RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 PLEKHH3Q7Z736 793 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 WDR66Q8TBY9 1149 aa12.19□□□□□ -0.46
PTPN7-213ENST00000486116 TSR2Q969E8 191 aaKnown RBP12.19□□□□□ -0.46
PTPN7-213ENST00000486116 CXXC1Q9P0U4 656 aaPredicted RBP12.19□□□□□ -0.46
PTPN7-213ENST00000486116 CACNA1AO00555 2505 aa12.18□□□□□ -0.46
PTPN7-213ENST00000486116 ZNF236Q9UL36 1845 aa12.18□□□□□ -0.46
PTPN7-213ENST00000486116 F6X3S4 739 aa12.18□□□□□ -0.46
PTPN7-213ENST00000486116 FGFR2P21802 821 aa12.18□□□□□ -0.46
PTPN7-213ENST00000486116 HOXA7P31268 230 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-213ENST00000486116 TFF2Q03403 129 aa12.18□□□□□ -0.46
PTPN7-213ENST00000486116 TWISTNBQ3B726 338 aaPredicted RBP12.18□□□□□ -0.46
PTPN7-213ENST00000486116 MFSD14CQ5VZR4 134 aa12.18□□□□□ -0.46
PTPN7-213ENST00000486116 KAZALD1Q96I82 304 aa12.18□□□□□ -0.46
PTPN7-213ENST00000486116 PBX4Q9BYU1 374 aa12.18□□□□□ -0.46
PTPN7-213ENST00000486116 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
PTPN7-213ENST00000486116 TRANK1O15050 2925 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 GAKO14976 1311 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 CDK5RAP2Q96SN8 1893 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 TBC1D12O60347 775 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 IGHA2P01877 340 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 CYP2C19P33261 490 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 MRE11P49959 708 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 KCNQ1P51787 676 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 TLE2Q04725 743 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 FPGSQ05932 587 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 PICALMQ13492 652 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 WDR43Q15061 677 aaKnown RBP eCLIP12.17□□□□□ -0.46
PTPN7-213ENST00000486116 C1orf53Q5VUE5 145 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 EDC3Q96F86 508 aaKnown RBP12.17□□□□□ -0.46
PTPN7-213ENST00000486116 TBC1D2Q9BYX2 928 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 OSBPL5Q9H0X9 879 aaPredicted RBP12.17□□□□□ -0.46
PTPN7-213ENST00000486116 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
PTPN7-213ENST00000486116 FAM86C2PA6NEL3 165 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 GRXCR1A8MXD5 290 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 APAF1O14727 1248 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 KIAA0355O15063 1070 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 GPR37L1O60883 481 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 LDHBP07195 334 aaKnown RBP12.16□□□□□ -0.46
PTPN7-213ENST00000486116 CYBAP13498 195 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 IGFBP4P22692 258 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 ZEB1P37275 1124 aaPredicted RBP12.16□□□□□ -0.46
PTPN7-213ENST00000486116 ADCYAP1R1P41586 468 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 MTMR2Q13614 643 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 ANO1Q5XXA6 986 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 ARRDC4Q8NCT1 418 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 KHSRPQ92945 711 aaKnown RBP eCLIP12.16□□□□□ -0.46
PTPN7-213ENST00000486116 FERMT2Q96AC1 680 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 SUCLG2Q96I99 432 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 PAGR1Q9BTK6 254 aa12.16□□□□□ -0.46
PTPN7-213ENST00000486116 USP17L5A8MUK1 530 aa12.15□□□□□ -0.46
PTPN7-213ENST00000486116 CLTBP09497 229 aa12.15□□□□□ -0.46
PTPN7-213ENST00000486116 CAP2P40123 477 aa12.15□□□□□ -0.46
PTPN7-213ENST00000486116 CCAR1Q8IX12 1150 aaKnown RBP12.15□□□□□ -0.46
PTPN7-213ENST00000486116 NPLOC4Q8TAT6 608 aa12.15□□□□□ -0.46
PTPN7-213ENST00000486116 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTPN7-213ENST00000486116 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.15□□□□□ -0.46
PTPN7-213ENST00000486116 TACC3Q9Y6A5 838 aa12.15□□□□□ -0.46
PTPN7-213ENST00000486116 SALL1Q9NSC2 1324 aa12.14□□□□□ -0.47
PTPN7-213ENST00000486116 ZNFX1Q9P2E3 1918 aaKnown RBP12.14□□□□□ -0.47
PTPN7-213ENST00000486116 CNMDO75829 334 aa12.14□□□□□ -0.47
PTPN7-213ENST00000486116 HOXC6P09630 235 aa12.14□□□□□ -0.47
PTPN7-213ENST00000486116 IFIT1P09914 478 aaKnown RBP12.14□□□□□ -0.47
PTPN7-213ENST00000486116 RAG1P15918 1043 aa12.14□□□□□ -0.47
PTPN7-213ENST00000486116 BACE1P56817 501 aa12.14□□□□□ -0.47
PTPN7-213ENST00000486116 ATP2B2Q01814 1243 aa12.14□□□□□ -0.47
PTPN7-213ENST00000486116 RALBP1Q15311 655 aa12.14□□□□□ -0.47
PTPN7-213ENST00000486116 PUM3Q15397 648 aaKnown RBP12.14□□□□□ -0.47
PTPN7-213ENST00000486116 KLHDC4Q8TBB5 520 aa12.14□□□□□ -0.47
PTPN7-213ENST00000486116 FOCADQ5VW36 1801 aa12.14□□□□□ -0.47
PTPN7-213ENST00000486116 MYBBP1AQ9BQG0 1328 aaKnown RBP12.13□□□□□ -0.47
PTPN7-213ENST00000486116 PRRC2BQ5JSZ5 2229 aaKnown RBP12.13□□□□□ -0.47
PTPN7-213ENST00000486116 SLC15A5A6NIM6 579 aa12.13□□□□□ -0.47
PTPN7-213ENST00000486116 MYCNP04198 464 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-213ENST00000486116 PTPREP23469 700 aa12.13□□□□□ -0.47
PTPN7-213ENST00000486116 LRRC41Q15345 812 aa12.13□□□□□ -0.47
PTPN7-213ENST00000486116 RASIP1Q5U651 963 aa12.13□□□□□ -0.47
PTPN7-213ENST00000486116 CCDC129Q6ZRS4 1044 aa12.13□□□□□ -0.47
PTPN7-213ENST00000486116 WDR18Q9BV38 432 aa12.13□□□□□ -0.47
PTPN7-213ENST00000486116 AS3MTQ9HBK9 375 aa12.13□□□□□ -0.47
PTPN7-213ENST00000486116 CWC22Q9HCG8 908 aaKnown RBP12.13□□□□□ -0.47
PTPN7-213ENST00000486116 C9orf78Q9NZ63 289 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-213ENST00000486116 TMOD4Q9NZQ9 345 aa12.13□□□□□ -0.47
PTPN7-213ENST00000486116 JAG1P78504 1218 aa12.12□□□□□ -0.47
PTPN7-213ENST00000486116 GRB14Q14449 540 aa12.12□□□□□ -0.47
PTPN7-213ENST00000486116 RABL6Q3YEC7 729 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-213ENST00000486116 C16orf59Q7L2K0 433 aa12.12□□□□□ -0.47
PTPN7-213ENST00000486116 TSPYL2Q9H2G4 693 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-213ENST00000486116 A0A0G2JMZ2 1700 aa12.11□□□□□ -0.47
PTPN7-213ENST00000486116 SEPT4O43236 478 aa12.11□□□□□ -0.47
PTPN7-213ENST00000486116 PQBP1O60828 265 aaKnown RBP12.11□□□□□ -0.47
PTPN7-213ENST00000486116 GLRX3O76003 335 aaKnown RBP12.11□□□□□ -0.47
PTPN7-213ENST00000486116 NBPF7P0C2Y1 421 aaPredicted RBP12.11□□□□□ -0.47
PTPN7-213ENST00000486116 SLC5A1P13866 664 aa12.11□□□□□ -0.47
PTPN7-213ENST00000486116 BTDP43251 543 aa12.11□□□□□ -0.47
PTPN7-213ENST00000486116 RHBDL3P58872 404 aa12.11□□□□□ -0.47
PTPN7-213ENST00000486116 AAK1Q2M2I8 961 aa12.11□□□□□ -0.47
PTPN7-213ENST00000486116 MICALL1Q8N3F8 863 aa12.11□□□□□ -0.47
PTPN7-213ENST00000486116 ANKRD44Q8N8A2 993 aa12.11□□□□□ -0.47
PTPN7-213ENST00000486116 GTF3C2Q8WUA4 911 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms