RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 TNNI2P48788 182 aa17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 ZNF157P51786 506 aaPredicted RBP17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 ANTXR2P58335 489 aa17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 CTDSPL2Q05D32 466 aa17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 PPARAQ07869 468 aa17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 SUPT20HL1Q3ZLR7 823 aa17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 MOB2Q70IA6 237 aa17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 NOL10Q9BSC4 688 aaKnown RBP17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 ATP8A2Q9NTI2 1148 aa17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 AATFQ9NY61 560 aaKnown RBP eCLIP17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 CDK5RAP2Q96SN8 1893 aa17.12■□□□□ 0.33
POLR2J3-204ENST00000486319 UBE2Q2LH0YL09 131 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 BAG3O95817 575 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 PCP11498 1178 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 SCRN1Q12765 414 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 PRKG1Q13976 671 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 ARMC9Q7Z3E5 817 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 CCDC102AQ96A19 550 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 DAGLAQ9Y4D2 1042 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 NEDD4P46934 1319 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 TCHHQ07283 1943 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 NAV1Q8NEY1 1877 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 B4E1Z4 1266 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 AOC2O75106 756 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 HSPA1AP0DMV8 641 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 HSPA1BP0DMV9 641 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 ZSCAN22P10073 491 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 PDIA3P30101 505 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 MAP2K2P36507 400 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 CACNB3P54284 484 aa17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 MAP2K1Q02750 393 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 SKOR2Q2VWA4 1001 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 NBPF12Q5TAG4 269 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 ANGEL1Q9UNK9 670 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-204ENST00000486319 MINDY4BA8MYZ0 360 aa17.1■□□□□ 0.33
POLR2J3-204ENST00000486319 PPP1R12BO60237 982 aaPredicted RBP17.1■□□□□ 0.33
POLR2J3-204ENST00000486319 PPP4CP60510 307 aa17.1■□□□□ 0.33
POLR2J3-204ENST00000486319 LARP1BQ659C4 914 aaKnown RBP17.1■□□□□ 0.33
POLR2J3-204ENST00000486319 CYB5R4Q7L1T6 521 aa17.1■□□□□ 0.33
POLR2J3-204ENST00000486319 ATP6V1DQ9Y5K8 247 aa17.1■□□□□ 0.33
POLR2J3-204ENST00000486319 KLF18A0A0U1RQI7 1052 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 SH2B2O14492 632 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 DHX16O60231 1041 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 NOGQ13253 232 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 FKBP1CQ5VVH2 108 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 MCTP1Q6DN14 999 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 CDC42EP5Q6NZY7 148 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 SMARCC2Q8TAQ2 1214 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 TMEM39BQ9GZU3 492 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 USP40Q9NVE5 1235 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 ARPP21Q9UBL0 812 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 NAP1L2Q9ULW6 460 aaPredicted RBP17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 MROH7-TTC4A0A0A0MT08 1334 aa17.09■□□□□ 0.33
POLR2J3-204ENST00000486319 FOCADQ5VW36 1801 aa17.08■□□□□ 0.33
POLR2J3-204ENST00000486319 TRAK2O60296 914 aa17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 KDM4AO75164 1064 aa17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 LIFRP42702 1097 aa17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 SART3Q15020 963 aaKnown RBP17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 SBK1Q52WX2 424 aa17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 FOXD4L5Q5VV16 416 aaPredicted RBP17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 FOXD4L4Q8WXT5 416 aaPredicted RBP17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 FAM163AQ96GL9 167 aaPredicted RBP17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 DCP1AQ9NPI6 582 aaPredicted RBP17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 WBP1LQ9NX94 342 aa17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 ZSWIM5Q9P217 1185 aa17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 FZD1Q9UP38 647 aa17.08■□□□□ 0.32
POLR2J3-204ENST00000486319 FAM155AB1AL88 458 aaPredicted RBP17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 F13A1P00488 732 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 SLC3A2P08195 630 aaKnown RBP17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 PLCG2P16885 1265 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 CCT2P78371 535 aaKnown RBP17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 CTR9Q6PD62 1173 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 FAM83AQ86UY5 434 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 FAM184AQ8NB25 1140 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 NSUN7Q8NE18 718 aaKnown RBP17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 IGDCC4Q8TDY8 1250 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 ESR2Q92731 530 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 TEPSINQ96N21 525 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 BEGAINQ9BUH8 593 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 GPHNQ9NQX3 736 aaPredicted RBP17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 TOMM22Q9NS69 142 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 MTMR6Q9Y217 621 aa17.07■□□□□ 0.32
POLR2J3-204ENST00000486319 GOLGA8BA8MQT2 603 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 SLC10A3P09131 477 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 NT5C2P49902 561 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 TMEM67Q5HYA8 995 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 RRP12Q5JTH9 1297 aaKnown RBP17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 SGMS1Q86VZ5 419 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 TACC3Q9Y6A5 838 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 GAKO14976 1311 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 PAPPA2Q9BXP8 1791 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 GPR75-ASB3A0A0A6YYF3 556 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 ERICH2A1L162 156 aa17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 VPS37CA5D8V6 355 aaPredicted RBP17.06■□□□□ 0.32
POLR2J3-204ENST00000486319 USP17L12C9JPN9 530 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms