RNA–Protein interactions for RNA: ENST00000485780.1

SHROOM3-207, Transcript of shroom family member 3, humanhuman

TSL 2

Gene SHROOM3, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-207ENST00000485780 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 NACAP1Q9BZK3 213 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 SAP30BPQ9UHR5 308 aaKnown RBP11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 SERPINB13Q9UIV8 391 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 ANAPC4Q9UJX5 808 aa11.13□□□□□ -0.63
SHROOM3-207ENST00000485780 FGAP02671 866 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 CYP2D6P10635 497 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 EVX2Q03828 476 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 VGLL4Q14135 290 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 NOL9Q5SY16 702 aaKnown RBP11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 TATDN1Q6P1N9 297 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 CASC1Q6TDU7 716 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 C16orf86Q6ZW13 317 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 WRNIP1Q96S55 665 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 ZNF341Q9BYN7 854 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 NAPBQ9H115 298 aa11.12□□□□□ -0.63
SHROOM3-207ENST00000485780 GPR25O00155 361 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 POLR3DP05423 398 aaPredicted RBP11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 FGRP09769 529 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 SLURP2P0DP57 97 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 SHMT1P34896 483 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 GJA5P36382 358 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 TDO2P48775 406 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 MIGA2Q7L4E1 593 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 CTU1Q7Z7A3 348 aaKnown RBP11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 IFNL1Q8IU54 200 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 AMOTL1Q8IY63 956 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 ZNF296Q8WUU4 475 aaPredicted RBP11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 LSG1Q9H089 658 aaKnown RBP11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 SWAP70Q9UH65 585 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 LOC285556D6RIA3 1793 aa11.11□□□□□ -0.63
SHROOM3-207ENST00000485780 CASP8AP2Q9UKL3 1982 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 CYP2D7A0A087X1C5 515 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 SMIM22K7EJ46 135 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 EPB41L2O43491 1005 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 CTNND1O60716 968 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 FKTNO75072 461 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 APPP05067 770 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 GTF2A2P52657 109 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 PTH1RQ03431 593 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 PPARAQ07869 468 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 RRP1BQ14684 758 aaKnown RBP11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 OTUD5Q96G74 571 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 NBPF3Q9H094 633 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 GINM1Q9NU53 330 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 SNCAIPQ9Y6H5 919 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 PLIN4Q96Q06 1357 aa11.1□□□□□ -0.63
SHROOM3-207ENST00000485780 CCL15-CCL14A0A0B4J2E2 113 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 SPDYE5A6NIY4 337 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 FAM196BA6NMK8 535 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 IGF2BP3O00425 579 aaKnown RBP eCLIP11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 INPP5BP32019 993 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 CAP2P40123 477 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 CDK8P49336 464 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 CCL15Q16663 113 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 SLC4A8Q2Y0W8 1093 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 NOM1Q5C9Z4 860 aaKnown RBP11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 ERO1BQ86YB8 467 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 SCYL3Q8IZE3 742 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 CRACR2BQ8N4Y2 399 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 SLC44A5Q8NCS7 719 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 ZKSCAN4Q969J2 545 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 CFHR5Q9BXR6 569 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 TACC3Q9Y6A5 838 aa11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 U3KPZ7 1027 aaPredicted RBP11.09□□□□□ -0.63
SHROOM3-207ENST00000485780 MYH4Q9Y623 1939 aa11.08□□□□□ -0.64
SHROOM3-207ENST00000485780 TESPA1A2RU30 521 aaPredicted RBP11.08□□□□□ -0.64
SHROOM3-207ENST00000485780 ORC4O43929 436 aa11.08□□□□□ -0.64
SHROOM3-207ENST00000485780 PCP11498 1178 aaKnown RBP11.08□□□□□ -0.64
SHROOM3-207ENST00000485780 NT5C2P49902 561 aa11.08□□□□□ -0.64
SHROOM3-207ENST00000485780 STAG1Q8WVM7 1258 aa11.08□□□□□ -0.64
SHROOM3-207ENST00000485780 DYNLL2Q96FJ2 89 aa11.08□□□□□ -0.64
SHROOM3-207ENST00000485780 CCDC17Q96LX7 622 aa11.08□□□□□ -0.64
SHROOM3-207ENST00000485780 CTNNA3Q9UI47 895 aa11.08□□□□□ -0.64
SHROOM3-207ENST00000485780 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 REC8O95072 547 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 ASNSP08243 561 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 CETPP11597 493 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 RASA1P20936 1047 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 JAG1P78504 1218 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 CRHR2Q13324 411 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 PPIL2Q13356 520 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 SNAPC2Q13487 334 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 NECTIN1Q15223 517 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 PKN2Q16513 984 aaKnown RBP11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 KIAA1211Q6ZU35 1233 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 TBC1D10CQ8IV04 446 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 BRI3BPQ8WY22 251 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 MS4A4AQ96JQ5 239 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 TRIM34Q9BYJ4 488 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 R3HDMLQ9H3Y0 253 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 ZNF287Q9HBT7 754 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 ANO2Q9NQ90 1003 aa11.07□□□□□ -0.64
SHROOM3-207ENST00000485780 ZBTB21Q9ULJ3 1066 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms