RNA–Protein interactions for RNA: ENST00000486263.1

NELFCD-209, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 708 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-209ENST00000486263 TSPY8P0CW00 308 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 MCM5P33992 734 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 FGD1P98174 961 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 FMR1Q06787 632 aaKnown RBP eCLIP16.38■□□□□ 0.21
NELFCD-209ENST00000486263 RABEP1Q15276 862 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 CERKLQ49MI3 558 aaPredicted RBP16.38■□□□□ 0.21
NELFCD-209ENST00000486263 CDAN1Q8IWY9 1227 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 CDCA5Q96FF9 252 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 CCDC17Q96LX7 622 aa16.38■□□□□ 0.21
NELFCD-209ENST00000486263 ABT1Q9ULW3 272 aaKnown RBP16.38■□□□□ 0.21
NELFCD-209ENST00000486263 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.38■□□□□ 0.21
NELFCD-209ENST00000486263 ERICH2A1L162 156 aa16.37■□□□□ 0.21
NELFCD-209ENST00000486263 PPP1R12BO60237 982 aaPredicted RBP16.37■□□□□ 0.21
NELFCD-209ENST00000486263 FGRP09769 529 aa16.37■□□□□ 0.21
NELFCD-209ENST00000486263 TFAP4Q01664 338 aa16.37■□□□□ 0.21
NELFCD-209ENST00000486263 TTLL12Q14166 644 aaPredicted RBP16.37■□□□□ 0.21
NELFCD-209ENST00000486263 SART3Q15020 963 aaKnown RBP16.37■□□□□ 0.21
NELFCD-209ENST00000486263 RUFY3Q7L099 469 aa16.37■□□□□ 0.21
NELFCD-209ENST00000486263 DHX32Q7L7V1 743 aaKnown RBP16.37■□□□□ 0.21
NELFCD-209ENST00000486263 SAPCD2Q86UD0 394 aa16.37■□□□□ 0.21
NELFCD-209ENST00000486263 METTL16Q86W50 562 aaKnown RBP16.37■□□□□ 0.21
NELFCD-209ENST00000486263 IQCA1Q86XH1 822 aa16.37■□□□□ 0.21
NELFCD-209ENST00000486263 ZNF341Q9BYN7 854 aa16.37■□□□□ 0.21
NELFCD-209ENST00000486263 CABP5Q9NP86 173 aa16.37■□□□□ 0.21
NELFCD-209ENST00000486263 RASA1P20936 1047 aa16.36■□□□□ 0.21
NELFCD-209ENST00000486263 RPS6KB1P23443 525 aa16.36■□□□□ 0.21
NELFCD-209ENST00000486263 SHMT1P34896 483 aa16.36■□□□□ 0.21
NELFCD-209ENST00000486263 NEK4P51957 841 aa16.36■□□□□ 0.21
NELFCD-209ENST00000486263 PRKG1Q13976 671 aa16.36■□□□□ 0.21
NELFCD-209ENST00000486263 FAM47AQ5JRC9 791 aa16.36■□□□□ 0.21
NELFCD-209ENST00000486263 UBAC1Q9BSL1 405 aa16.36■□□□□ 0.21
NELFCD-209ENST00000486263 UPF3BQ9BZI7 483 aaKnown RBP16.36■□□□□ 0.21
NELFCD-209ENST00000486263 ZSWIM6Q9HCJ5 1215 aa16.36■□□□□ 0.21
NELFCD-209ENST00000486263 TACC3Q9Y6A5 838 aa16.36■□□□□ 0.21
NELFCD-209ENST00000486263 PRC1O43663 620 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 ST18O60284 1047 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 SLURP2P0DP57 97 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 ECE1P42892 770 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 VEGFBP49765 207 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 ABCB5Q2M3G0 1257 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 CCDC178Q5BJE1 867 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 TATDN1Q6P1N9 297 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 CHST3Q7LGC8 479 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 MB21D2Q8IYB1 491 aaPredicted RBP16.35■□□□□ 0.21
NELFCD-209ENST00000486263 IL27Q8NEV9 243 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 IL17RAQ96F46 866 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 DNAJC18Q9H819 358 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 ZNF408Q9H9D4 720 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 PDRG1Q9NUG6 133 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 ZSWIM5Q9P217 1185 aa16.35■□□□□ 0.21
NELFCD-209ENST00000486263 PCNTO95613 3336 aa16.34■□□□□ 0.21
NELFCD-209ENST00000486263 IFIT3O14879 490 aaKnown RBP16.34■□□□□ 0.21
NELFCD-209ENST00000486263 CPA1P15085 419 aa16.34■□□□□ 0.21
NELFCD-209ENST00000486263 IREB2P48200 963 aaKnown RBP16.34■□□□□ 0.21
NELFCD-209ENST00000486263 FKBP1BP68106 108 aa16.34■□□□□ 0.21
NELFCD-209ENST00000486263 MAP3K10Q02779 954 aa16.34■□□□□ 0.21
NELFCD-209ENST00000486263 DLK2Q6UY11 383 aa16.34■□□□□ 0.21
NELFCD-209ENST00000486263 C2orf69Q8N8R5 385 aa16.34■□□□□ 0.21
NELFCD-209ENST00000486263 KIF2CQ99661 725 aa16.34■□□□□ 0.21
NELFCD-209ENST00000486263 GBA2Q9HCG7 927 aaPredicted RBP16.34■□□□□ 0.21
NELFCD-209ENST00000486263 GDF11O95390 407 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 AKR1B1P15121 316 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 TMEM67Q5HYA8 995 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 PPP4R3BQ5MIZ7 849 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 CYB5R4Q7L1T6 521 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 ARMC9Q7Z3E5 817 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 NEDD1Q8NHV4 660 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 TMEM87BQ96K49 555 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 WRNIP1Q96S55 665 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 ZSCAN10Q96SZ4 725 aaPredicted RBP16.33■□□□□ 0.2
NELFCD-209ENST00000486263 ZKSCAN3Q9BRR0 538 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 WDR19Q8NEZ3 1342 aa16.33■□□□□ 0.2
NELFCD-209ENST00000486263 CTNND1O60716 968 aaKnown RBP16.32■□□□□ 0.2
NELFCD-209ENST00000486263 CAP2P40123 477 aa16.32■□□□□ 0.2
NELFCD-209ENST00000486263 EXOSC10Q01780 885 aaKnown RBP16.32■□□□□ 0.2
NELFCD-209ENST00000486263 RAB3GAP1Q15042 981 aa16.32■□□□□ 0.2
NELFCD-209ENST00000486263 ANKRD1Q15327 319 aa16.32■□□□□ 0.2
NELFCD-209ENST00000486263 NFXL1Q6ZNB6 911 aa16.32■□□□□ 0.2
NELFCD-209ENST00000486263 Q6ZUG5 572 aa16.32■□□□□ 0.2
NELFCD-209ENST00000486263 TMEM179Q6ZVK1 233 aa16.32■□□□□ 0.2
NELFCD-209ENST00000486263 TCEANC2Q96MN5 208 aa16.32■□□□□ 0.2
NELFCD-209ENST00000486263 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
NELFCD-209ENST00000486263 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
NELFCD-209ENST00000486263 ANGEL1Q9UNK9 670 aaKnown RBP16.32■□□□□ 0.2
NELFCD-209ENST00000486263 USP2O75604 605 aaPredicted RBP16.31■□□□□ 0.2
NELFCD-209ENST00000486263 GH2P01242 217 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 ASNSP08243 561 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 HUNKP57058 714 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 ATP2B2Q01814 1243 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 WTAPQ15007 396 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 TMTC2Q8N394 836 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 CAPNS2Q96L46 248 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 MTA3Q9BTC8 594 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 PICK1Q9NRD5 415 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 TSHZ2Q9NRE2 1034 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 GINM1Q9NU53 330 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 TCP11L1Q9NUJ3 509 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
NELFCD-209ENST00000486263 SIPA1L1O43166 1804 aa16.31■□□□□ 0.2
NELFCD-209ENST00000486263 TNKSO95271 1327 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms