RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ZSCAN29Q8IWY8 852 aaPredicted RBP16.92■□□□□ 0.3
COL9A1-207ENST00000486080 ZNF444Q8N0Y2 327 aaPredicted RBP16.92■□□□□ 0.3
COL9A1-207ENST00000486080 IL17RBQ9NRM6 502 aa16.92■□□□□ 0.3
COL9A1-207ENST00000486080 TMOD2Q9NZR1 351 aa16.92■□□□□ 0.3
COL9A1-207ENST00000486080 SERPINB13Q9UIV8 391 aa16.92■□□□□ 0.3
COL9A1-207ENST00000486080 ENTPD3O75355 529 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 CTDNEP1O95476 244 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 HLA-DOAP06340 250 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 SAMD7Q7Z3H4 446 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 MICU3Q86XE3 530 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 DHX36Q9H2U1 1008 aaKnown RBP16.91■□□□□ 0.3
COL9A1-207ENST00000486080 VEZTQ9HBM0 779 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 ZNF287Q9HBT7 754 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 SLC12A7Q9Y666 1083 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 ZBTB43O43298 467 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 PPFIA3O75145 1194 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 TBC1D10BQ4KMP7 808 aaPredicted RBP16.91■□□□□ 0.3
COL9A1-207ENST00000486080 CCDC144CPQ8IYA2 1237 aa16.91■□□□□ 0.3
COL9A1-207ENST00000486080 FAM196BA6NMK8 535 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 SHMT1P34896 483 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 GPR162Q16538 588 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 IFIT1BQ5T764 474 aaKnown RBP16.9■□□□□ 0.3
COL9A1-207ENST00000486080 C9orf131Q5VYM1 1079 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 RCSD1Q6JBY9 416 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 GPC2Q8N158 579 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 TMTC2Q8N394 836 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 NSUN7Q8NE18 718 aaKnown RBP16.9■□□□□ 0.3
COL9A1-207ENST00000486080 DNAJC18Q9H819 358 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 ZDHHC9Q9Y397 364 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 ATRNL1Q5VV63 1379 aa16.9■□□□□ 0.3
COL9A1-207ENST00000486080 MYO1BO43795 1136 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 MMP14P50281 582 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 METAP2P50579 478 aaKnown RBP eCLIP16.89■□□□□ 0.29
COL9A1-207ENST00000486080 ZNF654Q8IZM8 581 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 DDX11Q96FC9 970 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 EHD4Q9H223 541 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 PI4KBQ9UBF8 816 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 SCAF8Q9UPN6 1271 aaKnown RBP16.89■□□□□ 0.29
COL9A1-207ENST00000486080 ASTN2O75129 1339 aaPredicted RBP16.89■□□□□ 0.29
COL9A1-207ENST00000486080 CDC27P30260 824 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 ADD1P35611 737 aaKnown RBP16.89■□□□□ 0.29
COL9A1-207ENST00000486080 RAB3GAP1Q15042 981 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 FAM151AQ8WW52 585 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 LLPHQ9BRT6 129 aaKnown RBP16.89■□□□□ 0.29
COL9A1-207ENST00000486080 FAM217BQ9NTX9 383 aaPredicted RBP16.89■□□□□ 0.29
COL9A1-207ENST00000486080 SWAP70Q9UH65 585 aa16.89■□□□□ 0.29
COL9A1-207ENST00000486080 COL2A1P02458 1487 aaPredicted RBP16.88■□□□□ 0.29
COL9A1-207ENST00000486080 GOLGA8AA7E2F4 631 aa16.88■□□□□ 0.29
COL9A1-207ENST00000486080 AKR1B1P15121 316 aa16.88■□□□□ 0.29
COL9A1-207ENST00000486080 NT5C2P49902 561 aa16.88■□□□□ 0.29
COL9A1-207ENST00000486080 FOXD4L5Q5VV16 416 aaPredicted RBP16.88■□□□□ 0.29
COL9A1-207ENST00000486080 FKBP1CQ5VVH2 108 aa16.88■□□□□ 0.29
COL9A1-207ENST00000486080 SYNE3Q6ZMZ3 975 aa16.88■□□□□ 0.29
COL9A1-207ENST00000486080 CRACR2BQ8N4Y2 399 aaPredicted RBP16.88■□□□□ 0.29
COL9A1-207ENST00000486080 NEDD1Q8NHV4 660 aa16.88■□□□□ 0.29
COL9A1-207ENST00000486080 SMARCC2Q8TAQ2 1214 aa16.88■□□□□ 0.29
COL9A1-207ENST00000486080 FOXD4L4Q8WXT5 416 aaPredicted RBP16.88■□□□□ 0.29
COL9A1-207ENST00000486080 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.88■□□□□ 0.29
COL9A1-207ENST00000486080 TMEM39BQ9GZU3 492 aa16.88■□□□□ 0.29
COL9A1-207ENST00000486080 TCP11L1Q9NUJ3 509 aa16.88■□□□□ 0.29
COL9A1-207ENST00000486080 PTPDC1A2A3K4 754 aa16.87■□□□□ 0.29
COL9A1-207ENST00000486080 DDNO94850 711 aaPredicted RBP16.87■□□□□ 0.29
COL9A1-207ENST00000486080 SYT1P21579 422 aa16.87■□□□□ 0.29
COL9A1-207ENST00000486080 NUCB2P80303 420 aa16.87■□□□□ 0.29
COL9A1-207ENST00000486080 CDAN1Q8IWY9 1227 aa16.87■□□□□ 0.29
COL9A1-207ENST00000486080 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
COL9A1-207ENST00000486080 CSRNP1Q96S65 589 aa16.87■□□□□ 0.29
COL9A1-207ENST00000486080 GPRC5DQ9NZD1 345 aa16.87■□□□□ 0.29
COL9A1-207ENST00000486080 H7C1D1 291 aa16.86■□□□□ 0.29
COL9A1-207ENST00000486080 KIF4BQ2VIQ3 1234 aa16.86■□□□□ 0.29
COL9A1-207ENST00000486080 TNPO1Q92973 898 aaKnown RBP16.86■□□□□ 0.29
COL9A1-207ENST00000486080 CPLX1O14810 134 aa16.86■□□□□ 0.29
COL9A1-207ENST00000486080 DHX16O60231 1041 aaKnown RBP16.86■□□□□ 0.29
COL9A1-207ENST00000486080 EPS15P42566 896 aa16.86■□□□□ 0.29
COL9A1-207ENST00000486080 CATIPQ7Z7H3 387 aa16.86■□□□□ 0.29
COL9A1-207ENST00000486080 METTL16Q86W50 562 aaKnown RBP16.86■□□□□ 0.29
COL9A1-207ENST00000486080 DGKHQ86XP1 1220 aa16.86■□□□□ 0.29
COL9A1-207ENST00000486080 FOXP4Q8IVH2 680 aaPredicted RBP16.86■□□□□ 0.29
COL9A1-207ENST00000486080 TRPM4Q8TD43 1214 aa16.86■□□□□ 0.29
COL9A1-207ENST00000486080 ANKS1AQ92625 1134 aa16.86■□□□□ 0.29
COL9A1-207ENST00000486080 GREB1LQ9C091 1923 aaPredicted RBP16.85■□□□□ 0.29
COL9A1-207ENST00000486080 BRD1O95696 1058 aa16.85■□□□□ 0.29
COL9A1-207ENST00000486080 FDPSP14324 419 aaKnown RBP16.85■□□□□ 0.29
COL9A1-207ENST00000486080 TROAPQ12815 778 aa16.85■□□□□ 0.29
COL9A1-207ENST00000486080 SHROOM1Q2M3G4 852 aaPredicted RBP16.85■□□□□ 0.29
COL9A1-207ENST00000486080 FAM83AQ86UY5 434 aa16.85■□□□□ 0.29
COL9A1-207ENST00000486080 FANCBQ8NB91 859 aa16.85■□□□□ 0.29
COL9A1-207ENST00000486080 CEP95Q96GE4 821 aa16.85■□□□□ 0.29
COL9A1-207ENST00000486080 TRIM34Q9BYJ4 488 aa16.85■□□□□ 0.29
COL9A1-207ENST00000486080 NID2Q14112 1375 aa16.85■□□□□ 0.29
COL9A1-207ENST00000486080 STX6O43752 255 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 NTRK3Q16288 839 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 RTN1Q16799 776 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 CCDC178Q5BJE1 867 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 LARP1BQ659C4 914 aaKnown RBP16.84■□□□□ 0.29
COL9A1-207ENST00000486080 CLEC10AQ8IUN9 316 aa16.84■□□□□ 0.29
COL9A1-207ENST00000486080 CHMP4CQ96CF2 233 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms