RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 SLC9C1Q4G0N8 1177 aa22.25■■□□□ 1.15
PRPF40A-209ENST00000486100 LCORLQ8N3X6 602 aa22.25■■□□□ 1.15
PRPF40A-209ENST00000486100 SRRDQ9UH36 339 aa22.25■■□□□ 1.15
PRPF40A-209ENST00000486100 USP17L10C9JJH3 530 aa22.24■■□□□ 1.15
PRPF40A-209ENST00000486100 OSBPP22059 807 aa22.24■■□□□ 1.15
PRPF40A-209ENST00000486100 MTMR2Q13614 643 aa22.24■■□□□ 1.15
PRPF40A-209ENST00000486100 SLFNL1Q499Z3 407 aa22.24■■□□□ 1.15
PRPF40A-209ENST00000486100 ZSCAN25Q6NSZ9 544 aa22.24■■□□□ 1.15
PRPF40A-209ENST00000486100 GPATCH3Q96I76 525 aa22.24■■□□□ 1.15
PRPF40A-209ENST00000486100 ARMT1Q9H993 441 aa22.24■■□□□ 1.15
PRPF40A-209ENST00000486100 DCP1AQ9NPI6 582 aaPredicted RBP22.24■■□□□ 1.15
PRPF40A-209ENST00000486100 MCM9Q9NXL9 1143 aa22.24■■□□□ 1.15
PRPF40A-209ENST00000486100 SIPA1L1O43166 1804 aa22.23■■□□□ 1.15
PRPF40A-209ENST00000486100 PHIPQ8WWQ0 1821 aa22.23■■□□□ 1.15
PRPF40A-209ENST00000486100 GH2P01242 217 aa22.23■■□□□ 1.15
PRPF40A-209ENST00000486100 FCGRTP55899 365 aa22.23■■□□□ 1.15
PRPF40A-209ENST00000486100 CERKLQ49MI3 558 aaPredicted RBP22.23■■□□□ 1.15
PRPF40A-209ENST00000486100 SDR42E1Q8WUS8 393 aa22.23■■□□□ 1.15
PRPF40A-209ENST00000486100 ZNF333Q96JL9 665 aa22.23■■□□□ 1.15
PRPF40A-209ENST00000486100 TMOD4Q9NZQ9 345 aa22.23■■□□□ 1.15
PRPF40A-209ENST00000486100 FOCADQ5VW36 1801 aa22.22■■□□□ 1.15
PRPF40A-209ENST00000486100 MBD4O95243 580 aa22.22■■□□□ 1.15
PRPF40A-209ENST00000486100 GABPAQ06546 454 aa22.22■■□□□ 1.15
PRPF40A-209ENST00000486100 CRBNQ96SW2 442 aa22.22■■□□□ 1.15
PRPF40A-209ENST00000486100 HTTP42858 3142 aa22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 CHGBP05060 677 aa22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 HOXA7P31268 230 aaPredicted RBP22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 SHMT1P34896 483 aa22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 GCLCP48506 637 aaPredicted RBP22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 ANKRD13CQ8N6S4 541 aa22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 ASCC2Q9H1I8 757 aaPredicted RBP22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 CABP5Q9NP86 173 aa22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 ATP8A2Q9NTI2 1148 aa22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 CDK5RAP2Q96SN8 1893 aa22.21■■□□□ 1.15
PRPF40A-209ENST00000486100 POTEFA5A3E0 1075 aa22.2■■□□□ 1.14
PRPF40A-209ENST00000486100 PRKAB2O43741 272 aa22.2■■□□□ 1.14
PRPF40A-209ENST00000486100 ABCB5Q2M3G0 1257 aa22.2■■□□□ 1.14
PRPF40A-209ENST00000486100 RAET1EQ8TD07 263 aa22.2■■□□□ 1.14
PRPF40A-209ENST00000486100 TMEM106CQ9BVX2 250 aa22.2■■□□□ 1.14
PRPF40A-209ENST00000486100 MYPNQ86TC9 1320 aa22.2■■□□□ 1.14
PRPF40A-209ENST00000486100 FAM110CQ1W6H9 321 aa22.19■■□□□ 1.14
PRPF40A-209ENST00000486100 USP17L2Q6R6M4 530 aa22.19■■□□□ 1.14
PRPF40A-209ENST00000486100 KBTBD3Q8NAB2 608 aa22.19■■□□□ 1.14
PRPF40A-209ENST00000486100 SH3TC2Q8TF17 1288 aa22.19■■□□□ 1.14
PRPF40A-209ENST00000486100 TAOK2Q9UL54 1235 aa22.19■■□□□ 1.14
PRPF40A-209ENST00000486100 PRKCZQ05513 592 aa22.18■■□□□ 1.14
PRPF40A-209ENST00000486100 RAB3GAP1Q15042 981 aa22.18■■□□□ 1.14
PRPF40A-209ENST00000486100 TSHZ3Q63HK5 1081 aa22.18■■□□□ 1.14
PRPF40A-209ENST00000486100 PUS7LQ9H0K6 701 aaKnown RBP22.18■■□□□ 1.14
PRPF40A-209ENST00000486100 EMILIN3Q9NT22 766 aa22.18■■□□□ 1.14
PRPF40A-209ENST00000486100 TTC41PQ6P2S7 1318 aa22.17■■□□□ 1.14
PRPF40A-209ENST00000486100 CYP2D6P10635 497 aa22.17■■□□□ 1.14
PRPF40A-209ENST00000486100 GRK4P32298 578 aa22.17■■□□□ 1.14
PRPF40A-209ENST00000486100 IRX3P78415 501 aaPredicted RBP22.17■■□□□ 1.14
PRPF40A-209ENST00000486100 EVX2Q03828 476 aa22.17■■□□□ 1.14
PRPF40A-209ENST00000486100 P2RX7Q99572 595 aaKnown RBP22.17■■□□□ 1.14
PRPF40A-209ENST00000486100 SLC4A4Q9Y6R1 1079 aa22.17■■□□□ 1.14
PRPF40A-209ENST00000486100 PTPRFP10586 1907 aa22.17■■□□□ 1.14
PRPF40A-209ENST00000486100 TNPO2O14787 897 aaKnown RBP22.16■■□□□ 1.14
PRPF40A-209ENST00000486100 GUCY1A2P33402 732 aa22.16■■□□□ 1.14
PRPF40A-209ENST00000486100 DDRGK1Q96HY6 314 aa22.16■■□□□ 1.14
PRPF40A-209ENST00000486100 C12orf42Q96LP6 360 aa22.16■■□□□ 1.14
PRPF40A-209ENST00000486100 SWAP70Q9UH65 585 aa22.16■■□□□ 1.14
PRPF40A-209ENST00000486100 GABRQQ9UN88 632 aa22.16■■□□□ 1.14
PRPF40A-209ENST00000486100 MYH1P12882 1939 aa22.16■■□□□ 1.14
PRPF40A-209ENST00000486100 ERC2O15083 957 aa22.15■■□□□ 1.14
PRPF40A-209ENST00000486100 EN2P19622 333 aaPredicted RBP22.15■■□□□ 1.14
PRPF40A-209ENST00000486100 USP14P54578 494 aa22.15■■□□□ 1.14
PRPF40A-209ENST00000486100 C12orf60Q5U649 245 aa22.15■■□□□ 1.14
PRPF40A-209ENST00000486100 FEZ1Q99689 392 aa22.15■■□□□ 1.14
PRPF40A-209ENST00000486100 KIAA1683Q9H0B3 1180 aa22.15■■□□□ 1.14
PRPF40A-209ENST00000486100 ZSWIM8A7E2V4 1837 aa22.15■■□□□ 1.14
PRPF40A-209ENST00000486100 ATAD5Q96QE3 1844 aa22.15■■□□□ 1.14
PRPF40A-209ENST00000486100 USP17L12C9JPN9 530 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 USP17L21D6R901 530 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 RNF113AO15541 343 aaKnown RBP22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 MYCP01106 439 aaPredicted RBP22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 ZFYP08048 801 aaPredicted RBP22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 FLT3LGP49771 235 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 HDAC1Q13547 482 aaPredicted RBP22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 AAMPQ13685 434 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 SEPT2Q15019 361 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 AMOTL1Q8IY63 956 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 ACER1Q8TDN7 264 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 COA7Q96BR5 231 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 DYNLL2Q96FJ2 89 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 STRBPQ96SI9 672 aaKnown RBP22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 MORF4L1Q9UBU8 362 aa22.14■■□□□ 1.13
PRPF40A-209ENST00000486100 LOC285556D6RIA3 1793 aa22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 MPHOSPH10O00566 681 aaKnown RBP22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 GLRX3O76003 335 aaKnown RBP22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 HERVK_113P62684 666 aa22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 ZYXQ15942 572 aaKnown RBP22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 ANKRD45Q5TZF3 282 aa22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 SLC44A5Q8NCS7 719 aa22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 PI4K2BQ8TCG2 481 aa22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 OTUD7AQ8TE49 926 aaPredicted RBP22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 APPBP2Q92624 585 aa22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 OSBP2Q969R2 916 aa22.13■■□□□ 1.13
PRPF40A-209ENST00000486100 GCC1Q96CN9 775 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms