486335 PA2G4Q9UQ80 394 aaKnown RBP11.41□□□□□ -0.58
CCDC142-208ENST00000486335 NEFLP07196 543 aa11.4□□□□□ -0.58
CCDC142-208ENST00000486335 ATN1P54259 1190 aaPredicted RBP11.4□□□□□ -0.58
CCDC142-208ENST00000486335 MTMR2Q13614 643 aa11.4□□□□□ -0.58
CCDC142-208ENST00000486335 METTL16Q86W50 562 aaKnown RBP11.4□□□□□ -0.58
CCDC142-208ENST00000486335 USP38Q8NB14 1042 aa11.4□□□□□ -0.58
CCDC142-208ENST00000486335 EMILIN3Q9NT22 766 aa11.4□□□□□ -0.58
CCDC142-208ENST00000486335 CEP126Q9P2H0 1117 aa11.4□□□□□ -0.58
CCDC142-208ENST00000486335 NCOR1O75376 2440 aa11.4□□□□□ -0.58
CCDC142-208ENST00000486335 PDS5AQ29RF7 1337 aaKnown RBP11.39□□□□□ -0.59
CCDC142-208ENST00000486335 MYH13Q9UKX3 1938 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 ZKSCAN1P17029 563 aaPredicted RBP11.39□□□□□ -0.59
CCDC142-208ENST00000486335 ITGB8P26012 769 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 ERVK-9P63128 1117 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 ERVK-24P63145 666 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 ALDH1L2Q3SY69 923 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 ZNF697Q5TEC3 545 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 PI16Q6UXB8 463 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 TBC1D9Q6ZT07 1266 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 SH3RF1Q7Z6J0 888 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 NPLOC4Q8TAT6 608 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 SOCS4Q8WXH5 440 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 NSUN4Q96CB9 384 aaKnown RBP11.39□□□□□ -0.59
CCDC142-208ENST00000486335 GNL3LQ9NVN8 582 aaKnown RBP11.39□□□□□ -0.59
CCDC142-208ENST00000486335 ABCF2Q9UG63 623 aa11.39□□□□□ -0.59
CCDC142-208ENST00000486335 TRIM43BA6NCK2 446 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 COL9A1P20849 921 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 MAPK4P31152 587 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 EPHB4P54760 987 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 RTP1P59025 263 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 PABPC4Q13310 644 aaKnown RBP eCLIP11.38□□□□□ -0.59
CCDC142-208ENST00000486335 PLEKHH3Q7Z736 793 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 SSH1Q8WYL5 1049 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 TRIM43Q96BQ3 446 aaPredicted RBP11.38□□□□□ -0.59
CCDC142-208ENST00000486335 TBC1D2Q9BYX2 928 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 NDUFB9Q9Y6M9 179 aa11.38□□□□□ -0.59
CCDC142-208ENST00000486335 BCAR3O75815 825 aa11.37□□□□□ -0.59
CCDC142-208ENST00000486335 RGS2P41220 211 aa11.37□□□□□ -0.59
CCDC142-208ENST00000486335 MAP2K5Q13163 448 aa11.37□□□□□ -0.59
CCDC142-208ENST00000486335 DZIP1Q86YF9 867 aaKnown RBP11.37□□□□□ -0.59
CCDC142-208ENST00000486335 TRMT44Q8IYL2 757 aaKnown RBP11.37□□□□□ -0.59
CCDC142-208ENST00000486335 BADQ92934 168 aa11.37□□□□□ -0.59
CCDC142-208ENST00000486335 APBA2Q99767 749 aa11.37□□□□□ -0.59
CCDC142-208ENST00000486335 COPRSQ9NQ92 184 aa11.37□□□□□ -0.59
CCDC142-208ENST00000486335 HMG20BQ9P0W2 317 aa11.37□□□□□ -0.59
CCDC142-208ENST00000486335 DDX20Q9UHI6 824 aaKnown RBP11.37□□□□□ -0.59
CCDC142-208ENST00000486335 SIPA1L1O43166 1804 aa11.37□□□□□ -0.59
CCDC142-208ENST00000486335 HOXC6P09630 235 aa11.36□□□□□ -0.59
CCDC142-208ENST00000486335 IL15P40933 162 aaPredicted RBP11.36□□□□□ -0.59
CCDC142-208ENST00000486335 IRX3P78415 501 aaPredicted RBP11.36□□□□□ -0.59
CCDC142-208ENST00000486335 SMAD3P84022 425 aaKnown RBP11.36□□□□□ -0.59
CCDC142-208ENST00000486335 SNX17Q15036 470 aa11.36□□□□□ -0.59
CCDC142-208ENST00000486335 SLC39A5Q6ZMH5 540 aa11.36□□□□□ -0.59
CCDC142-208ENST00000486335 ZGPATQ8N5A5 531 aaKnown RBP11.36□□□□□ -0.59
CCDC142-208ENST00000486335 SH3RF3Q8TEJ3 882 aaPredicted RBP11.36□□□□□ -0.59
CCDC142-208ENST00000486335 LPAR1Q92633 364 aa11.36□□□□□ -0.59
CCDC142-208ENST00000486335 EDC3Q96F86 508 aaKnown RBP11.36□□□□□ -0.59
CCDC142-208ENST00000486335 XAGE2Q96GT9 111 aa11.36□□□□□ -0.59
CCDC142-208ENST00000486335 LTBP2Q14767 1821 aa11.36□□□□□ -0.59
CCDC142-208ENST00000486335 MAST2Q6P0Q8 1798 aa11.36□□□□□ -0.59
CCDC142-208ENST00000486335 PTPRCP08575 1304 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 C19orf81C9J6K1 198 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 DNM1LO00429 736 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 PTPREP23469 700 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 CYP2C19P33261 490 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 PDE3AQ14432 1141 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 GRIN2CQ14957 1233 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 GJC2Q5T442 439 aaPredicted RBP11.35□□□□□ -0.59
CCDC142-208ENST00000486335 ERICH6Q7L0X2 663 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 LBHD1Q9BQE6 289 aaPredicted RBP11.35□□□□□ -0.59
CCDC142-208ENST00000486335 BTBD7Q9P203 1132 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 PI4KBQ9UBF8 816 aa11.35□□□□□ -0.59
CCDC142-208ENST00000486335 HERC5Q9UII4 1024 aaKnown RBP11.35□□□□□ -0.59
CCDC142-208ENST00000486335 A0A1B0GUL7 405 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 USP17L10C9JJH3 530 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 GDF11O95390 407 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 CYBAP13498 195 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 TFCP2Q12800 502 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 TRIM60Q495X7 471 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 SPTY2D1Q68D10 685 aaPredicted RBP11.34□□□□□ -0.59
CCDC142-208ENST00000486335 ADGRA1Q86SQ6 560 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 SLF2Q8IX21 1173 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 ARHGAP45Q92619 1136 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 PAGR1Q9BTK6 254 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 AS3MTQ9HBK9 375 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 PDLIM7Q9NR12 457 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 RABGAP1Q9Y3P9 1069 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 RLFQ13129 1914 aa11.34□□□□□ -0.59
CCDC142-208ENST00000486335 FRMPD3Q5JV73 1810 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 ATAD5Q96QE3 1844 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 SLC15A5A6NIM6 579 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 MAP4K4O95819 1239 aaPredicted RBP11.33□□□□□ -0.6
CCDC142-208ENST00000486335 ASNSP08243 561 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 FOSL2P15408 326 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 PPP4CP60510 307 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 GRB14Q14449 540 aa11.33□□□□□ -0.6
CCDC142-208ENST00000486335 CATSPERGQ6ZRH7 1159 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms