RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 KIAA0100Q14667 2235 aaKnown RBP8.52□□□□□ -1.05
VPS50-218ENST00000485994 CDK5RAP2Q96SN8 1893 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 A0A0G2JLL6 359 aaPredicted RBP8.51□□□□□ -1.05
VPS50-218ENST00000485994 GNRH1P01148 92 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 CYP7A1P22680 504 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 CAP2P40123 477 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 CRHR2Q13324 411 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 PICALMQ13492 652 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 TAF1CQ15572 869 aaPredicted RBP8.51□□□□□ -1.05
VPS50-218ENST00000485994 FBXO46Q6PJ61 603 aaPredicted RBP8.51□□□□□ -1.05
VPS50-218ENST00000485994 C17orf99Q6UX52 265 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 PRRT2Q7Z6L0 340 aaPredicted RBP8.51□□□□□ -1.05
VPS50-218ENST00000485994 ADGRA1Q86SQ6 560 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 FAM43AQ8N2R8 423 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 HAUS7Q99871 368 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 ANTXR1Q9H6X2 564 aa8.51□□□□□ -1.05
VPS50-218ENST00000485994 AATFQ9NY61 560 aaKnown RBP eCLIP8.51□□□□□ -1.05
VPS50-218ENST00000485994 PHIPQ8WWQ0 1821 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 TCRBV5S4A2TA0A5A2 114 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 IDH1O75874 414 aaKnown RBP8.5□□□□□ -1.05
VPS50-218ENST00000485994 RRP1P56182 461 aaKnown RBP8.5□□□□□ -1.05
VPS50-218ENST00000485994 LSM11P83369 360 aaKnown RBP eCLIP8.5□□□□□ -1.05
VPS50-218ENST00000485994 SH3D19Q5HYK7 790 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 SLC9C2Q5TAH2 1124 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 GPAT2Q6NUI2 795 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 TATDN1Q6P1N9 297 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 TTC6Q86TZ1 520 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 MAGEB6Q8N7X4 407 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 TGFBRAP1Q8WUH2 860 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 RIOK1Q9BRS2 568 aaKnown RBP8.5□□□□□ -1.05
VPS50-218ENST00000485994 WDR18Q9BV38 432 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 EHD4Q9H223 541 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 PICK1Q9NRD5 415 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 PCDHB15Q9Y5E8 787 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 ZHX2Q9Y6X8 837 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 PTPRFP10586 1907 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 MYH1P12882 1939 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 FLT1P17948 1338 aa8.5□□□□□ -1.05
VPS50-218ENST00000485994 MAST2Q6P0Q8 1798 aa8.49□□□□□ -1.05
VPS50-218ENST00000485994 USP17L5A8MUK1 530 aa8.49□□□□□ -1.05
VPS50-218ENST00000485994 PRMT2P55345 433 aa8.49□□□□□ -1.05
VPS50-218ENST00000485994 DYNLL1P63167 89 aaKnown RBP8.49□□□□□ -1.05
VPS50-218ENST00000485994 UBE3CQ15386 1083 aa8.49□□□□□ -1.05
VPS50-218ENST00000485994 OTOP1Q7RTM1 612 aa8.49□□□□□ -1.05
VPS50-218ENST00000485994 PROCA1Q8NCQ7 364 aaPredicted RBP8.49□□□□□ -1.05
VPS50-218ENST00000485994 RNF25Q96BH1 459 aaPredicted RBP8.49□□□□□ -1.05
VPS50-218ENST00000485994 PAG1Q9NWQ8 432 aa8.49□□□□□ -1.05
VPS50-218ENST00000485994 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.49□□□□□ -1.05
VPS50-218ENST00000485994 HPS5Q9UPZ3 1129 aa8.49□□□□□ -1.05
VPS50-218ENST00000485994 PTPN22Q9Y2R2 807 aa8.49□□□□□ -1.05
VPS50-218ENST00000485994 DOCK3Q8IZD9 2030 aa8.49□□□□□ -1.05
VPS50-218ENST00000485994 MAGEB6P1A0A0J9YX57 407 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 CCDC85CA6NKD9 419 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 C19orf81C9J6K1 198 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 APBB1O00213 710 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 PDHXO00330 501 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 GOLIM4O00461 696 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 HLA-DOAP06340 250 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 ASNSP08243 561 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 PDE6AP16499 860 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 ADD2P35612 726 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 HDAC1Q13547 482 aaPredicted RBP8.48□□□□□ -1.05
VPS50-218ENST00000485994 ZSCAN25Q6NSZ9 544 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 TICAM2Q86XR7 235 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 MAPKAPK5Q8IW41 473 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 ZNF280CQ8ND82 737 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 BOLA2Q9H3K6 86 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 AS3MTQ9HBK9 375 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 ECHDC1Q9NTX5 307 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 PALD1Q9ULE6 856 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 NDUFB9Q9Y6M9 179 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 DOCK1Q14185 1865 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 ADGRA2Q96PE1 1338 aa8.48□□□□□ -1.05
VPS50-218ENST00000485994 PDE4DIPQ5VU43 2346 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 SLURP2P0DP57 97 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 BCRP11274 1271 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 HOXA7P31268 230 aaPredicted RBP8.47□□□□□ -1.05
VPS50-218ENST00000485994 USP5P45974 858 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 LACTBP83111 547 aaPredicted RBP8.47□□□□□ -1.05
VPS50-218ENST00000485994 GABPAQ06546 454 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 RRP1BQ14684 758 aaKnown RBP8.47□□□□□ -1.05
VPS50-218ENST00000485994 KIF22Q14807 665 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 CD99L2Q8TCZ2 262 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 GCC1Q96CN9 775 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 CRNKL1Q9BZJ0 848 aaKnown RBP8.47□□□□□ -1.05
VPS50-218ENST00000485994 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.47□□□□□ -1.05
VPS50-218ENST00000485994 DNAJC18Q9H819 358 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 ATP8A2Q9NTI2 1148 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 SERPINB13Q9UIV8 391 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 AGTPBP1Q9UPW5 1226 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 TRIM17Q9Y577 477 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 TTC41PQ6P2S7 1318 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 ZNF532Q9HCE3 1301 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 SIPA1L1O43166 1804 aa8.47□□□□□ -1.05
VPS50-218ENST00000485994 MYH7P12883 1935 aa8.46□□□□□ -1.05
VPS50-218ENST00000485994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.46□□□□□ -1.06
VPS50-218ENST00000485994 SMARCA5O60264 1052 aaPredicted RBP8.46□□□□□ -1.06
VPS50-218ENST00000485994 ZFYP08048 801 aaPredicted RBP8.46□□□□□ -1.06
VPS50-218ENST00000485994 NUDT7P0C024 238 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms