RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 CYP2C8P10632 490 aa22.18■■□□□ 1.14
COL1A1-206ENST00000485870 CYP2D6P10635 497 aa22.18■■□□□ 1.14
COL1A1-206ENST00000485870 IRX6P78412 446 aaPredicted RBP22.18■■□□□ 1.14
COL1A1-206ENST00000485870 CAP1Q01518 475 aa22.18■■□□□ 1.14
COL1A1-206ENST00000485870 PARK7Q99497 189 aaKnown RBP22.18■■□□□ 1.14
COL1A1-206ENST00000485870 RNF113AO15541 343 aaKnown RBP22.17■■□□□ 1.14
COL1A1-206ENST00000485870 GH2P01242 217 aa22.17■■□□□ 1.14
COL1A1-206ENST00000485870 IGHDP01880 384 aa22.17■■□□□ 1.14
COL1A1-206ENST00000485870 HMGCS2P54868 508 aa22.17■■□□□ 1.14
COL1A1-206ENST00000485870 TATDN1Q6P1N9 297 aa22.17■■□□□ 1.14
COL1A1-206ENST00000485870 FBXO46Q6PJ61 603 aaPredicted RBP22.17■■□□□ 1.14
COL1A1-206ENST00000485870 EFCC1Q9HA90 598 aa22.17■■□□□ 1.14
COL1A1-206ENST00000485870 ATP8A2Q9NTI2 1148 aa22.17■■□□□ 1.14
COL1A1-206ENST00000485870 HPS5Q9UPZ3 1129 aa22.17■■□□□ 1.14
COL1A1-206ENST00000485870 SLC4A4Q9Y6R1 1079 aa22.17■■□□□ 1.14
COL1A1-206ENST00000485870 ADGRA2Q96PE1 1338 aa22.16■■□□□ 1.14
COL1A1-206ENST00000485870 ECM2O94769 699 aaPredicted RBP22.16■■□□□ 1.14
COL1A1-206ENST00000485870 TREML2Q5T2D2 321 aa22.16■■□□□ 1.14
COL1A1-206ENST00000485870 B4GALNT3Q6L9W6 998 aa22.16■■□□□ 1.14
COL1A1-206ENST00000485870 APPBP2Q92624 585 aa22.16■■□□□ 1.14
COL1A1-206ENST00000485870 WDR18Q9BV38 432 aa22.16■■□□□ 1.14
COL1A1-206ENST00000485870 LNPKQ9C0E8 428 aa22.16■■□□□ 1.14
COL1A1-206ENST00000485870 GINM1Q9NU53 330 aa22.16■■□□□ 1.14
COL1A1-206ENST00000485870 AGTPBP1Q9UPW5 1226 aa22.16■■□□□ 1.14
COL1A1-206ENST00000485870 LOC285556D6RIA3 1793 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 ZFYP08048 801 aaPredicted RBP22.15■■□□□ 1.14
COL1A1-206ENST00000485870 SHMT1P34896 483 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 MTMR2Q13614 643 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 CERKLQ49MI3 558 aaPredicted RBP22.15■■□□□ 1.14
COL1A1-206ENST00000485870 C17orf99Q6UX52 265 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 SMC5Q8IY18 1101 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 PROCA1Q8NCQ7 364 aaPredicted RBP22.15■■□□□ 1.14
COL1A1-206ENST00000485870 OSBP2Q969R2 916 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 DDRGK1Q96HY6 314 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 FSD1Q9BTV5 496 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 SLC45A1Q9Y2W3 748 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 ZSWIM8A7E2V4 1837 aa22.15■■□□□ 1.14
COL1A1-206ENST00000485870 LACTBP83111 547 aaPredicted RBP22.14■■□□□ 1.13
COL1A1-206ENST00000485870 GABPAQ06546 454 aa22.14■■□□□ 1.13
COL1A1-206ENST00000485870 ABCB5Q2M3G0 1257 aa22.14■■□□□ 1.13
COL1A1-206ENST00000485870 LRRFIP1Q32MZ4 808 aaKnown RBP22.14■■□□□ 1.13
COL1A1-206ENST00000485870 ARHGAP39Q9C0H5 1083 aa22.14■■□□□ 1.13
COL1A1-206ENST00000485870 CYP2D7A0A087X1C5 515 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 PDE1AP54750 535 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 BACE1P56817 501 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 KIF22Q14807 665 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 RAB3GAP1Q15042 981 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 SH3D19Q5HYK7 790 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 AMOTL1Q8IY63 956 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 SLC44A5Q8NCS7 719 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 DYNLL2Q96FJ2 89 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 STRBPQ96SI9 672 aaKnown RBP22.13■■□□□ 1.13
COL1A1-206ENST00000485870 STAP2Q9UGK3 403 aa22.13■■□□□ 1.13
COL1A1-206ENST00000485870 USP17L10C9JJH3 530 aa22.12■■□□□ 1.13
COL1A1-206ENST00000485870 USP17L12C9JPN9 530 aa22.12■■□□□ 1.13
COL1A1-206ENST00000485870 USP17L21D6R901 530 aa22.12■■□□□ 1.13
COL1A1-206ENST00000485870 M0R2C6 588 aa22.12■■□□□ 1.13
COL1A1-206ENST00000485870 ARHGEF6Q15052 776 aa22.12■■□□□ 1.13
COL1A1-206ENST00000485870 SMCR8Q8TEV9 937 aaPredicted RBP22.12■■□□□ 1.13
COL1A1-206ENST00000485870 CABP5Q9NP86 173 aa22.12■■□□□ 1.13
COL1A1-206ENST00000485870 TMOD4Q9NZQ9 345 aa22.12■■□□□ 1.13
COL1A1-206ENST00000485870 PTPN22Q9Y2R2 807 aa22.12■■□□□ 1.13
COL1A1-206ENST00000485870 SMIM22K7EJ46 135 aa22.11■■□□□ 1.13
COL1A1-206ENST00000485870 GPAA1O43292 621 aa22.11■■□□□ 1.13
COL1A1-206ENST00000485870 PNMA3Q9UL41 463 aa22.11■■□□□ 1.13
COL1A1-206ENST00000485870 HTTP42858 3142 aa22.11■■□□□ 1.13
COL1A1-206ENST00000485870 MYH8P13535 1937 aa22.11■■□□□ 1.13
COL1A1-206ENST00000485870 C19orf81C9J6K1 198 aa22.1■■□□□ 1.13
COL1A1-206ENST00000485870 MPHOSPH10O00566 681 aaKnown RBP22.1■■□□□ 1.13
COL1A1-206ENST00000485870 BCRP11274 1271 aa22.1■■□□□ 1.13
COL1A1-206ENST00000485870 C12orf60Q5U649 245 aa22.1■■□□□ 1.13
COL1A1-206ENST00000485870 CTR9Q6PD62 1173 aa22.1■■□□□ 1.13
COL1A1-206ENST00000485870 CHD1LQ86WJ1 897 aa22.1■■□□□ 1.13
COL1A1-206ENST00000485870 SWAP70Q9UH65 585 aa22.1■■□□□ 1.13
COL1A1-206ENST00000485870 GSG1L2A8MUP6 293 aa22.09■■□□□ 1.13
COL1A1-206ENST00000485870 NUCB1Q02818 461 aa22.09■■□□□ 1.13
COL1A1-206ENST00000485870 PABPC4Q13310 644 aaKnown RBP eCLIP22.09■■□□□ 1.13
COL1A1-206ENST00000485870 ZYXQ15942 572 aaKnown RBP22.09■■□□□ 1.13
COL1A1-206ENST00000485870 SEC62Q99442 399 aaKnown RBP22.09■■□□□ 1.13
COL1A1-206ENST00000485870 FEZ1Q99689 392 aa22.09■■□□□ 1.13
COL1A1-206ENST00000485870 OSBPP22059 807 aa22.08■■□□□ 1.13
COL1A1-206ENST00000485870 CTGFP29279 349 aa22.08■■□□□ 1.13
COL1A1-206ENST00000485870 GUCY1A2P33402 732 aa22.08■■□□□ 1.13
COL1A1-206ENST00000485870 PSMC4P43686 418 aa22.08■■□□□ 1.13
COL1A1-206ENST00000485870 SEPT2Q15019 361 aa22.08■■□□□ 1.13
COL1A1-206ENST00000485870 EVI5LQ96CN4 794 aa22.08■■□□□ 1.13
COL1A1-206ENST00000485870 ASCC2Q9H1I8 757 aaPredicted RBP22.08■■□□□ 1.13
COL1A1-206ENST00000485870 ARPP21Q9UBL0 812 aaPredicted RBP22.08■■□□□ 1.13
COL1A1-206ENST00000485870 FMNL1O95466 1100 aaPredicted RBP22.07■■□□□ 1.12
COL1A1-206ENST00000485870 CDK8P49336 464 aa22.07■■□□□ 1.12
COL1A1-206ENST00000485870 SOX10P56693 466 aa22.07■■□□□ 1.12
COL1A1-206ENST00000485870 ZMYM1Q5SVZ6 1142 aa22.07■■□□□ 1.12
COL1A1-206ENST00000485870 USP17L2Q6R6M4 530 aa22.07■■□□□ 1.12
COL1A1-206ENST00000485870 C16orf86Q6ZW13 317 aa22.07■■□□□ 1.12
COL1A1-206ENST00000485870 ACER1Q8TDN7 264 aa22.07■■□□□ 1.12
COL1A1-206ENST00000485870 TRIM47Q96LD4 638 aa22.07■■□□□ 1.12
COL1A1-206ENST00000485870 PTCH2Q9Y6C5 1203 aa22.07■■□□□ 1.12
COL1A1-206ENST00000485870 APPP05067 770 aa22.06■■□□□ 1.12
COL1A1-206ENST00000485870 GNAT2P19087 354 aa22.06■■□□□ 1.12
COL1A1-206ENST00000485870 TDO2P48775 406 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms