RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 AOC2O75106 756 aa28.13■■■□□ 2.09
ABCF3-216ENST00000485921 PTPRAP18433 802 aa28.13■■■□□ 2.09
ABCF3-216ENST00000485921 NOGQ13253 232 aa28.13■■■□□ 2.09
ABCF3-216ENST00000485921 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.13■■■□□ 2.09
ABCF3-216ENST00000485921 CTNNA3Q9UI47 895 aa28.13■■■□□ 2.09
ABCF3-216ENST00000485921 ANAPC4Q9UJX5 808 aa28.13■■■□□ 2.09
ABCF3-216ENST00000485921 LAMB1P07942 1786 aa28.12■■■□□ 2.09
ABCF3-216ENST00000485921 ASNSP08243 561 aa28.12■■■□□ 2.09
ABCF3-216ENST00000485921 ZBTB48P10074 688 aaPredicted RBP28.12■■■□□ 2.09
ABCF3-216ENST00000485921 CTDSPL2Q05D32 466 aa28.12■■■□□ 2.09
ABCF3-216ENST00000485921 PPATQ06203 517 aa28.12■■■□□ 2.09
ABCF3-216ENST00000485921 ABCB5Q2M3G0 1257 aa28.12■■■□□ 2.09
ABCF3-216ENST00000485921 SHROOM1Q2M3G4 852 aaPredicted RBP28.12■■■□□ 2.09
ABCF3-216ENST00000485921 MKNK2Q9HBH9 465 aa28.12■■■□□ 2.09
ABCF3-216ENST00000485921 GINM1Q9NU53 330 aa28.12■■■□□ 2.09
ABCF3-216ENST00000485921 GH2P01242 217 aa28.11■■■□□ 2.09
ABCF3-216ENST00000485921 HAND2P61296 217 aa28.11■■■□□ 2.09
ABCF3-216ENST00000485921 PPIL2Q13356 520 aa28.11■■■□□ 2.09
ABCF3-216ENST00000485921 ZIC5Q96T25 663 aa28.11■■■□□ 2.09
ABCF3-216ENST00000485921 ZNF287Q9HBT7 754 aa28.11■■■□□ 2.09
ABCF3-216ENST00000485921 ZBTB21Q9ULJ3 1066 aa28.11■■■□□ 2.09
ABCF3-216ENST00000485921 ZHX2Q9Y6X8 837 aa28.11■■■□□ 2.09
ABCF3-216ENST00000485921 DOCK1Q14185 1865 aa28.1■■■□□ 2.09
ABCF3-216ENST00000485921 CEP350Q5VT06 3117 aa28.1■■■□□ 2.09
ABCF3-216ENST00000485921 MAP2K2P36507 400 aa28.1■■■□□ 2.09
ABCF3-216ENST00000485921 PDE4BQ07343 736 aa28.1■■■□□ 2.09
ABCF3-216ENST00000485921 CCDC84Q86UT8 332 aaPredicted RBP28.1■■■□□ 2.09
ABCF3-216ENST00000485921 CCDC17Q96LX7 622 aa28.1■■■□□ 2.09
ABCF3-216ENST00000485921 CABP5Q9NP86 173 aa28.1■■■□□ 2.09
ABCF3-216ENST00000485921 MPHOSPH10O00566 681 aaKnown RBP28.09■■■□□ 2.09
ABCF3-216ENST00000485921 ZNF213O14771 459 aa28.09■■■□□ 2.09
ABCF3-216ENST00000485921 IRF6O14896 467 aa28.09■■■□□ 2.09
ABCF3-216ENST00000485921 KIF23Q02241 960 aaPredicted RBP28.09■■■□□ 2.09
ABCF3-216ENST00000485921 MAP4K1Q92918 833 aa28.09■■■□□ 2.09
ABCF3-216ENST00000485921 LSG1Q9H089 658 aaKnown RBP28.09■■■□□ 2.09
ABCF3-216ENST00000485921 ANO2Q9NQ90 1003 aa28.09■■■□□ 2.09
ABCF3-216ENST00000485921 U3KPZ7 1027 aaPredicted RBP28.09■■■□□ 2.09
ABCF3-216ENST00000485921 USP17L5A8MUK1 530 aa28.08■■■□□ 2.09
ABCF3-216ENST00000485921 PRDM1O75626 825 aa28.08■■■□□ 2.09
ABCF3-216ENST00000485921 AKR1B1P15121 316 aa28.08■■■□□ 2.09
ABCF3-216ENST00000485921 RASA1P20936 1047 aa28.08■■■□□ 2.09
ABCF3-216ENST00000485921 IMMTQ16891 758 aaKnown RBP28.08■■■□□ 2.09
ABCF3-216ENST00000485921 ZNF444Q8N0Y2 327 aaPredicted RBP28.07■■■□□ 2.08
ABCF3-216ENST00000485921 INCENPQ9NQS7 918 aa28.07■■■□□ 2.08
ABCF3-216ENST00000485921 AFG3L2Q9Y4W6 797 aa28.07■■■□□ 2.08
ABCF3-216ENST00000485921 TACC3Q9Y6A5 838 aa28.07■■■□□ 2.08
ABCF3-216ENST00000485921 ATAD5Q96QE3 1844 aa28.06■■■□□ 2.08
ABCF3-216ENST00000485921 RAB3GAP1Q15042 981 aa28.06■■■□□ 2.08
ABCF3-216ENST00000485921 TMEM179Q6ZVK1 233 aa28.06■■■□□ 2.08
ABCF3-216ENST00000485921 TBC1D2Q9BYX2 928 aa28.06■■■□□ 2.08
ABCF3-216ENST00000485921 NBPF3Q9H094 633 aa28.06■■■□□ 2.08
ABCF3-216ENST00000485921 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.06■■■□□ 2.08
ABCF3-216ENST00000485921 MANSC4A6NHS7 340 aaPredicted RBP28.05■■■□□ 2.08
ABCF3-216ENST00000485921 GUCY1A2P33402 732 aa28.05■■■□□ 2.08
ABCF3-216ENST00000485921 GTF2A2P52657 109 aa28.05■■■□□ 2.08
ABCF3-216ENST00000485921 SEPT2Q15019 361 aa28.05■■■□□ 2.08
ABCF3-216ENST00000485921 TBC1D10CQ8IV04 446 aa28.05■■■□□ 2.08
ABCF3-216ENST00000485921 AS3MTQ9HBK9 375 aa28.05■■■□□ 2.08
ABCF3-216ENST00000485921 KCNH4Q9UQ05 1017 aa28.05■■■□□ 2.08
ABCF3-216ENST00000485921 RBM8AQ9Y5S9 174 aaKnown RBP28.05■■■□□ 2.08
ABCF3-216ENST00000485921 MYH8P13535 1937 aa28.04■■■□□ 2.08
ABCF3-216ENST00000485921 FGRP09769 529 aa28.04■■■□□ 2.08
ABCF3-216ENST00000485921 SNAPC2Q13487 334 aa28.04■■■□□ 2.08
ABCF3-216ENST00000485921 AKNAD1Q5T1N1 836 aa28.04■■■□□ 2.08
ABCF3-216ENST00000485921 ZNF280CQ8ND82 737 aa28.04■■■□□ 2.08
ABCF3-216ENST00000485921 MS4A4AQ96JQ5 239 aa28.04■■■□□ 2.08
ABCF3-216ENST00000485921 TRIM75PA6NK02 468 aa28.03■■■□□ 2.08
ABCF3-216ENST00000485921 CXCL11O14625 94 aa28.03■■■□□ 2.08
ABCF3-216ENST00000485921 ORC4O43929 436 aa28.03■■■□□ 2.08
ABCF3-216ENST00000485921 SPP2Q13103 211 aa28.03■■■□□ 2.08
ABCF3-216ENST00000485921 MFSD6Q6ZSS7 791 aa28.03■■■□□ 2.08
ABCF3-216ENST00000485921 REM2Q8IYK8 340 aaPredicted RBP28.03■■■□□ 2.08
ABCF3-216ENST00000485921 STAG1Q8WVM7 1258 aa28.03■■■□□ 2.08
ABCF3-216ENST00000485921 WDR18Q9BV38 432 aa28.03■■■□□ 2.08
ABCF3-216ENST00000485921 RNF41Q9H4P4 317 aaPredicted RBP28.03■■■□□ 2.08
ABCF3-216ENST00000485921 TOMM22Q9NS69 142 aa28.03■■■□□ 2.08
ABCF3-216ENST00000485921 PCP11498 1178 aaKnown RBP28.02■■■□□ 2.08
ABCF3-216ENST00000485921 SREBF2Q12772 1141 aa28.02■■■□□ 2.08
ABCF3-216ENST00000485921 THSD7BQ9C0I4 1608 aa28.01■■■□□ 2.07
ABCF3-216ENST00000485921 CETPP11597 493 aa28.01■■■□□ 2.07
ABCF3-216ENST00000485921 INHBEP58166 350 aa28.01■■■□□ 2.07
ABCF3-216ENST00000485921 FAM47AQ5JRC9 791 aa28.01■■■□□ 2.07
ABCF3-216ENST00000485921 RRP12Q5JTH9 1297 aaKnown RBP28.01■■■□□ 2.07
ABCF3-216ENST00000485921 JMYQ8N9B5 988 aa28.01■■■□□ 2.07
ABCF3-216ENST00000485921 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.01■■■□□ 2.07
ABCF3-216ENST00000485921 PHIPQ8WWQ0 1821 aa28.01■■■□□ 2.07
ABCF3-216ENST00000485921 LAMA4Q16363 1823 aa28■■■□□ 2.07
ABCF3-216ENST00000485921 CCL15-CCL14A0A0B4J2E2 113 aa28■■■□□ 2.07
ABCF3-216ENST00000485921 TESPA1A2RU30 521 aaPredicted RBP28■■■□□ 2.07
ABCF3-216ENST00000485921 RANBP6O60518 1105 aaKnown RBP28■■■□□ 2.07
ABCF3-216ENST00000485921 CYP21A2P08686 494 aa28■■■□□ 2.07
ABCF3-216ENST00000485921 TSPY3P0CV98 308 aa28■■■□□ 2.07
ABCF3-216ENST00000485921 TSPY8P0CW00 308 aa28■■■□□ 2.07
ABCF3-216ENST00000485921 TM4SF4P48230 202 aa28■■■□□ 2.07
ABCF3-216ENST00000485921 TFAP4Q01664 338 aa28■■■□□ 2.07
ABCF3-216ENST00000485921 CCL15Q16663 113 aa28■■■□□ 2.07
ABCF3-216ENST00000485921 NEDD1Q8NHV4 660 aa27.99■■■□□ 2.07
ABCF3-216ENST00000485921 BRI3BPQ8WY22 251 aa27.99■■■□□ 2.07
ABCF3-216ENST00000485921 KANSL2Q9H9L4 492 aa27.99■■■□□ 2.07
ABCF3-216ENST00000485921 NEDD4P46934 1319 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms